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Select item 105264281.

Phylogenetic Analysis Guides Transporter Protein Deorphanization: A Case Study of the SLC25 Family of Mitochondrial Metabolite Transporters

Katie L. Byrne, Richard V. Szeligowski, Hongying Shen

Biomolecules. 2023 Sep; 13(9): 1314. Published online 2023 Aug 28. doi: 10.3390/biom13091314

PMCID:: PMC10526428

Abstract Article PDF–626K

Select item 75044132.

Drosophila melanogaster Mitochondrial Carriers: Similarities and Differences with the Human Carriers

Rosita Curcio, Paola Lunetti, Vincenzo Zara, Alessandra Ferramosca, Federica Marra, Giuseppe Fiermonte, Anna Rita Cappello, Francesco De Leonardis, Loredana Capobianco, Vincenza Dolce

Int J Mol Sci. 2020 Sep; 21(17): 6052. Published online 2020 Aug 22. doi: 10.3390/ijms21176052

PMCID:: PMC7504413

Abstract Article PDF–1.1M

Select item 69615783.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 67818974.

Genetic Signatures of Drug Response Variability in Drosophila melanogaster

Palle Duun Rohde, Iben Ravnborg Jensen, Pernille Merete Sarup, Michael Ørsted, Ditte Demontis, Peter Sørensen, Torsten Nygaard Kristensen

Genetics. 2019 Oct; 213(2): 633–650. Published online 2019 Aug 27. doi: 10.1534/genetics.119.302381

PMCID:: PMC6781897

Abstract Article PDF–1.4M

Select item 56890025.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 56676736.

Genetics of Alcohol Consumption in Drosophila melanogaster

Sophia Fochler, Tatiana V. Morozova, Morgan R. Davis, Alexander W. Gearhart, Wen Huang, Trudy F. C. Mackay, Robert R. H. Anholt

Genes Brain Behav. Author manuscript; available in PMC 2018 Sep 1.

Published in final edited form as: Genes Brain Behav. 2017 Sep; 16(7): 675–685. Published online 2017 Jul 21. doi: 10.1111/gbb.12399

PMCID:: PMC5667673

Abstract Article PDF–1.3M

Select item 46961527.

siRNA screen identifies QPCT as a druggable target for Huntington’s disease

Maria Jimenez-Sanchez, Wun Lam, Michael Hannus, Birte Sönnichsen, Sara Imarisio, Angeleen Fleming, Alessia Tarditi, Fiona Menzies, Teresa Ed Dami, Catherine Xu, Eduardo Gonzalez-Couto, Giulia Lazzeroni, Freddy Heitz, Daniela Diamanti, Luisa Massai, Venkata P. Satagopam, Guido Marconi, Chiara Caramelli, Arianna Nencini, Matteo Andreini, Gian Luca Sardone, Nicola P. Caradonna, Valentina Porcari, Carla Scali, Reinhard Schneider, Giuseppe Pollio, Cahir J. O’Kane, Andrea Caricasole, David C. Rubinsztein

Nat Chem Biol. Author manuscript; available in PMC 2015 Dec 30.

Published in final edited form as: Nat Chem Biol. 2015 May; 11(5): 347–354. Published online 2015 Apr 6. doi: 10.1038/nchembio.1790

PMCID:: PMC4696152

Abstract Article PDF–2.4M

Select item 45283308.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 45283299.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288710.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 353067711.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946712.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

Select item 304044113.

A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene

G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Nov 12.

Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047

PMCID:: PMC3040441

Abstract Article PDF–2.0M

Select item 291238114.

Quantitative and Molecular Genetic Analyses of Mutations Increasing Drosophila Life Span

Michael M. Magwire, Akihiko Yamamoto, Mary Anna Carbone, Natalia V. Roshina, Alexander V. Symonenko, Elena G. Pasyukova, Tatiana V. Morozova, Trudy F. C. Mackay

PLoS Genet. 2010 Jul; 6(7): e1001037. Published online 2010 Jul 29. doi: 10.1371/journal.pgen.1001037

PMCID:: PMC2912381

Abstract Article PDF–1.1M

Select item 285522115.

A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function

G. Gregory Neely, Keiji Kuba, Anthony Cammarato, Kazuya Isobe, Sabine Amann, Liyong Zhang, Mitsushige Murata, Lisa Elmén, Vaijayanti Gupta, Suchir Arora, Rinku Sarangi, Debasis Dan, Susumu Fujisawa, Takako Usami, Cui-ping Xia, Alex C. Keene, Nakissa N. Alayari, Hiroyuki Yamakawa, Ulrich Elling, Christian Berger, Maria Novatchkova, Rubina Koglgruber, Keiichi Fukuda, Hiroshi Nishina, Mitsuaki Isobe, J. Andrew Pospisilik, Yumiko Imai, Arne Pfeufer, Andrew A Hicks, Peter P. Pramstaller, Sai Subramaniam, Akinori Kimura, Karen Ocorr, Rolf Bodmer, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Apr 2.

Published in final edited form as: Cell. 2010 Apr 2; 141(1): 142–153. doi: 10.1016/j.cell.2010.02.023

PMCID:: PMC2855221

Abstract Article PDF–5.3M

Select item 282505316.

Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin

Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker

Science. Author manuscript; available in PMC 2010 Feb 19.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816

PMCID:: PMC2825053

Abstract Article PDF–858K

Select item 281928017.

The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin

Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen

Science. Author manuscript; available in PMC 2010 Feb 10.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815

Correction in:: volume 317 on page 1325

PMCID:: PMC2819280

Abstract Article PDF–1.3M

Select item 265782618.

Burst of Young Retrogenes and Independent Retrogene Formation in Mammals

Deng Pan, Liqing Zhang

PLoS One. 2009; 4(3): e5040. Published online 2009 Mar 27. doi: 10.1371/journal.pone.0005040

PMCID:: PMC2657826

Abstract Article PDF–235K

Select item 208446319.

Gene Expression Profiling Identifies FKBP39 as an Inhibitor of Autophagy in Larval Drosophila Fat Body

Gábor Juhász, László G. Puskás, Orbán Komonyi, Balázs Érdi, Péter Maróy, Thomas P. Neufeld, Miklós Sass

Cell Death Differ. Author manuscript; available in PMC 2007 Nov 21.

Published in final edited form as: Cell Death Differ. 2007 Jun; 14(6): 1181–1190. Published online 2007 Mar 16. doi: 10.1038/sj.cdd.4402123

PMCID:: PMC2084463

Abstract Article PDF–923K

Select item 183913120.

Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila

Yongsheng Bai, Claudio Casola, Cédric Feschotte, Esther Betrán

Genome Biol. 2007; 8(1): R11. Published online 2007 Jan 18. doi: 10.1186/gb-2007-8-1-r11

PMCID:: PMC1839131

Abstract Article PDF–274K

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