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Select item 95307881.

Keeping up with the condensates: The retention, gain, and loss of nuclear membrane-less organelles

Emma Lacroix, Timothy E. Audas

Front Mol Biosci. 2022; 9: 998363. Published online 2022 Sep 20. doi: 10.3389/fmolb.2022.998363

PMCID:: PMC9530788

Abstract Article PDF–1.0M

Select item 67041472.

Cytoplasmic DAXX drives SQSTM1/p62 phase condensation to activate Nrf2-mediated stress response

Yi Yang, Thea L. Willis, Robert W. Button, Conor J. Strang, Yuhua Fu, Xue Wen, Portia R. C. Grayson, Tracey Evans, Rebecca J. Sipthorpe, Sheridan L. Roberts, Bing Hu, Jianke Zhang, Boxun Lu, Shouqing Luo

Nat Commun. 2019; 10: 3759. Published online 2019 Aug 21. doi: 10.1038/s41467-019-11671-2

PMCID:: PMC6704147

Abstract Article PDF–5.3M

Select item 57078053.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890024.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 54527285.

The Drosophila DAXX-Like Protein (DLP) Cooperates with ASF1 for H3.3 Deposition and Heterochromatin Formation

Catherine Fromental-Ramain, Philippe Ramain, Ali Hamiche

Mol Cell Biol. 2017 Jun 15; 37(12): e00597-16. Prepublished online 2017 Mar 20. Published online 2017 May 31. doi: 10.1128/MCB.00597-16

PMCID:: PMC5452728

Abstract Article PDF–2.0M

Select item 45680256.

Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions

Albert J. Erives

Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1

PMCID:: PMC4568025

Abstract Article PDF–2.8M

Select item 45283307.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 45283298.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 43528879.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427152710.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 384078911.

Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster

Joshua G Dunn, Catherine K Foo, Nicolette G Belletier, Elizabeth R Gavis, Jonathan S Weissman

eLife. 2013; 2: e01179. Published online 2013 Dec 3. doi: 10.7554/eLife.01179

Correction in:: eLife. 2014; 3: e03178.

PMCID:: PMC3840789

Abstract Article PDF–4.2M

Select item 361692512.

Drosophila DJ-1 Decreases Neural Sensitivity to Stress by Negatively Regulating Daxx-Like Protein through dFOXO

Soojin Hwang, Saera Song, Yoon Ki Hong, Gahee Choi, Yoon Seok Suh, Seung Yeop Han, Minjung Lee, Seung Hwan Park, Jang Ho Lee, Soojin Lee, Se Min Bang, Yuji Jeong, Won-Ju Chung, Im-Soon Lee, Gilsang Jeong, Jongkyeong Chung, Kyoung Sang Cho

PLoS Genet. 2013 Apr; 9(4): e1003412. Published online 2013 Apr 4. doi: 10.1371/journal.pgen.1003412

PMCID:: PMC3616925

Abstract Article PDF–7.4M

Select item 353067713.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946714.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

Select item 341619915.

The SUMO Pathway Promotes Basic Helix-Loop-Helix Proneural Factor Activity via a Direct Effect on the Zn Finger Protein Senseless

Lynn M. Powell, Angela Chen, Yan Chang Huang, Pin Yao Wang, Sadie E. Kemp, Andrew P. Jarman

Mol Cell Biol. 2012 Jul; 32(14): 2849–2860. doi: 10.1128/MCB.06595-11

PMCID:: PMC3416199

Abstract Article PDF–1.4M

Select item 337100516.

Genome-Wide Association for Sensitivity to Chronic Oxidative Stress in Drosophila melanogaster

Katherine W. Jordan, Kyle L. Craver, Michael M. Magwire, Carmen E. Cubilla, Trudy F. C. Mackay, Robert R. H. Anholt

PLoS One. 2012; 7(6): e38722. Published online 2012 Jun 8. doi: 10.1371/journal.pone.0038722

PMCID:: PMC3371005

Abstract Article PDF–1.3M

Select item 325895317.

Modification of Drosophila p53 by SUMO Modulates Its Transactivation and Pro-apoptotic Functions

Federico Mauri, Laura M. McNamee, Andrea Lunardi, Fulvio Chiacchiera, Giannino Del Sal, Michael H. Brodsky, Licio Collavin

J Biol Chem. 2008 Jul 25; 283(30): 20848–20856. doi: 10.1074/jbc.M710186200

PMCID:: PMC3258953

Abstract Article PDF–478K

Select item 310200318.

Genome-wide characterization of chromatin binding and nucleosome spacing activity of the nucleosome remodelling ATPase ISWI

Anna Sala, Maria Toto, Luca Pinello, Alessandra Gabriele, Valeria Di Benedetto, Antonia M R Ingrassia, Giosuè Lo Bosco, Vito Di Gesù, Raffaele Giancarlo, Davide F V Corona

EMBO J. 2011 May 4; 30(9): 1766–1777. Published online 2011 Mar 29. doi: 10.1038/emboj.2011.98

PMCID:: PMC3102003

Abstract Article PDF–2.0M

Select item 304044119.

A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene

G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Nov 12.

Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047

PMCID:: PMC3040441

Abstract Article PDF–2.0M

Select item 297539520.

Sec61α is required for dorsal closure during Drosophila embryogenesis through its regulation of Dpp signaling

Xiaochen Wang, Robert E. Ward, IV

Dev Dyn. Author manuscript; available in PMC 2011 Mar 1.

Published in final edited form as: Dev Dyn. 2010 Mar; 239(3): 784–797. doi: 10.1002/dvdy.22219

PMCID:: PMC2975395

Abstract Article PDF–4.3M

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