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Items: 1 to 20 of 39

1.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
2.
ATP synthase interactome analysis identifies a new subunit l as a modulator of permeability transition pore in yeast
Chiranjit Panja, Aneta Wiesyk, Katarzyna Niedźwiecka, Emilia Baranowska, Roza Kucharczyk
Sci Rep. 2023; 13: 3839. Published online 2023 Mar 7. doi: 10.1038/s41598-023-30966-5
PMCID:
PMC9992712
AbstractArticlePDF–8.1M
3.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
4.
Phenotypic plasticity and a new small molecule are involved in a fungal-bacterial interaction
Andrés Andrade-Domínguez, Abigail Trejo-Hernández, Carmen Vargas-Lagunas, Sergio Encarnación-Guevara
Sci Rep. 2021; 11: 19219. Published online 2021 Sep 28. doi: 10.1038/s41598-021-98474-y
PMCID:
PMC8479133
AbstractArticlePDF–3.0M
5.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
6.
Structure of yeast cytochrome c oxidase in a supercomplex with cytochrome bc1
Andrew M. Hartley, Natalya Lukoyanova, Yunyi Zhang, Alfredo Cabrera-Orefice, Susanne Arnold, Brigitte Meunier, Nikos Pinotsis, Amandine Maréchal
Nat Struct Mol Biol. Author manuscript; available in PMC 2019 Jun 30.
Published in final edited form as: Nat Struct Mol Biol. 2019 Jan; 26(1): 78–83. Published online 2018 Dec 31. doi: 10.1038/s41594-018-0172-z
PMCID:
PMC6330080
AbstractArticlePDF–2.7M
7.
Recruitment of Cytosolic J-Proteins by TOM Receptors Promotes Mitochondrial Protein Biogenesis
Łukasz Opaliński, Jiyao Song, Chantal Priesnitz, Lena-Sophie Wenz, Silke Oeljeklaus, Bettina Warscheid, Nikolaus Pfanner, Thomas Becker
Cell Rep. 2018 Nov 20; 25(8): 2036–2043.e5. Published online 2018 Nov 20. doi: 10.1016/j.celrep.2018.10.083
PMCID:
PMC6280124
AbstractArticle
8.
The Crabtree Effect Shapes the Saccharomyces cerevisiae Lag Phase during the Switch between Different Carbon Sources
Gemma Perez-Samper, Bram Cerulus, Abbas Jariani, Lieselotte Vermeersch, Nuria Barrajón Simancas, Markus M. M. Bisschops, Joost van den Brink, Daniel Solis-Escalante, Brigida Gallone, Dries De Maeyer, Elise van Bael, Tom Wenseleers, Jan Michiels, Kathleen Marchal, Pascale Daran-Lapujade, Kevin J. Verstrepen
mBio. 2018 Sep-Oct; 9(5): e01331-18. Published online 2018 Oct 30. doi: 10.1128/mBio.01331-18
PMCID:
PMC6212832
AbstractArticlePDF–3.3M
9.
Cox2p of yeast cytochrome oxidase assembles as a stand-alone subunit with the Cox1p and Cox3p modules
Leticia Veloso R. Franco, Chen-Hsien Su, Gavin P. McStay, George J. Yu, Alexander Tzagoloff
J Biol Chem. 2018 Oct 26; 293(43): 16899–16911. Published online 2018 Sep 17. doi: 10.1074/jbc.RA118.004138
PMCID:
PMC6204888
AbstractArticlePDF–4.0M
10.
Regulation of cytochrome c oxidase activity by modulation of the catalytic site
Jacob Schäfer, Hannah Dawitz, Martin Ott, Pia Ädelroth, Peter Brzezinski
Sci Rep. 2018; 8: 11397. Published online 2018 Jul 30. doi: 10.1038/s41598-018-29567-4
PMCID:
PMC6065377
AbstractArticlePDF–1.4M
11.
Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs
Harley O’Connor Mount, Nicole M. Revie, Robert T. Todd, Kaitlin Anstett, Cathy Collins, Michael Costanzo, Charles Boone, Nicole Robbins, Anna Selmecki, Leah E. Cowen
PLoS Genet. 2018 Apr; 14(4): e1007319. Published online 2018 Apr 27. doi: 10.1371/journal.pgen.1007319
PMCID:
PMC5922528
AbstractArticlePDF–7.1M
12.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
13.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
14.
Cox16 protein is physically associated with Cox1p assembly intermediates and with cytochrome oxidase
Chen-Hsien Su, Alexander Tzagoloff
J Biol Chem. 2017 Sep 29; 292(39): 16277–16283. Published online 2017 Aug 16. doi: 10.1074/jbc.M117.801811
PMCID:
PMC5625057
AbstractArticlePDF–1.2M
15.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
16.
Caloric Restriction-Induced Extension of Chronological Lifespan Requires Intact Respiration in Budding Yeast
Young-Yon Kwon, Sung-Keun Lee, Cheol-Koo Lee
Mol Cells. 2017 Apr 30; 40(4): 307–313. Published online 2017 Apr 20. doi: 10.14348/molcells.2017.2279
PMCID:
PMC5424277
AbstractArticlePDF–853K
17.
Monitoring yeast mitochondria with peroxiredoxin-based redox probes: the influence of oxygen and glucose availability
Daniel Pastor-Flores, Katja Becker, Tobias P. Dick
Interface Focus. 2017 Apr 6; 7(2): 20160143. doi: 10.1098/rsfs.2016.0143
PMCID:
PMC5311909
AbstractArticlePDF–844K
18.
Loss of Cardiolipin Leads to Perturbation of Acetyl-CoA Synthesis
Vaishnavi Raja, Amit S. Joshi, Guiling Li, Krishna Rao Maddipati, Miriam L. Greenberg
J Biol Chem. 2017 Jan 20; 292(3): 1092–1102. Published online 2016 Dec 9. doi: 10.1074/jbc.M116.753624
PMCID:
PMC5247643
AbstractArticlePDF–1.3M
19.
Systematic identification of genes involved in metabolic acid stress resistance in yeast and their potential as cancer targets
John J. Shin, Qurratulain Aftab, Pamela Austin, Jennifer A. McQueen, Tak Poon, Shu Chen Li, Barry P. Young, Calvin D. Roskelley, Christopher J. R. Loewen
Dis Model Mech. 2016 Sep 1; 9(9): 1039–1049. doi: 10.1242/dmm.023374
PMCID:
PMC5047693
AbstractArticle
20.
Interactomic study on interaction between lipid droplets and mitochondria
Jing Pu, Cheol Woong Ha, Shuyan Zhang, Jong Pil Jung, Won-Ki Huh, Pingsheng Liu
Protein Cell. 2011 Jun; 2(6): 487–496. Published online 2011 Jul 12. doi: 10.1007/s13238-011-1061-y
PMCID:
PMC4875178
AbstractArticlePDF–1.5M

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