PMC Links for GEO Profiles (Select 64948603) - PMC

Select item 85664731.

Competitive binding of E3 ligases TRIM26 and WWP2 controls SOX2 in glioblastoma

Tatenda Mahlokozera, Bhuvic Patel, Hao Chen, Patrick Desouza, Xuan Qu, Diane D. Mao, Daniel Hafez, Wei Yang, Rukayat Taiwo, Mounica Paturu, Afshin Salehi, Amit D. Gujar, Gavin P. Dunn, Nima Mosammaparast, Allegra A. Petti, Hiroko Yano, Albert H. Kim

Nat Commun. 2021; 12: 6321. Published online 2021 Nov 3. doi: 10.1038/s41467-021-26653-6

PMCID:: PMC8566473

Abstract Article PDF–2.7M

Select item 81650302.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 62982543.

A protein-protein interaction map of the TNF-induced NF-κB signal transduction pathway

Emmy Van Quickelberghe, Delphine De Sutter, Geert van Loo, Sven Eyckerman, Kris Gevaert

Sci Data. 2018; 5: 180289. Published online 2018 Dec 18. doi: 10.1038/sdata.2018.289

PMCID:: PMC6298254

Abstract Article PDF–1.4M

Select item 55316114.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 46172115.

The BioPlex Network: A Systematic Exploration of the Human Interactome

Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2016 Jul 16.

Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043

PMCID:: PMC4617211

Abstract Article PDF–2.2M

Select item 45525026.

Transfer of the human NKG2D ligands UL16 binding proteins (ULBP) 1–3 is related to lytic granule release and leads to ligand retransfer and killing of ULBP-recipient natural killer cells

Sheila López-Cobo, Gema Romera-Cárdenas, Eva M García-Cuesta, Hugh T Reyburn, Mar Valés-Gómez

Immunology. 2015 Sep; 146(1): 70–80. Published online 2015 Jun 25. doi: 10.1111/imm.12482

PMCID:: PMC4552502

Abstract Article PDF–356K

Select item 45056617.

Varicella-Zoster Virus and Herpes Simplex Virus 1 Differentially Modulate NKG2D Ligand Expression during Productive Infection

Tessa M. Campbell, Brian P. McSharry, Megan Steain, Barry Slobedman, Allison Abendroth

J Virol. 2015 Aug 1; 89(15): 7932–7943. Published online 2015 May 20. doi: 10.1128/JVI.00292-15

PMCID:: PMC4505661

Abstract Article PDF–1.1M

Select item 43199518.

ABCE1 Is a Highly Conserved RNA Silencing Suppressor

Kairi Kärblane, Jelena Gerassimenko, Lenne Nigul, Alla Piirsoo, Agata Smialowska, Kadri Vinkel, Per Kylsten, Karl Ekwall, Peter Swoboda, Erkki Truve, Cecilia Sarmiento

PLoS One. 2015; 10(2): e0116702. Published online 2015 Feb 6. doi: 10.1371/journal.pone.0116702

PMCID:: PMC4319951

Abstract Article PDF–2.8M

Select item 41983419.

c-Myc regulates expression of NKG2D ligands ULBP1/2/3 in AML and modulates their susceptibility to NK-mediated lysis

Arash Nanbakhsh, Cécile Pochon, Aude Mallavialle, Sophie Amsellem, Jean Henri Bourhis, Salem Chouaib

Blood. 2014 Jun 5; 123(23): 3585–3595. Prepublished online 2014 Mar 27. doi: 10.1182/blood-2013-11-536219

PMCID:: PMC4198341

Abstract Article

Select item 413852110.

The Regulatory Effect of UL-16 Binding Protein-3 Expression on the Cytotoxicity of NK Cells in Cancer Patients

Xiao Mou, Yuepeng Zhou, Peng Jiang, Tong Zhou, Qian Jiang, Chengcheng Xu, Hongli Liu, Tingting Zheng, Guoyue Yuan, Yanyun Zhang, Deyu Chen, Chaoming Mao

Sci Rep. 2014; 4: 6138. Published online 2014 Aug 20. doi: 10.1038/srep06138

PMCID:: PMC4138521

Abstract Article PDF–1.7M

Select item 353092811.

The anti-viral factor APOBEC3G enhances natural killer cell recognition of HIV-infected primary T cells

Jason M. Norman, Michael Mashiba, Lucy A McNamara, Adewunmi Onafuwa-Nuga, Estelle Chiari-Fort, Wenwen Shen, Kathleen L. Collins

Nat Immunol. Author manuscript; available in PMC 2012 Dec 27.

Published in final edited form as: Nat Immunol. 2011 Oct; 12(10): 975–983. Published online 2011 Aug 28. doi: 10.1038/ni.2087

PMCID:: PMC3530928

Abstract Article PDF–1.9M

Select item 317805912.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 303170313.

Single nucleotide polymorphisms of matrix metalloproteinase 9 (MMP9) and tumor protein 73 (TP73) interact with Epstein-Barr virus in chronic lymphocytic leukemia: results from the European case-control study EpiLymph

Delphine Casabonne, Oscar Reina, Yolanda Benavente, Nikolaus Becker, Marc Maynadié, Lenka Foretová, Pierluigi Cocco, Anna González-Neira, Alexandra Nieters, Paolo Boffetta, Jaap M. Middeldorp, Silvia de Sanjose

Haematologica. 2011 Feb; 96(2): 323–327. Published online 2010 Nov 3. doi: 10.3324/haematol.2010.031161

PMCID:: PMC3031703

Abstract Article PDF–401K

Select item 292117214.

Genome-wide association study in alopecia areata implicates both innate and adaptive immunity

Lynn Petukhova, Madeleine Duvic, Maria Hordinsky, David Norris, Vera Price, Yutaka Shimomura, Hyunmi Kim, Pallavi Singh, Annette Lee, Wei V. Chen, Katja C. Meyer, Ralf Paus, Colin A. B. Jahoda, Christopher I. Amos, Peter K. Gregersen, Angela M. Christian

Nature. Author manuscript; available in PMC 2011 Jan 1.

Published in final edited form as: Nature. 2010 Jul 1; 466(7302): 113–117. doi: 10.1038/nature09114

PMCID:: PMC2921172

Abstract Article PDF–1.8M

Select item 274701515.

HIV-1 Vpr Triggers Natural Killer Cell–Mediated Lysis of Infected Cells through Activation of the ATR-Mediated DNA Damage Response

Jeffrey Ward, Zachary Davis, Jason DeHart, Erik Zimmerman, Alberto Bosque, Enrico Brunetta, Domenico Mavilio, Vicente Planelles, Edward Barker

PLoS Pathog. 2009 Oct; 5(10): e1000613. Published online 2009 Oct 2. doi: 10.1371/journal.ppat.1000613

PMCID:: PMC2747015

Abstract Article PDF–695K

Select item 221188216.

Cell Surface Organization of Stress-inducible Proteins ULBP and MICA That Stimulate Human NK Cells and T Cells via NKG2D

Konstantina Eleme, Sabrina B. Taner, Björn Önfelt, Lucy M. Collinson, Fiona E. McCann, N. Jan Chalupny, David Cosman, Colin Hopkins, Anthony I. Magee, Daniel M. Davis

J Exp Med. 2004 Apr 5; 199(7): 1005–1010. doi: 10.1084/jem.20032194

PMCID:: PMC2211882

Abstract Article PDF–241K

Select item 13924117.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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