PMC Links for GEO Profiles (Select 65892533) - PMC

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 87755914.

Systematic Screening of Penetratin’s Protein Targets by Yeast Proteome Microarrays

Pramod Shah, Chien-Sheng Chen

Int J Mol Sci. 2022 Jan; 23(2): 712. Published online 2022 Jan 10. doi: 10.3390/ijms23020712

PMCID:: PMC8775591

Abstract Article PDF–5.0M

Select item 76829885.

The deubiquitylase Ubp15 couples transcription to mRNA export

Fanny Eyboulet, Célia Jeronimo, Jacques Côté, François Robert

eLife. 2020; 9: e61264. Published online 2020 Nov 23. doi: 10.7554/eLife.61264

PMCID:: PMC7682988

Abstract Article PDF–1.4M

Select item 75731256.

Engineering an Alcohol-Forming Fatty Acyl-CoA Reductase for Aldehyde and Hydrocarbon Biosynthesis in Saccharomyces cerevisiae

Jee Loon Foo, Bahareh Haji Rasouliha, Adelia Vicanatalita Susanto, Susanna Su Jan Leong, Matthew Wook Chang

Front Bioeng Biotechnol. 2020; 8: 585935. Published online 2020 Oct 6. doi: 10.3389/fbioe.2020.585935

PMCID:: PMC7573125

Abstract Article PDF–5.6M

Select item 72617187.

Growth-Regulated Hsp70 Phosphorylation Regulates Stress Responses and Prion Maintenance

Chung-Hsuan Kao, Seung W. Ryu, Min J. Kim, Xuemei Wen, Oshadi Wimalarathne, Tanya T. Paull

Mol Cell Biol. 2020 Jun; 40(12): e00628-19. Prepublished online 2020 Mar 23. Published online 2020 May 28. doi: 10.1128/MCB.00628-19

PMCID:: PMC7261718

Abstract Article PDF–3.4M

Select item 68308128.

Co-opting the fermentation pathway for tombusvirus replication: Compartmentalization of cellular metabolic pathways for rapid ATP generation

Wenwu Lin, Yuyan Liu, Melissa Molho, Shengjie Zhang, Longshen Wang, Lianhui Xie, Peter D. Nagy

PLoS Pathog. 2019 Oct; 15(10): e1008092. Published online 2019 Oct 24. doi: 10.1371/journal.ppat.1008092

PMCID:: PMC6830812

Abstract Article PDF–7.0M

Select item 66833569.

Comparative transcriptional analysis of flavour-biosynthetic genes of a native Saccharomyces cerevisiae strain fermenting in its natural must environment, vs. a commercial strain and correlation of the genes’ activities with the produced flavour compounds

Maria Parapouli, Afroditi Sfakianaki, Nikolaos Monokrousos, Angelos Perisynakis, Efstathios Hatziloukas

J Biol Res (Thessalon) 2019 Dec; 26: 5. Published online 2019 Aug 5. doi: 10.1186/s40709-019-0096-8

PMCID:: PMC6683356

Abstract Article PDF–1.0M

Select item 629136610.

The cellular economy of the Saccharomyces cerevisiae zinc proteome

Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide

Metallomics. Author manuscript; available in PMC 2019 Dec 12.

Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j

PMCID:: PMC6291366

Abstract Article PDF–3.0M

Select item 608666211.

Estimating the protein burden limit of yeast cells by measuring the expression limits of glycolytic proteins

Yuichi Eguchi, Koji Makanae, Tomohisa Hasunuma, Yuko Ishibashi, Keiji Kito, Hisao Moriya

eLife. 2018; 7: e34595. Published online 2018 Aug 10. doi: 10.7554/eLife.34595

PMCID:: PMC6086662

Abstract Article PDF–4.7M

Select item 584934012.

Genome-wide association across Saccharomyces cerevisiae strains reveals substantial variation in underlying gene requirements for toxin tolerance

Maria Sardi, Vaishnavi Paithane, Michael Place, De Elegant Robinson, James Hose, Dana J. Wohlbach, Audrey P. Gasch

PLoS Genet. 2018 Feb; 14(2): e1007217. Published online 2018 Feb 23. doi: 10.1371/journal.pgen.1007217

PMCID:: PMC5849340

Abstract Article PDF–3.6M

Select item 576535913.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 566188514.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 560025415.

The Genetic Landscape of a Cell

Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Sep 15.

Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823

PMCID:: PMC5600254

Abstract Article PDF–2.4M

Select item 520434816.

A novel translational control mechanism involving RNA structures within coding sequences

Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez

Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116