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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107911532.

Persistent Acetylation of Histone H3 Lysine 56 Compromises the Activity of DNA Replication Origins

Roch Tremblay, Yosra Mehrjoo, Oumaima Ahmed, Antoine Simoneau, Mary E. McQuaid, El Bachir Affar, Corey Nislow, Guri Giaever, Hugo Wurtele

Mol Cell Biol. 2023; 43(11): 566–595. Published online 2023 Nov 17. doi: 10.1080/10985549.2023.2259739

PMCID:: PMC10791153

Abstract Article PDF–4.0M

Select item 96296213.

Comprehensive characterization of the Hsp70 interactome reveals novel client proteins and interactions mediated by posttranslational modifications

Nitika, Bo Zheng, Linhao Ruan, Jake T. Kline, Siddhi Omkar, Jacek Sikora, Mara Texeira Torres, Yuhao Wang, Jade E. Takakuwa, Romain Huguet, Cinzia Klemm, Verónica A. Segarra, Matthew J. Winters, Peter M. Pryciak, Peter H. Thorpe, Kazuo Tatebayashi, Rong Li, Luca Fornelli, Andrew W. Truman

PLoS Biol. 2022 Oct; 20(10): e3001839. Published online 2022 Oct 21. doi: 10.1371/journal.pbio.3001839

PMCID:: PMC9629621

Abstract Article PDF–3.4M

Select item 92098114.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 91699135.

The ubiquitin–proteasome system regulates meiotic chromosome organization

Xiao Yang, Meihui Song, Ying Wang, Taicong Tan, Zhongyu Tian, Binyuan Zhai, Xuan Yang, Yingjin Tan, Yanding Cao, Shaojun Dai, Shunxin Wang, Liangran Zhang

Proc Natl Acad Sci U S A. 2022 Apr 26; 119(17): e2106902119. Published online 2022 Apr 19. doi: 10.1073/pnas.2106902119

PMCID:: PMC9169913

Abstract Article PDF–2.1M

Select item 85275116.

Genetic screen for suppressors of increased silencing in rpd3 mutants in Saccharomyces cerevisiae identifies a potential role for H3K4 methylation

Richard A Kleinschmidt, Laurie M Lyon, Samantha L Smith, Jonah Rittenberry, K Maeve Lawless, Anabelle A Acosta, David Donze

G3 (Bethesda) 2021 Nov; 11(11): jkab309. Published online 2021 Sep 17. doi: 10.1093/g3journal/jkab309

PMCID:: PMC8527511

Abstract Article PDF–808K

Select item 84212047.

Investigation of RNA metabolism through large-scale genetic interaction profiling in yeast

Laurence Decourty, Christophe Malabat, Emmanuel Frachon, Alain Jacquier, Cosmin Saveanu

Nucleic Acids Res. 2021 Sep 7; 49(15): 8535–8555. Published online 2021 Aug 6. doi: 10.1093/nar/gkab680

PMCID:: PMC8421204

Abstract Article PDF–2.9M

Select item 79965538.

The Amazing Acrobat: Yeast’s Histone H3K56 Juggles Several Important Roles While Maintaining Perfect Balance

Lihi Gershon, Martin Kupiec

Genes (Basel) 2021 Mar; 12(3): 342. Published online 2021 Feb 25. doi: 10.3390/genes12030342

PMCID:: PMC7996553

Abstract Article PDF–1.2M

Select item 79248029.

A novel role for Dun1 in the regulation of origin firing upon hyper-acetylation of H3K56

Lihi Gershon, Martin Kupiec

PLoS Genet. 2021 Feb; 17(2): e1009391. Published online 2021 Feb 18. doi: 10.1371/journal.pgen.1009391

PMCID:: PMC7924802

Abstract Article PDF–2.3M

Select item 771875110.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 771336111.

Deletion of the GAPDH gene contributes to genome stability in Saccharomyces cerevisiae

Miki Hanasaki, Keisuke Yaku, Motohiro Yamauchi, Takashi Nakagawa, Hiroshi Masumoto

Sci Rep. 2020; 10: 21146. Published online 2020 Dec 3. doi: 10.1038/s41598-020-78302-5

PMCID:: PMC7713361

Abstract Article PDF–1.5M

Select item 732543512.

A genetic interaction map centered on cohesin reveals auxiliary factors involved in sister chromatid cohesion in S. cerevisiae

Su Ming Sun, Amandine Batté, Mireille Elmer, Sophie C. van der Horst, Tibor van Welsem, Gordon Bean, Trey Ideker, Fred van Leeuwen, Haico van Attikum

J Cell Sci. 2020 May 15; 133(10): jcs237628. Published online 2020 May 22. doi: 10.1242/jcs.237628

PMCID:: PMC7325435

Abstract Article

Select item 697018813.

Histone H3 Lysine 56 Acetylation Is Required for Formation of Normal Levels of Meiotic DNA Breaks in S. cerevisiae

Zsolt Karányi, Lilla Hornyák, Lóránt Székvölgyi

Front Cell Dev Biol. 2019; 7: 364. Published online 2020 Jan 10. doi: 10.3389/fcell.2019.00364

PMCID:: PMC6970188

Abstract Article PDF–3.5M

Select item 685852414.

Rpd3L and Hda1 histone deacetylases facilitate repair of broken forks by promoting sister chromatid cohesion

Pedro Ortega, Belén Gómez-González, Andrés Aguilera

Nat Commun. 2019; 10: 5178. Published online 2019 Nov 15. doi: 10.1038/s41467-019-13210-5

PMCID:: PMC6858524

Abstract Article PDF–2.1M

Select item 681139815.

Decyl Gallate as a Possible Inhibitor of N-Glycosylation Process in Paracoccidioides lutzii

Ana Carolina Alves de Paula e Silva, Haroldo Cesar de Oliveira, Liliana Scorzoni, Caroline Maria Marcos, Claudia Tavares dos Santos, Ana Marisa Fusco-Almeida, Ana Carolina Guerta Salina, Alexandra Ivo Medeiros, Fausto Almeida, Sheena Claire Li, Charles Boone, Maria J. S. Mendes-Giannini

Antimicrob Agents Chemother. 2019 Nov; 63(11): e01909-18. Prepublished online 2019 Aug 26. Published online 2019 Oct 22. doi: 10.1128/AAC.01909-18

PMCID:: PMC6811398

Abstract Article PDF–1.0M

Select item 671170616.

A nuclear role for the DEAD-box protein Dbp5 in tRNA export

Azra Lari, Arvind Arul Nambi Rajan, Rima Sandhu, Taylor Reiter, Rachel Montpetit, Barry P Young, Chris JR Loewen, Ben Montpetit

eLife. 2019; 8: e48410. Published online 2019 Aug 27. doi: 10.7554/eLife.48410

Correction in:: eLife. 2020; 9: e63264.

PMCID:: PMC6711706

Abstract Article PDF–3.8M

Select item 670747217.

Chromatin Modifiers Alter Recombination Between Divergent DNA Sequences

Ujani Chakraborty, Beata Mackenroth, David Shalloway, Eric Alani

Genetics. 2019 Aug; 212(4): 1147–1162. Published online 2019 Jun 20. doi: 10.1534/genetics.119.302395

PMCID:: PMC6707472

Abstract Article PDF–1.2M

Select item 664063018.

Yeast Sirtuin Family Members Maintain Transcription Homeostasis to Ensure Genome Stability

Jessica L. Feldman, Craig L. Peterson

Cell Rep. Author manuscript; available in PMC 2019 Jul 19.

Published in final edited form as: Cell Rep. 2019 Jun 4; 27(10): 2978–2989.e5. doi: 10.1016/j.celrep.2019.05.009

PMCID:: PMC6640630

Abstract Article PDF–2.4M

Select item 629136619.

The cellular economy of the Saccharomyces cerevisiae zinc proteome

Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide

Metallomics. Author manuscript; available in PMC 2019 Dec 12.

Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j

PMCID:: PMC6291366

Abstract Article PDF–3.0M

Select item 621571320.

Systematic Analysis of Complex Genetic Interactions

Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers

Science. Author manuscript; available in PMC 2018 Nov 4.

Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729

PMCID:: PMC6215713

Abstract Article PDF–1.9M

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