PMC Links for GEO Profiles (Select 6678388) - PMC

Select item 109176601.

Genetic determinants of micronucleus formation in vivo

D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus

Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0

PMCID:: PMC10917660

Abstract Article PDF–4.8M

Select item 96694862.

Tissue-specific requirement of sodium channel and clathrin linker 1 (Sclt1) for ciliogenesis during limb development

Hankyu Lee, Kyeong-Hye Moon, Jieun Song, Suyeon Je, Jinwoong Bok, Hyuk Wan Ko

Front Cell Dev Biol. 2022; 10: 1058895. Published online 2022 Nov 3. doi: 10.3389/fcell.2022.1058895

PMCID:: PMC9669486

Abstract Article PDF–2.8M

Select item 79387703.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 65070964.

Cenpj Regulates Cilia Disassembly and Neurogenesis in the Developing Mouse Cortex

Wenyu Ding, Qian Wu, Le Sun, Na Clara Pan, Xiaoqun Wang

J Neurosci. 2019 Mar 13; 39(11): 1994–2010. doi: 10.1523/JNEUROSCI.1849-18.2018

PMCID:: PMC6507096

Abstract Article PDF–24M

Select item 39260465.

C2cd3 is critical for centriolar distal appendage assembly and ciliary vesicle docking in mammals

Xuan Ye, Huiqing Zeng, Gang Ning, Jeremy F. Reiter, Aimin Liu

Proc Natl Acad Sci U S A. 2014 Feb 11; 111(6): 2164–2169. Published online 2014 Jan 27. doi: 10.1073/pnas.1318737111

PMCID:: PMC3926046

Abstract Article PDF–1.2M

Select item 33763946.

The deubiquitinase USP9X suppresses pancreatic ductal adenocarcinoma

Pedro A. Pérez-Mancera, Alistair G. Rust, Louise van der Weyden, Glen Kristiansen, Allen Li, Aaron L. Sarver, Kevin A. T. Silverstein, Robert Grützmann, Daniela Aust, Petra Rümmele, Thomas Knösel, Colin Herd, Derek L. Stemple, Ross Kettleborough, Jacqueline A. Brosnan, Ang Li, Richard Morgan, Spencer Knight, Jun Yu, Shane Stegeman, Lara S. Collier, Jelle J. ten Hoeve, Jeroen de Ridder, Alison P. Klein, Michael Goggins, Ralph H. Hruban, David K. Chang, Andrew V. Biankin, Sean M. Grimmond, APGI, Lodewyk F. A. Wessels, Stephen A. Wood, Christine A. Iacobuzio-Donahue, Christian Pilarsky, David A. Largaespada, David J. Adams, David A. Tuveson

Nature. Author manuscript; available in PMC 2012 Dec 14.

Published in final edited form as: Nature. 2012 Jun 14; 486(7402): 266–270. Published online 2012 Apr 29. doi: 10.1038/nature11114

Correction in:: volume 494 on page 390

PMCID:: PMC3376394

Abstract Article PDF–1.1M

Select item 31780597.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 31773188.

Transposon mutagenesis with coat color genotyping identifies an essential role for Skor2 in sonic hedgehog signaling and cerebellum development

Baiping Wang, Wilbur Harrison, Paul A. Overbeek, Hui Zheng

Development. 2011 Oct 15; 138(20): 4487–4497. doi: 10.1242/dev.067264

PMCID:: PMC3177318

Abstract Article

Select item 27711239.

Whole-body Sleeping Beauty mutagenesis can cause penetrant leukemia/lymphoma and rare high-grade glioma without associated embryonic lethality

Lara S. Collier, David J. Adams, Christopher S. Hackett, Laura E. Bendzick, Keiko Akagi, Michael N. Davies, Miechaleen D. Diers, Fausto J. Rodriguez, Aaron M. Bender, Christina Tieu, Ilze Matise, Adam J. Dupuy, Neal G. Copeland, Nancy A. Jenkins, J. Graeme Hodgson, William A. Weiss, Robert B. Jenkins, David A. Largaespada

Cancer Res. Author manuscript; available in PMC 2010 May 1.

Published in final edited form as: Cancer Res. 2009 Nov 1; 69(21): 8429–8437. Published online 2009 Oct 20. doi: 10.1158/0008-5472.CAN-09-1760

PMCID:: PMC2771123

Abstract Article PDF–2.7M

Select item 271096210.

Identification of PDE4D as a proliferation promoting factor in prostate cancer using a Sleeping Beauty transposon based somatic mutagenesis screen

Eric P. Rahrmann, Lara S. Collier, Todd P. Knutson, Meghan E. Doyal, Sheri L. Kuslak, Laura E. Green, Rita L. Malinowski, Laura Roethe, Keiko Akagi, Michelle Waknitz, Wei Huang, David A. Largaespada, Paul C. Marker

Cancer Res. Author manuscript; available in PMC 2010 May 15.

Published in final edited form as: Cancer Res. 2009 May 15; 69(10): 4388–4397. Published online 2009 Apr 28. doi: 10.1158/0008-5472.CAN-08-3901

PMCID:: PMC2710962

Abstract Article PDF–3.2M

Select item 158426311.

Gene Mutations and Genomic Rearrangements in the Mouse as a Result of Transposon Mobilization from Chromosomal Concatemers

Aron M Geurts, Lara S Collier, Jennifer L Geurts, Leann L Oseth, Matthew L Bell, David Mu, Robert Lucito, Susan A Godbout, Laura E Green, Scott W Lowe, Betsy A Hirsch, Leslie A Leinwand, David A Largaespada

PLoS Genet. 2006 Sep; 2(9): e156. Prepublished online 2006 Aug 3. Published online 2006 Sep 29. doi: 10.1371/journal.pgen.0020156

PMCID:: PMC1584263

Abstract Article PDF–597K

Select item 155784512.

Conditional gene expression in the mouse using a Sleeping Beauty gene-trap transposon

Aron M Geurts, Andrew Wilber, Corey M Carlson, Paul D Lobitz, Karl J Clark, Perry B Hackett, R Scott McIvor, David A Largaespada

BMC Biotechnol. 2006; 6: 30. Published online 2006 Jun 26. doi: 10.1186/1472-6750-6-30

PMCID:: PMC1557845

Abstract Article PDF–1012K

Select item 146275313.

Transposon mutagenesis of the mouse germline.

Corey M Carlson, Adam J Dupuy, Sabine Fritz, Kevin J Roberg-Perez, Colin F Fletcher, David A Largaespada

Genetics. 2003 Sep; 165(1): 243–256. doi: 10.1093/genetics/165.1.243

PMCID:: PMC1462753

Summary PDF–611K

Select item 31099214.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098015.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 28355416.

Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention

Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands

Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100

Correction in:: Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.

PMCID:: PMC283554

Abstract Article PDF–481K

Select item 13924117.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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