PMC Links for GEO Profiles (Select 6686392) - PMC

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 78473434.

Overexpression of Limb Bud and Heart Alleviates Sepsis-Induced Acute Lung Injury via Inhibiting the NLRP3 Inflammasome

Yifan Wang, Yang Shi, Xiaohong Zhang, Jing Fu, Feng Chen

Biomed Res Int. 2021; 2021: 4084371. Published online 2021 Jan 23. doi: 10.1155/2021/4084371

PMCID:: PMC7847343

Abstract Article PDF–1.2M

Select item 63813885.

Transcription and Signaling Regulators in Developing Neuronal Subtypes of Mouse and Human Enteric Nervous System

Fatima Memic, Viktoria Knoflach, Khomgrit Morarach, Rebecca Sadler, Catia Laranjeira, Jens Hjerling-Leffler, Erik Sundström, Vassilis Pachnis, Ulrika Marklund

Gastroenterology. 2018 Feb; 154(3): 624–636. doi: 10.1053/j.gastro.2017.10.005

PMCID:: PMC6381388

Abstract Article

Select item 63689576.

Loss of Limb-Bud-and-Heart (LBH) Attenuates Mammary Hyperplasia and Tumor Development in MMTV-Wnt1 Transgenic Mice

Kilan Ashad-Bishop, Koteshwararao Garikapati, Linsey E. Lindley, Merce Jorda, Karoline J. Briegel

Biochem Biophys Res Commun. Author manuscript; available in PMC 2020 Jan 8.

Published in final edited form as: Biochem Biophys Res Commun. 2019 Jan 8; 508(2): 536–542. Published online 2018 Dec 1. doi: 10.1016/j.bbrc.2018.11.155

PMCID:: PMC6368957

Abstract Article PDF–2.1M

Select item 60610457.

Integrated analysis of human genetic association study and mouse transcriptome suggests LBH and SHF genes as novel susceptible genes for amyloid-β accumulation in Alzheimer’s disease

Yumi Yamaguchi-Kabata, Takashi Morihara, Tomoyuki Ohara, Toshiharu Ninomiya, Atsushi Takahashi, Hiroyasu Akatsu, Yoshio Hashizume, Noriyuki Hayashi, Daichi Shigemizu, Keith A. Boroevich, Manabu Ikeda, Michiaki Kubo, Masatoshi Takeda, Tatsuhiko Tsunoda

Hum Genet. 2018; 137(6): 521–533. Published online 2018 Jul 13. doi: 10.1007/s00439-018-1906-z

PMCID:: PMC6061045

Abstract Article PDF–949K

Select item 56054448.

Regulation of the Cell Cycle and Inflammatory Arthritis by the Transcription Cofactor LBH Gene

Shinji Matsuda, Deepa Hammaker, Katharyn Topolewski, Karoline Briegel, David L. Boyle, Steven Dowdy, Wei Wang, Gary S. Firestein

J Immunol. Author manuscript; available in PMC 2018 Oct 1.

Published in final edited form as: J Immunol. 2017 Oct 1; 199(7): 2316–2322. Published online 2017 Aug 14. doi: 10.4049/jimmunol.1700719

PMCID:: PMC5605444

Abstract Article PDF–1.5M

Select item 43529749.

The WNT-controlled transcriptional regulator LBH is required for mammary stem cell expansion and maintenance of the basal lineage

Linsey E. Lindley, Kevin M. Curtis, Avencia Sanchez-Mejias, Megan E. Rieger, David J. Robbins, Karoline J. Briegel

Development. 2015 Mar 1; 142(5): 893–904. doi: 10.1242/dev.110403

PMCID:: PMC4352974

Abstract Article

Select item 431955910.

A high resolution spatiotemporal atlas of gene expression of the developing mouse brain

Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones

Neuron. Author manuscript; available in PMC 2015 Jul 16.

Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033

PMCID:: PMC4319559

Abstract Article PDF–3.0M

Select item 357241011.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 317805912.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 305976713.

Subtypes of medulloblastoma have distinct developmental origins

Paul Gibson, Yiai Tong, Giles Robinson, Margaret C. Thompson, D. Spencer Currle, Christopher Eden, Tanya A. Kranenburg, Twala Hogg, Helen Poppleton, Julie Martin, David Finkelstein, Stanley Pounds, Aaron Weiss, Zoltan Patay, Matthew Scoggins, Robert Ogg, Yanxin Pei, Zeng-Jie Yang, Sonja Brun, Youngsoo Lee, Frederique Zindy, Janet C. Lindsey, Makoto M. Taketo, Frederick A. Boop, Robert A. Sanford, Amar Gajjar, Steven C. Clifford, Martine F. Roussel, Peter J. McKinnon, David H. Gutmann, David W. Ellison, Robert Wechsler-Reya, Richard J. Gilbertson

Nature. Author manuscript; available in PMC 2011 Jun 23.

Published in final edited form as: Nature. 2010 Dec 23; 468(7327): 1095–1099. Published online 2010 Dec 8. doi: 10.1038/nature09587

PMCID:: PMC3059767

Abstract Article PDF–1.9M

Select item 305810114.

An expression profile analysis of ES cell-derived definitive endodermal cells and Pdx1-expressing cells

Soichiro Ogaki, Seiko Harada, Nobuaki Shiraki, Kazuhiko Kume, Shoen Kume

BMC Dev Biol. 2011; 11: 13. Published online 2011 Mar 1. doi: 10.1186/1471-213X-11-13

PMCID:: PMC3058101

Abstract Article PDF–5.6M

Select item 293754715.

The Embryonic Transcription Cofactor LBH Is a Direct Target of the Wnt Signaling Pathway in Epithelial Development and in Aggressive Basal Subtype Breast Cancers

Megan E. Rieger, Andrew H. Sims, Ebony R. Coats, Robert B. Clarke, Karoline J. Briegel

Mol Cell Biol. 2010 Sep; 30(17): 4267–4279. Published online 2010 Jul 6. doi: 10.1128/MCB.01418-09

PMCID:: PMC2937547

Abstract Article PDF–2.6M

Select item 276073416.

The transcriptional cofactor Lbh regulates angiogenesis and endochondral bone formation during fetal bone development

K.L. Conen, S. Nishimori, S. Provot, H.M. Kronenberg

Dev Biol. Author manuscript; available in PMC 2010 Sep 15.

Published in final edited form as: Dev Biol. 2009 Sep 15; 333(2): 348–358. Published online 2009 Jul 14. doi: 10.1016/j.ydbio.2009.07.003

PMCID:: PMC2760734

Abstract Article PDF–4.8M

Select item 185523517.

Tbx3 controls the sinoatrial node gene program and imposes pacemaker function on the atria

Willem M.H. Hoogaars, Angela Engel, Janynke F. Brons, Arie O. Verkerk, Frederik J. de Lange, L.Y. Elaine Wong, Martijn L. Bakker, Danielle E. Clout, Vincent Wakker, Phil Barnett, Jan Hindrik Ravesloot, Antoon F.M. Moorman, E. Etienne Verheijck, Vincent M. Christoffels

Genes Dev. 2007 May 1; 21(9): 1098–1112. doi: 10.1101/gad.416007

PMCID:: PMC1855235

Abstract Article PDF–1.6M

Select item 141356818.

BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System

Susan Magdaleno, Patricia Jensen, Craig L Brumwell, Anna Seal, Karen Lehman, Andrew Asbury, Tony Cheung, Tommie Cornelius, Diana M Batten, Christopher Eden, Shannon M Norland, Dennis S Rice, Nilesh Dosooye, Sundeep Shakya, Perdeep Mehta, Tom Curran

PLoS Biol. 2006 Apr; 4(4): e86. Published online 2006 Mar 28. doi: 10.1371/journal.pbio.0040086

PMCID:: PMC1413568

Article PDF–99K

Select item 31099219.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098020.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

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