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Select item 88813681.

Protective Role of Spermidine in Colitis and Colon Carcinogenesis

Alain P. Gobert, Yvonne L. Latour, Mohammad Asim, Daniel P. Barry, Margaret M. Allaman, Jordan L. Finley, Thaddeus M. Smith, Kara M. McNamara, Kshipra Singh, Johanna C Sierra, Alberto G. Delgado, Paula B. Luis, Claus Schneider, M. Kay Washington, M. Blanca Piazuelo, Shilin Zhao, Lori A. Coburn, Keith T. Wilson

Gastroenterology. Author manuscript; available in PMC 2023 Mar 1.

Published in final edited form as: Gastroenterology. 2022 Mar; 162(3): 813–827.e8. Published online 2021 Nov 10. doi: 10.1053/j.gastro.2021.11.005

Correction in:: Gastroenterology. 2022 Apr 21

PMCID:: PMC8881368

Abstract Article PDF–3.4M

Select item 83132392.

Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development

Francesco Bedogni, Robert F. Hevner

Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034

PMCID:: PMC8313239

Abstract Article PDF–1.6M

Select item 76637553.

Emerging Role for Linear and Circular Spermine Oxidase RNAs in Skeletal Muscle Physiopathology

Jonathan Fernando Reinoso-Sánchez, Giulia Baroli, Guglielmo Duranti, Silvia Scaricamazza, Stefania Sabatini, Cristiana Valle, Mariangela Morlando, Robert Anthony Casero, Jr., Irene Bozzoni, Paolo Mariottini, Roberta Ceci, Manuela Cervelli

Int J Mol Sci. 2020 Nov; 21(21): 8227. Published online 2020 Nov 3. doi: 10.3390/ijms21218227

PMCID:: PMC7663755

Abstract Article PDF–20M

Select item 75596414.

Ablation of polyamine catabolic enzymes provokes Purkinje cell damage, neuroinflammation, and severe ataxia

Kamyar Zahedi, Marybeth Brooks, Sharon Barone, Negah Rahmati, Tracy Murray Stewart, Matthew Dunworth, Christina Destefano-Shields, Nupur Dasgupta, Steve Davidson, Diana M. Lindquist, Christine E. Fuller, Roger D. Smith, John L. Cleveland, Robert A. Casero, Jr, Manoocher Soleimani

J Neuroinflammation. 2020; 17: 301. Published online 2020 Oct 14. doi: 10.1186/s12974-020-01955-6

PMCID:: PMC7559641

Abstract Article PDF–12M

Select item 74159915.

BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)

Kou Motani, Hidetaka Kosako

J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323

PMCID:: PMC7415991

Abstract Article PDF–2.0M

Select item 72601026.

Spermine Oxidase Mediates Helicobacter pylori-induced Gastric Inflammation, DNA Damage, and Carcinogenic Signaling

Johanna C. Sierra, M. Blanca Piazuelo, Paula B. Luis, Daniel P. Barry, Margaret M. Allaman, Mohammad Asim, Thomas A. Sebrell, Jordan L. Finley, Kristie L. Rose, Salisha Hill, Steven L. Holshouser, Robert A. Casero, Jr., John L. Cleveland, Patrick M. Woster, Kevin L. Schey, Diane Bimczok, Claus Schneider, Alain P. Gobert, Keith T. Wilson

Oncogene. Author manuscript; available in PMC 2020 Oct 29.

Published in final edited form as: Oncogene. 2020 May; 39(22): 4465–4474. Published online 2020 Apr 29. doi: 10.1038/s41388-020-1304-6

PMCID:: PMC7260102

Abstract Article PDF–2.4M

Select item 59960347.

Distinct Immunomodulatory Effects of Spermine Oxidase in Colitis Induced by Epithelial Injury or Infection

Alain P. Gobert, Nicole T. Al-Greene, Kshipra Singh, Lori A. Coburn, Johanna C. Sierra, Thomas G. Verriere, Paula B. Luis, Claus Schneider, Mohammad Asim, Margaret M. Allaman, Daniel P. Barry, John L. Cleveland, Christina E. Destefano Shields, Robert A. Casero, Jr., M. Kay Washington, M. Blanca Piazuelo, Keith T. Wilson

Front Immunol. 2018; 9: 1242. Published online 2018 Jun 5. doi: 10.3389/fimmu.2018.01242

PMCID:: PMC5996034

Abstract Article PDF–8.7M

Select item 55909798.

Activation of endoplasmic reticulum stress response by enhanced polyamine catabolism is important in the mediation of cisplatin-induced acute kidney injury

Kamyar Zahedi, Sharon Barone, Christina Destefano-Shields, Marybeth Brooks, Tracy Murray-Stewart, Matthew Dunworth, Weimin Li, Joanne R. Doherty, Mark A. Hall, Roger D. Smith, John L. Cleveland, Robert A. Casero, Jr., Manoocher Soleimani

PLoS One. 2017; 12(9): e0184570. Published online 2017 Sep 8. doi: 10.1371/journal.pone.0184570

PMCID:: PMC5590979

Abstract Article PDF–11M

Select item 42977819.

Spermine oxidase maintains basal skeletal muscle gene expression and fiber size and is strongly repressed by conditions that cause skeletal muscle atrophy

Kale S. Bongers, Daniel K. Fox, Steven D. Kunkel, Larissa V. Stebounova, Daryl J. Murry, Miles A. Pufall, Scott M. Ebert, Michael C. Dyle, Steven A. Bullard, Jason M. Dierdorff, Christopher M. Adams

Am J Physiol Endocrinol Metab. 2015 Jan 15; 308(2): E144–E158. Published online 2014 Nov 18. doi: 10.1152/ajpendo.00472.2014

PMCID:: PMC4297781

Abstract Article

Select item 368679710.

A New Transgenic Mouse Model for Studying the Neurotoxicity of Spermine Oxidase Dosage in the Response to Excitotoxic Injury

Manuela Cervelli, Gabriella Bellavia, Marcello D'Amelio, Virve Cavallucci, Sandra Moreno, Joachim Berger, Roberta Nardacci, Manuela Marcoli, Guido Maura, Mauro Piacentini, Roberto Amendola, Francesco Cecconi, Paolo Mariottini

PLoS One. 2013; 8(6): e64810. Published online 2013 Jun 19. doi: 10.1371/journal.pone.0064810

PMCID:: PMC3686797

Abstract Article PDF–4.2M

Select item 357241011.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 320265412.

Spermine Oxidase Mediates the Gastric Cancer Risk Associated With Helicobacter pylori CagA

Rupesh Chaturvedi, Mohammad Asim, Judith Romero-Gallo, Daniel P. Barry, Svea Hoge, Thibaut de Sablet, Alberto G. Delgado, Lydia E. Wroblewski, M. Blanca Piazuelo, Fang Yan, Dawn A. Israel, Robert A. Casero, Jr., Pelayo Correa, Alain P. Gobert, D. Brent Polk, Richard M. Peek, Jr., Keith T. Wilson

Gastroenterology. Author manuscript; available in PMC 2012 Nov 1.

Published in final edited form as: Gastroenterology. 2011 Nov; 141(5): 1696–1708.e2. Published online 2011 Aug 10. doi: 10.1053/j.gastro.2011.07.045

PMCID:: PMC3202654

Abstract Article PDF–4.5M

Select item 317805913.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 255627014.

Large-scale gene trapping in C57BL/6N mouse embryonic stem cells

Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin

Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108

PMCID:: PMC2556270

Abstract Article PDF–493K

Select item 122292915.

Identification and characterization of a novel flavin-containing spermine oxidase of mammalian cell origin.

Slavoljub Vujcic, Paula Diegelman, Cyrus J Bacchi, Debora L Kramer, Carl W Porter

Biochem J. 2002 Nov 1; 367(Pt 3): 665–675. doi: 10.1042/BJ20020720

PMCID:: PMC1222929

Summary PDF–250K

Select item 52892816.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 31099217.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098018.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 28355419.

Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention

Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands

Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100

Correction in:: Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.

PMCID:: PMC283554

Abstract Article PDF–481K

Select item 13924120.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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