PMC Links for GEO Profiles (Select 70254442) - PMC

Frank W. Pun, Bonnie Hei Man Liu, Xi Long, Hoi Wing Leung, Geoffrey Ho Duen Leung, Quinlan T. Mewborne, Junli Gao, Anastasia Shneyderman, Ivan V. Ozerov, Ju Wang, Feng Ren, Alexander Aliper, Evelyne Bischof, Evgeny Izumchenko, Xiaoming Guan, Ke Zhang, Bai Lu, Jeffrey D. Rothstein, Merit E. Cudkowicz, Alex Zhavoronkov

Front Aging Neurosci. 2022; 14: 914017. Published online 2022 Jun 28. doi: 10.3389/fnagi.2022.914017

PMCID:: PMC9273868

Abstract Article PDF–3.6M

Select item 86644864.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 69615785.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 63196086.

Time-resolved mapping of genetic interactions to model rewiring of signaling pathways

Florian Heigwer, Christian Scheeder, Thilo Miersch, Barbara Schmitt, Claudia Blass, Mischan Vali Pour Jamnani, Michael Boutros

eLife. 2018; 7: e40174. Published online 2018 Dec 28. doi: 10.7554/eLife.40174

PMCID:: PMC6319608

Abstract Article PDF–3.4M

Select item 57078057.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890028.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 56787049.

A screen for E3 ubiquitination ligases that genetically interact with the adaptor protein Cindr during Drosophila eye patterning

Kwami F. Ketosugbo, Henry L. Bushnell, Ruth I. Johnson

PLoS One. 2017; 12(11): e0187571. Published online 2017 Nov 8. doi: 10.1371/journal.pone.0187571

PMCID:: PMC5678704

Abstract Article PDF–29M

Select item 478080910.

The Adaptive Significance of Natural Genetic Variation in the DNA Damage Response of Drosophila melanogaster

Nicolas Svetec, Julie M. Cridland, Li Zhao, David J. Begun

PLoS Genet. 2016 Mar; 12(3): e1005869. Published online 2016 Mar 7. doi: 10.1371/journal.pgen.1005869

PMCID:: PMC4780809

Abstract Article PDF–543K

Select item 452833011.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832912.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288713.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 431113314.

The NuRD nucleosome remodelling complex and NHK-1 kinase are required for chromosome condensation in oocytes

Elvira Nikalayevich, Hiroyuki Ohkura

J Cell Sci. 2015 Feb 1; 128(3): 566–575. doi: 10.1242/jcs.158477

PMCID:: PMC4311133

Abstract Article

Select item 379687315.

Roles of chromatin insulator proteins in higher-order chromatin organization and transcription regulation

Jutta Vogelmann, Alessandro Valeri, Emmanuelle Guillou, Olivier Cuvier, Marcelo Nollmann

Nucleus. Author manuscript; available in PMC 2013 Oct 15.

Published in final edited form as: Nucleus. 2011 Sep-Oct; 2(5): 358–369. Published online 2011 Sep 1. doi: 10.4161/nucl.2.5.17860

PMCID:: PMC3796873

Abstract Article PDF–175K

Select item 354700616.

Identification and Characterization of Proteins Involved in Nuclear Organization Using Drosophila GFP Protein Trap Lines

Margaret Rohrbaugh, Alyssia Clore, Julia Davis, Sharonta Johnson, Brian Jones, Keith Jones, Joanne Kim, Bramwel Kithuka, Krystal Lunsford, Joy Mitchell, Brian Mott, Edward Ramos, Maza R. Tchedou, Gilbert Acosta, Mark Araujo, Stuart Cushing, Gabriel Duffy, Felicia Graves, Kyler Griffin, B. V. Gurudatta, Deaundra Jackson, Denis Jaimes, Kendall Jamison, Khali Jones, Dhaujee Kelley, Marquita Kilgore, Derica Laramore, Thuy Le, Bakhtawar Mazhar, Muhammad M. Mazhar, Britney McCrary, Teanndras Miller, Celethia Moreland, Alex Mullins, Elyas Munye, Sheila Okoorie, Elisha Pittman, Nikkita Roberts, De’Warren Rose, Alex Rowland, Anwar Shagarabi, Jamela Smith, Tayler Stallworth, Nicole Stroud, Elizabeth Sung, Kai Sung, Naomi Takenaka, Eduardo Torre, Jarvis Veira, Kim Vu, William Wagstaff, Ashley M. Wood, Karen Wu, Jingping Yang, Victor G. Corces

PLoS One. 2013; 8(1): e53091. Published online 2013 Jan 16. doi: 10.1371/journal.pone.0053091