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Items: 1 to 20 of 80

1.
Large-language models facilitate discovery of the molecular signatures regulating sleep and activity
Di Peng, Liubin Zheng, Dan Liu, Cheng Han, Xin Wang, Yan Yang, Li Song, Miaoying Zhao, Yanfeng Wei, Jiayi Li, Xiaoxue Ye, Yuxiang Wei, Zihao Feng, Xinhe Huang, Miaomiao Chen, Yujie Gou, Yu Xue, Luoying Zhang
Nat Commun. 2024; 15: 3685. Published online 2024 May 1. doi: 10.1038/s41467-024-48005-w
PMCID:
PMC11063160
AbstractArticlePDF–2.7M
2.
Condensin-mediated restriction of retrotransposable elements facilitates brain development in Drosophila melanogaster
Bert I. Crawford, Mary Jo Talley, Joshua Russman, James Riddle, Sabrina Torres, Troy Williams, Michelle S. Longworth
Nat Commun. 2024; 15: 2716. Published online 2024 Mar 28. doi: 10.1038/s41467-024-47042-9
PMCID:
PMC10978865
AbstractArticlePDF–3.6M
3.
A dual‐function SNF2 protein drives chromatid resolution and nascent transcripts removal in mitosis
Catarina Carmo, João Coelho, Rui D Silva, Alexandra Tavares, Ana Boavida, Paola Gaetani, Leonardo G Guilgur, Rui Gonçalo Martinho, Raquel A Oliveira
EMBO Rep. 2023 Sep; 24(9): e56463. Published online 2023 Jul 18. doi: 10.15252/embr.202256463
PMCID:
PMC10481674
AbstractArticlePDF–3.5M
4.
Transcriptome analysis of FOXO-dependent hypoxia gene expression identifies Hipk as a regulator of low oxygen tolerance in Drosophila
Kate Ding, Elizabeth C Barretto, Michael Johnston, Byoungchun Lee, Marco Gallo, Savraj S Grewal
G3 (Bethesda) 2022 Dec; 12(12): jkac263. Published online 2022 Oct 6. doi: 10.1093/g3journal/jkac263
PMCID:
PMC9713431
AbstractArticlePDF–1.0M
5.
When Down Is Up: Heterochromatin, Nuclear Organization and X Upregulation
Reem Makki, Victoria H. Meller
Cells. 2021 Dec; 10(12): 3416. Published online 2021 Dec 4. doi: 10.3390/cells10123416
PMCID:
PMC8700316
AbstractArticlePDF–988K
6.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
7.
A genetic screen for regulators of muscle morphogenesis in Drosophila
Tiffany Ou, Gary Huang, Beth Wilson, Paul Gontarz, James B Skeath, Aaron N Johnson
G3 (Bethesda) 2021 Aug; 11(8): jkab172. Published online 2021 May 16. doi: 10.1093/g3journal/jkab172
PMCID:
PMC8496313
AbstractArticlePDF–1.9M
8.
Condensin I is required for faithful meiosis in Drosophila males
Kristina Kleinschnitz, Nina Vießmann, Mareike Jordan, Stefan K. Heidmann
Chromosoma. 2020; 129(2): 141–160. Published online 2020 Apr 8. doi: 10.1007/s00412-020-00733-w
PMCID:
PMC7260282
AbstractArticlePDF–2.5M
9.
Condensin I subunit Cap-G is essential for proper gene expression during the maturation of post-mitotic neurons
Amira Hassan, Pablo Araguas Rodriguez, Stefan K Heidmann, Emma L Walmsley, Gabriel N Aughey, Tony D Southall
eLife. 2020; 9: e55159. Published online 2020 Apr 7. doi: 10.7554/eLife.55159
PMCID:
PMC7170655
AbstractArticlePDF–4.4M
10.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
11.
Recurrent Losses and Rapid Evolution of the Condensin II Complex in Insects
Thomas D King, Christopher J Leonard, Jacob C Cooper, Son Nguyen, Eric F Joyce, Nitin Phadnis
Mol Biol Evol. 2019 Oct; 36(10): 2195–2204. Published online 2019 Jul 4. doi: 10.1093/molbev/msz140
PMCID:
PMC6759200
AbstractArticlePDF–566K
12.
Unbiased Boolean analysis of public gene expression data for cell cycle gene identification
Sarah A. Dabydeen, Arshad Desai, Debashis Sahoo
Mol Biol Cell. 2019 Jul 1; 30(14): 1770–1779. doi: 10.1091/mbc.E19-01-0013
PMCID:
PMC6727750
AbstractArticlePDF–5.4M
13.
Chromatin That Guides Dosage Compensation Is Modulated by the siRNA Pathway in Drosophila melanogaster
Nikita Deshpande, Victoria H. Meller
Genetics. 2018 Aug; 209(4): 1085–1097. Published online 2018 Jun 19. doi: 10.1534/genetics.118.301173
PMCID:
PMC6063223
AbstractArticlePDF–1.2M
14.
Condensin II drives large-scale folding and spatial partitioning of interphase chromosomes in Drosophila nuclei
Leah F. Rosin, Son C. Nguyen, Eric F. Joyce
PLoS Genet. 2018 Jul; 14(7): e1007393. Published online 2018 Jul 12. doi: 10.1371/journal.pgen.1007393
PMCID:
PMC6042687
AbstractArticlePDF–5.8M
15.
TAD-free analysis of architectural proteins and insulators
Raphaël Mourad, Olivier Cuvier
Nucleic Acids Res. 2018 Mar 16; 46(5): e27. Published online 2017 Dec 19. doi: 10.1093/nar/gkx1246
PMCID:
PMC5861416
AbstractArticlePDF–3.5M
16.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
17.
New genes often acquire male-specific functions but rarely become essential in Drosophila
Shu Kondo, Jeffrey Vedanayagam, Jaaved Mohammed, Sogol Eizadshenass, Lijuan Kan, Nan Pang, Rajaguru Aradhya, Adam Siepel, Josefa Steinhauer, Eric C. Lai
Genes Dev. 2017 Sep 15; 31(18): 1841–1846. doi: 10.1101/gad.303131.117
PMCID:
PMC5695085
AbstractArticlePDF–3.0M
18.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
19.
Uncovering direct and indirect molecular determinants of chromatin loops using a computational integrative approach
Raphaël Mourad, Lang Li, Olivier Cuvier
PLoS Comput Biol. 2017 May; 13(5): e1005538. Published online 2017 May 23. doi: 10.1371/journal.pcbi.1005538
PMCID:
PMC5462476
AbstractArticlePDF–3.1M
20.
Metaphase chromosome structure is dynamically maintained by condensin I-directed DNA (de)catenation
Ewa Piskadlo, Alexandra Tavares, Raquel A Oliveira
eLife. 2017; 6: e26120. Published online 2017 May 6. doi: 10.7554/eLife.26120
PMCID:
PMC5451211
AbstractArticlePDF–3.3M

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