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Items: 1 to 20 of 62

1.
Histone locus bodies: a paradigm for how nuclear biomolecular condensates control cell cycle regulated gene expression
Mark S. Geisler, James P. Kemp, Jr., Robert J. Duronio
Nucleus. 2023; 14(1): 2293604. Published online 2023 Dec 14. doi: 10.1080/19491034.2023.2293604
PMCID:
PMC10730174
AbstractArticlePDF–1.0M
2.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
3.
Highly effective proximate labeling in Drosophila
Bo Zhang, Yuanbing Zhang, Ji-Long Liu
G3 (Bethesda) 2021 May; 11(5): jkab077. Published online 2021 Mar 16. doi: 10.1093/g3journal/jkab077
Correction in:
G3 (Bethesda). 2022 Mar; 12(3): jkac005.
PMCID:
PMC8104946
AbstractArticlePDF–1.1M
4.
A region of SLBP outside the mRNA-processing domain is essential for deposition of histone mRNA into the Drosophila egg
Jennifer Michelle Potter-Birriel, Graydon B. Gonsalvez, William F. Marzluff
J Cell Sci. 2021 Feb 1; 134(3): jcs251728. Published online 2021 Feb 11. doi: 10.1242/jcs.251728
PMCID:
PMC7888719
AbstractArticle
5.
CDK-regulated phase separation seeded by histone genes ensures precise growth and function of Histone Locus Bodies
Woonyung Hur, James P. Kemp, Jr., Marco Tarzia, Victoria E. Deneke, William F. Marzluff, Robert J. Duronio, Stefano Di Talia
Dev Cell. Author manuscript; available in PMC 2021 Aug 10.
Published in final edited form as: Dev Cell. 2020 Aug 10; 54(3): 379–394.e6. Published online 2020 Jun 23. doi: 10.1016/j.devcel.2020.06.003
PMCID:
PMC7423771
AbstractArticlePDF–3.1M
6.
Histone concentration regulates the cell cycle and transcription in early development
Sudarshan Chari, Henry Wilky, Jayalakshmi Govindan, Amanda A. Amodeo
Development. 2019 Oct 1; 146(19): dev177402. Published online 2019 Oct 4. doi: 10.1242/dev.177402
PMCID:
PMC7376747
AbstractArticle
7.
Cadmium-induced genome-wide DNA methylation changes in growth and oxidative metabolism in Drosophila melanogaster
De-Long Guan, Rui-Rui Ding, Xiao-Yu Hu, Xing-Ran Yang, Sheng-Quan Xu, Wei Gu, Min Zhang
BMC Genomics. 2019; 20: 356. Published online 2019 May 9. doi: 10.1186/s12864-019-5688-z
PMCID:
PMC6507226
AbstractArticlePDF–2.3M
8.
Protein composition of catalytically active U7-dependent processing complexes assembled on histone pre-mRNA containing biotin and a photo-cleavable linker
Aleksandra Skrajna, Xiao-cui Yang, Michał Dadlez, William F Marzluff, Zbigniew Dominski
Nucleic Acids Res. 2018 May 18; 46(9): 4752–4770. Published online 2018 Feb 26. doi: 10.1093/nar/gky133
PMCID:
PMC5961079
AbstractArticlePDF–3.0M
9.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
10.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
11.
Data for the generation of RNA spatiotemporal distributions and interpretation of Chk1 and SLBP protein depletion phenotypes during Drosophila embryogenesis
Fabio Alexis Lefebvre, Louis Philip Benoit Bouvrette, Julie Bergalet, Eric Lécuyer
Data Brief. 2017 Aug; 13: 28–31. Published online 2017 May 13. doi: 10.1016/j.dib.2017.05.008
PMCID:
PMC5440278
AbstractArticlePDF–155K
12.
U7 snRNP is recruited to histone pre-mRNA in a FLASH-dependent manner by two separate regions of the stem–loop binding protein
Aleksandra Skrajna, Xiao-cui Yang, Katarzyna Bucholc, Jun Zhang, Traci M. Tanaka Hall, Michał Dadlez, William F. Marzluff, Zbigniew Dominski
RNA. 2017 Jun; 23(6): 938–951. doi: 10.1261/rna.060806.117
PMCID:
PMC5435866
AbstractArticlePDF–1.2M
13.
FEM1 proteins are ancient regulators of SLBP degradation
John F. Dankert, Julia K. Pagan, Natalia G. Starostina, Edward T. Kipreos, Michele Pagano
Cell Cycle. 2017; 16(6): 556–564. Published online 2017 Jan 24. doi: 10.1080/15384101.2017.1284715
PMCID:
PMC5384579
AbstractArticlePDF–724K
14.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
15.
Drosophila Symplekin localizes dynamically to the histone locus body and tricellular junctions
Deirdre C Tatomer, Lindsay F Rizzardi, Kaitlin P Curry, Alison M Witkowski, William F Marzluff, Robert J Duronio
Nucleus. 2014; 5(6): 613–625. Published online 2014 Dec 10. doi: 10.4161/19491034.2014.990860
PMCID:
PMC4615279
AbstractArticlePDF–1.1M
16.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
17.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
18.
As the fat flies: the dynamic lipid droplets of Drosophila embryos
Michael A. Welte
Biochim Biophys Acta. Author manuscript; available in PMC 2016 Sep 1.
Published in final edited form as: Biochim Biophys Acta. 2015 Sep; 1851(9): 1156–1185. Published online 2015 Apr 13. doi: 10.1016/j.bbalip.2015.04.002
PMCID:
PMC4516585
AbstractArticlePDF–2.1M
19.
Distinct self-interaction domains promote Multi Sex Combs accumulation in and formation of the Drosophila histone locus body
Esteban A. Terzo, Shawn M. Lyons, John S. Poulton, Brenda R. S. Temple, William F. Marzluff, Robert J. Duronio
Mol Biol Cell. 2015 Apr 15; 26(8): 1559–1574. doi: 10.1091/mbc.E14-10-1445
Correction in:
Mol Biol Cell. 2015 Jul 1; 26(13): 2574.
PMCID:
PMC4395134
AbstractArticlePDF–2.8M
20.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K

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