PMC Links for GEO Profiles (Select 71256376) - PMC

Adam Hage, Preeti Bharaj, Sarah van Tol, Maria I. Giraldo, Maria Gonzalez-Orozco, Karl M. Valerdi, Abbey N. Warren, Leopoldo Aguilera-Aguirre, Xuping Xie, Steven G. Widen, Hong M. Moulton, Benhur Lee, Jeffrey R. Johnson, Nevan J. Krogan, Adolfo García-Sastre, Pei-Yong Shi, Alexander N. Freiberg, Ricardo Rajsbaum

Cell Rep. 2022 Mar 8; 38(10): 110434. Published online 2022 Mar 8. doi: 10.1016/j.celrep.2022.110434

PMCID:: PMC8903195

Abstract Article PDF–5.7M

Select item 88970225.

Histone deacetylase inhibitors inhibit cervical cancer growth through Parkin acetylation-mediated mitophagy

Xin Sun, Yuhan Shu, Guiqin Ye, Caixia Wu, Mengting Xu, Ruilan Gao, Dongsheng Huang, Jianbin Zhang

Acta Pharm Sin B. 2022 Feb; 12(2): 838–852. Published online 2021 Jul 21. doi: 10.1016/j.apsb.2021.07.003

PMCID:: PMC8897022

Abstract Article PDF–3.0M

Select item 81650306.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 79672677.

Tripartite motif-containing protein 6 facilitates growth and migration of breast cancer through degradation of STUB1

Chuanchao Wei, Jiayue Wu, Weiyan Liu, Jingfeng Lu, Hongchang Li, Benjun Hai

Eur J Histochem. 2021 Jan 20; 65(1): 3214. Published online 2021 Mar 10. doi: 10.4081/ejh.2021.3214

PMCID:: PMC7967267

Abstract Article PDF–1.3M

Select item 69882818.

TRIM6 promotes colorectal cancer cells proliferation and response to thiostrepton by TIS21/FoxM1

Shuier Zheng, Chenliang Zhou, Yonggang Wang, Hongtao Li, Yong Sun, Zan Shen

J Exp Clin Cancer Res. 2020; 39: 23. Published online 2020 Jan 28. doi: 10.1186/s13046-019-1504-5

Correction in:: J Exp Clin Cancer Res. 2022; 41: 221.

PMCID:: PMC6988281

Abstract Article PDF–7.2M

Select item 69552689.

VAMP8 Contributes to the TRIM6-Mediated Type I Interferon Antiviral Response during West Nile Virus Infection

Sarah van Tol, Colm Atkins, Preeti Bharaj, Kendra N. Johnson, Adam Hage, Alexander N. Freiberg, Ricardo Rajsbaum

J Virol. 2020 Jan; 94(2): e01454-19. Prepublished online 2019 Nov 6. Published online 2020 Jan 6. doi: 10.1128/JVI.01454-19

PMCID:: PMC6955268

Abstract Article PDF–2.5M

Select item 563060010.

Mammalian APE1 controls miRNA processing and its interactome is linked to cancer RNA metabolism

Giulia Antoniali, Fabrizio Serra, Lisa Lirussi, Mikiei Tanaka, Chiara D’Ambrosio, Shiheng Zhang, Slobodanka Radovic, Emiliano Dalla, Yari Ciani, Andrea Scaloni, Mengxia Li, Silvano Piazza, Gianluca Tell

Nat Commun. 2017; 8: 797. Published online 2017 Oct 6. doi: 10.1038/s41467-017-00842-8

PMCID:: PMC5630600

Abstract Article PDF–2.3M

Select item 557127211.

The Host E3-Ubiquitin Ligase TRIM6 Ubiquitinates the Ebola Virus VP35 Protein and Promotes Virus Replication

Preeti Bharaj, Colm Atkins, Priya Luthra, Maria Isabel Giraldo, Brian E. Dawes, Lisa Miorin, Jeffrey R. Johnson, Nevan J. Krogan, Christopher F. Basler, Alexander N. Freiberg, Ricardo Rajsbaum

J Virol. 2017 Sep 15; 91(18): e00833-17. Prepublished online 2017 Jul 5. Published online 2017 Aug 24. doi: 10.1128/JVI.00833-17

PMCID:: PMC5571272

Abstract Article PDF–2.9M

Select item 553161112.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 510420113.

TRIMs and Galectins globally cooperate and TRIM16 and Galectin-3 co-direct autophagy in endomembrane damage homeostasis

Santosh Chauhan, Suresh Kumar, Ashish Jain, Marisa Ponpuak, Michal H. Mudd, Tomonori Kimura, Seong Won Choi, Ryan Peters, Michael Mandell, Jack-Ansgar Bruun, Terje Johansen, Vojo Deretic

Dev Cell. Author manuscript; available in PMC 2017 Oct 10.

Published in final edited form as: Dev Cell. 2016 Oct 10; 39(1): 13–27. Published online 2016 Sep 29. doi: 10.1016/j.devcel.2016.08.003

PMCID:: PMC5104201

Abstract Article PDF–2.0M

Select item 502133314.

The Matrix Protein of Nipah Virus Targets the E3-Ubiquitin Ligase TRIM6 to Inhibit the IKKε Kinase-Mediated Type-I IFN Antiviral Response

Preeti Bharaj, Yao E. Wang, Brian E. Dawes, Tatyana E. Yun, Arnold Park, Benjamin Yen, Christopher F. Basler, Alexander N. Freiberg, Benhur Lee, Ricardo Rajsbaum

PLoS Pathog. 2016 Sep; 12(9): e1005880. Published online 2016 Sep 13. doi: 10.1371/journal.ppat.1005880

PMCID:: PMC5021333

Abstract Article PDF–4.2M

Select item 414666215.

TRIM proteins regulate autophagy and can target autophagic substrates by direct recognition

Michael A. Mandell, Ashish Jain, John Arko-Mensah, Santosh Chauhan, Tomonori Kimura, Christina Dinkins, Guido Silvestri, Jan Münch, Frank Kirchhoff, Anne Simonsen, Yongjie Wei, Beth Levine, Terje Johansen, Vojo Deretic

Dev Cell. Author manuscript; available in PMC 2015 Aug 25.

Published in final edited form as: Dev Cell. 2014 Aug 25; 30(4): 394–409. Published online 2014 Aug 7. doi: 10.1016/j.devcel.2014.06.013

PMCID:: PMC4146662

Abstract Article PDF–2.6M

Select item 411401916.

Unanchored K48-linked poly-ubiquitin synthesized by the E3-ubiquitin ligase TRIM6 stimulates the interferon-IKKε kinase mediated antiviral response

Ricardo Rajsbaum, Gijs A. Versteeg, Sonja Schmid, Ana M. Maestre, Alan Belicha-Villanueva, Carles Martínez-Romero, Jenish R. Patel, Juliet Morrison, Giuseppe Pisanelli, Lisa Miorin, Maudry Laurent-Rolle, Hong M. Moulton, David A. Stein, Ana Fernandez-Sesma, Benjamin R. tenOever, Adolfo García-Sastre

Immunity. Author manuscript; available in PMC 2015 Jun 19.

Published in final edited form as: Immunity. 2014 Jun 19; 40(6): 880–895. Published online 2014 May 29. doi: 10.1016/j.immuni.2014.04.018

PMCID:: PMC4114019

Abstract Article PDF–2.7M

Select item 390086117.

Binding of the Rhesus TRIM5α PRYSPRY Domain to Capsid is Necessary but not Sufficient for HIV-1 Restriction

Yang Yang, Alberto Branderiz-Nuñez, Thomas Fricke, Dmitri Ivanov, Zoe Sarnak, Felipe Diaz-Griffero

Virology. Author manuscript; available in PMC 2015 Jan 5.

Published in final edited form as: Virology. 2014 Jan 5; 448: 217–228. Published online 2013 Oct 31. doi: 10.1016/j.virol.2013.10.012

PMCID:: PMC3900861

Abstract Article PDF–846K

Select item 356108418.

Loci Associated with N-Glycosylation of Human Immunoglobulin G Show Pleiotropy with Autoimmune Diseases and Haematological Cancers

Gordan Lauc, Jennifer E. Huffman, Maja Pučić, Lina Zgaga, Barbara Adamczyk, Ana Mužinić, Mislav Novokmet, Ozren Polašek, Olga Gornik, Jasminka Krištić, Toma Keser, Veronique Vitart, Blanca Scheijen, Hae-Won Uh, Mariam Molokhia, Alan Leslie Patrick, Paul McKeigue, Ivana Kolčić, Ivan Krešimir Lukić, Olivia Swann, Frank N. van Leeuwen, L. Renee Ruhaak, Jeanine J. Houwing-Duistermaat, P. Eline Slagboom, Marian Beekman, Anton J. M. de Craen, André M. Deelder, Qiang Zeng, Wei Wang, Nicholas D. Hastie, Ulf Gyllensten, James F. Wilson, Manfred Wuhrer, Alan F. Wright, Pauline M. Rudd, Caroline Hayward, Yurii Aulchenko, Harry Campbell, Igor Rudan

PLoS Genet. 2013 Jan; 9(1): e1003225. Published online 2013 Jan 31. doi: 10.1371/journal.pgen.1003225

PMCID:: PMC3561084

Abstract Article PDF–1.0M

Select item 317805919.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 315104120.

Determinants of the Higher Order Association of the Restriction Factor TRIM5α and Other Tripartite Motif (TRIM) Proteins

Xing Li, Darwin F. Yeung, Ann M. Fiegen, Joseph Sodroski

J Biol Chem. 2011 Aug 12; 286(32): 27959–27970. Published online 2011 Jun 16. doi: 10.1074/jbc.M111.260406

PMCID:: PMC3151041

Abstract Article PDF–2.1M

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