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Select item 94378481.

Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans

Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono

J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343

PMCID:: PMC9437848

Abstract Article PDF–2.0M

Select item 91970402.

Daf-16 mediated repression of cytosolic ribosomal protein genes facilitates a hypoxia sensitive to hypoxia resistant transformation in long-lived germline mutants

Cassidy Hemphill, Evye Pylarinou-Sinclair, Omar Itani, Barbara Scott, C. Michael Crowder, Marc Ryan Van Gilst

PLoS Genet. 2022 May; 18(5): e1009672. Published online 2022 May 27. doi: 10.1371/journal.pgen.1009672

PMCID:: PMC9197040

Abstract Article PDF–2.9M

Select item 84467933.

Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling

Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono

J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094

Correction in:: J Biol Chem. 2022 Jun; 298(6): 102081.

PMCID:: PMC8446793

Abstract Article PDF–1.6M

Select item 83311834.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 79951765.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 78557446.

Coordinate Regulation of Ribosome and tRNA Biogenesis Controls Hypoxic Injury and Translation

Omar A Itani, Xuefei Zhong, Xiaoting Tang, Barbara A. Scott, Jun Yi Yan, Stephane Flibotte, Yiting Lim, Andrew C. Hsieh, James E. Bruce, Marc Van Gilst, C. Michael Crowder

Curr Biol. Author manuscript; available in PMC 2022 Jan 11.

Published in final edited form as: Curr Biol. 2021 Jan 11; 31(1): 128–137.e5. Published online 2020 Nov 5. doi: 10.1016/j.cub.2020.10.001

Correction in:: Curr Biol. 2022 Dec 19; 32(24): 5433.

PMCID:: PMC7855744

Abstract Article PDF–738K

Select item 63062987.

Size scaling of nucleolus in Caenorhabditis elegans embryos

Tian-Hsiang Ma, Po-Hsiang Chen, Bertrand Chin-Ming Tan, Szecheng J. Lo

Biomed J. 2018 Oct; 41(5): 333–336. Published online 2018 Nov 6. doi: 10.1016/j.bj.2018.07.003

PMCID:: PMC6306298

Abstract Article PDF–648K

Select item 62165908.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 55823499.

Small nucleoli are a cellular hallmark of longevity

Varnesh Tiku, Chirag Jain, Yotam Raz, Shuhei Nakamura, Bree Heestand, Wei Liu, Martin Späth, H. Eka. D. Suchiman, Roman-Ulrich Müller, P. Eline Slagboom, Linda Partridge, Adam Antebi

Nat Commun. 2017; 8: 16083. Published online 2017 Aug 30. doi: 10.1038/ncomms16083

PMCID:: PMC5582349

Abstract Article PDF–1.2M

Select item 556080410.

LIN-41 and OMA Ribonucleoprotein Complexes Mediate a Translational Repression-to-Activation Switch Controlling Oocyte Meiotic Maturation and the Oocyte-to-Embryo Transition in Caenorhabditis elegans

Tatsuya Tsukamoto, Micah D. Gearhart, Caroline A. Spike, Gabriela Huelgas-Morales, Makaela Mews, Peter R. Boag, Traude H. Beilharz, David Greenstein

Genetics. 2017 Aug; 206(4): 2007–2039. Published online 2017 Jun 1. doi: 10.1534/genetics.117.203174

PMCID:: PMC5560804

Abstract Article PDF–3.9M

Select item 535876111.

A microRNA family exerts maternal control on sex determination in C. elegans

Katherine McJunkin, Victor Ambros

Genes Dev. 2017 Feb 15; 31(4): 422–437. doi: 10.1101/gad.290155.116

PMCID:: PMC5358761

Abstract Article PDF–1.7M

Select item 491687412.

Genetic control of nucleolar size: An evolutionary perspective

Tian-Hsiang Ma, Li-Wei Lee, Chi-Chang Lee, Yung-Hsiang Yi, Shih-Peng Chan, Bertrand Chin-Ming Tan, Szecheng J. Lo

Nucleus. 2016; 7(2): 112–120. Published online 2016 Mar 22. doi: 10.1080/19491034.2016.1166322

PMCID:: PMC4916874

Abstract Article PDF–790K

Select item 482745213.

Fourier transform infrared microspectroscopy for the analysis of the biochemical composition of C. elegans worms

Ming Sheng, András Gorzsás, Simon Tuck

Worm. 2016 Jan-Mar; 5(1): e1132978. Published online 2016 Feb 18. doi: 10.1080/21624054.2015.1132978

PMCID:: PMC4827452

Abstract Article PDF–1.3M

Select item 478111114.

Transcriptional regulation.

Peter G Okkema, Michael Krause

WormBook. 2005 : 1–40. Published online 2005 Dec 23. doi: 10.1895/wormbook.1.45.1

PMCID:: PMC4781111

Abstract Article

Select item 478097315.

Nomarski images for learning the anatomy, with tips for mosaic analysis.

John K Yochem

WormBook. 2006 : 1–47. Published online 2006 Jan 24. doi: 10.1895/wormbook.1.100.1

PMCID:: PMC4780973

Article

Select item 461965516.

A Genetic Cascade of let-7-ncl-1-fib-1 Modulates Nucleolar Size and rRNA Pool in Caenorhabditis elegans

Yung-Hsiang Yi, Tian-Hsiang Ma, Li-Wei Lee, Pey-Tsyr Chiou, Po-Hsiang Chen, Ching-Ming Lee, Yu-De Chu, Hsiang Yu, Kuei-Ching Hsiung, Yi-Tzang Tsai, Chi-Chang Lee, Yu-Sun Chang, Shih-Peng Chan, Bertrand Chin-Ming Tan, Szecheng J. Lo

PLoS Genet. 2015 Oct; 11(10): e1005580. Published online 2015 Oct 22. doi: 10.1371/journal.pgen.1005580

PMCID:: PMC4619655

Abstract Article PDF–8.3M

Select item 439057917.

Conserved RNA-Binding Proteins Required for Dendrite Morphogenesis in Caenorhabditis elegans Sensory Neurons

Simona Antonacci, Daniel Forand, Margaret Wolf, Courtney Tyus, Julia Barney, Leah Kellogg, Margo A. Simon, Genevieve Kerr, Kristen L. Wells, Serena Younes, Nathan T. Mortimer, Eugenia C. Olesnicky, Darrell J. Killian

G3 (Bethesda) 2015 Apr; 5(4): 639–653. Published online 2015 Feb 10. doi: 10.1534/g3.115.017327

PMCID:: PMC4390579

Abstract Article PDF–2.3M

Select item 401013618.

MUT-14 and SMUT-1 DEAD box RNA helicases have overlapping roles in germline RNAi and endogenous siRNA formation

Carolyn M. Phillips, Brooke E. Montgomery, Peter C. Breen, Elke F. Roovers, Young-Soo Rim, Toshiro K. Ohsumi, Martin A. Newman, Josien C. van Wolfswinkel, Rene F. Ketting, Gary Ruvkun, Taiowa A. Montgomery

Curr Biol. Author manuscript; available in PMC 2015 Apr 14.

Published in final edited form as: Curr Biol. 2014 Apr 14; 24(8): 839–844. Published online 2014 Mar 27. doi: 10.1016/j.cub.2014.02.060