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Items: 1 to 20 of 47

1.
Loss of Mptx2 alters bacteria composition and intestinal homeostasis potentially by impairing autophagy
Weihui Yan, Shanshan Chen, Ying Wang, Yaying You, Ying Lu, Weipeng Wang, Bo Wu, Jun Du, Shicheng Peng, Wei Cai, Yongtao Xiao
Commun Biol. 2024; 7: 94. Published online 2024 Jan 13. doi: 10.1038/s42003-024-05785-7
PMCID:
PMC10787791
AbstractArticlePDF–21M
2.
Autophagy in PDGFRα+ mesenchymal cells is essential for intestinal stem cell survival
Yang Yang, Maria Gomez, Timothy Marsh, Laura Poillet-Perez, Akshada Sawant, Lei Chen, Noel R. Park, S. RaElle Jackson, Zhixian Hu, Noa Alon, Chen Liu, Jayanta Debnath, Jun-Lin Guan, Shawn Davidson, Michael Verzi, Eileen White
Proc Natl Acad Sci U S A. 2022 May 24; 119(21): e2202016119. Published online 2022 May 10. doi: 10.1073/pnas.2202016119
PMCID:
PMC9173755
AbstractArticlePDF–4.1M
3.
The ATG5 interactome links clathrin-mediated vesicular trafficking with the autophagosome assembly machinery
Kiren Baines, Kazuaki Yoshioka, Yoh Takuwa, Jon D. Lane
Autophagy Rep. 2022; 1(1): 88–118. Published online 2022 Apr 7. doi: 10.1080/27694127.2022.2042054
PMCID:
PMC9015699
AbstractArticlePDF–3.3M
4.
Functional genomic landscape of cancer-intrinsic evasion of killing by T cells
Keith A. Lawson, Cristovão M. Sousa, Xiaoyu Zhang, Eiru Kim, Rummy Akthar, Joseph J. Caumanns, Yuxi Yao, Nicholas Mikolajewicz, Catherine Ross, Kevin R. Brown, Abdelrahman Abou Zid, Zi Peng Fan, Shirley Hui, Jordan A. Krall, Donald M. Simons, Chloe J. Slater, Victor De Jesus, Lujia Tang, Richa Singh, Joshua E. Goldford, Sarah Martin, Qian Huang, Elizabeth A. Francis, Andrea Habsid, Ryan Climie, David Tieu, Jiarun Wei, Ren Li, Amy Hin Yan Tong, Michael Aregger, Katherine S. Chan, Hong Han, Xiaowei Wang, Patricia Mero, John H. Brumell, Antonio Finelli, Laurie Ailles, Gary Bader, Gromoslaw A. Smolen, Gillian A. Kingsbury, Traver Hart, Charles Kung, Jason Moffat
Nature. Author manuscript; available in PMC 2022 Apr 18.
Published in final edited form as: Nature. 2020 Oct; 586(7827): 120–126. Published online 2020 Sep 23. doi: 10.1038/s41586-020-2746-2
PMCID:
PMC9014559
AbstractArticlePDF–6.6M
5.
Autophagy in stromal fibroblasts promotes tumor desmoplasia and mammary tumorigenesis
Jenny A. Rudnick, Teresa Monkkonen, Florie A. Mar, James M. Barnes, Hanna Starobinets, Juliet Goldsmith, Srirupa Roy, Sofía Bustamante Eguiguren, Valerie M. Weaver, Jayanta Debnath
Genes Dev. 2021 Jul 1; 35(13-14): 963–975. doi: 10.1101/gad.345629.120
PMCID:
PMC8247603
AbstractArticlePDF–36M
6.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
7.
Augmented BMP signaling commits cranial neural crest cells to a chondrogenic fate by suppressing autophagic β-catenin degradation
Jingwen Yang, Megumi Kitami, Haichun Pan, Masako Toda Nakamura, Honghao Zhang, Fei Liu, Lingxin Zhu, Yoshihiro Komatsu, Yuji Mishina
Sci Signal. Author manuscript; available in PMC 2021 Jul 12.
Published in final edited form as: Sci Signal. 2021 Jan 12; 14(665): eaaz9368. Published online 2021 Jan 12. doi: 10.1126/scisignal.aaz9368
PMCID:
PMC7936468
AbstractArticlePDF–4.0M
8.
Scanning Electron-Assisted Dielectric Microscopy Reveals Autophagosome Formation by LC3 and ATG12 in Cultured Mammalian Cells
Tomoko Okada, Toshihiko Ogura
Int J Mol Sci. 2021 Feb; 22(4): 1834. Published online 2021 Feb 12. doi: 10.3390/ijms22041834
PMCID:
PMC7917705
AbstractArticlePDF–3.9M
9.
BIRC5/Survivin is a novel ATG12–ATG5 conjugate interactor and an autophagy-induced DNA damage suppressor in human cancer and mouse embryonic fibroblast cells
Tzu-Yu Lin, Hsiu-Han Chan, Shang-Hung Chen, Sailu Sarvagalla, Pai-Sheng Chen, Mohane Selvaraj Coumar, Siao Muk Cheng, Yung-Chieh Chang, Chun-Hui Lin, Euphemia Leung, Chun Hei Antonio Cheung
Autophagy. 2020; 16(7): 1296–1313. Published online 2019 Oct 15. doi: 10.1080/15548627.2019.1671643
PMCID:
PMC7469615
AbstractArticlePDF–15M
10.
Ribosome profiling reveals a functional role for autophagy in mRNA translational control
Juliet Goldsmith, Timothy Marsh, Saurabh Asthana, Andrew M. Leidal, Deepthisri Suresh, Adam Olshen, Jayanta Debnath
Commun Biol. 2020; 3: 388. Published online 2020 Jul 17. doi: 10.1038/s42003-020-1090-2
PMCID:
PMC7367890
AbstractArticlePDF–3.0M
11.
The endoplasmic reticulum stress-autophagy pathway controls hypothalamic development and energy balance regulation in leptin-deficient neonates
Soyoung Park, Aleek Aintablian, Berengere Coupe, Sebastien G. Bouret
Nat Commun. 2020; 11: 1914. Published online 2020 Apr 20. doi: 10.1038/s41467-020-15624-y
PMCID:
PMC7171135
AbstractArticlePDF–4.5M
12.
Autophagic Degradation of NBR1 Restricts Metastatic Outgrowth During Mammary Tumor Progression
Timothy Marsh, Candia M. Kenific, Deepthisri Suresh, Hugo Gonzalez, Eliah R. Shamir, Wenbin Mei, Alexandra Tankka, Andrew M. Leidal, Sandhya Kalavacherla, Kimberly Woo, Zena Werb, Jayanta Debnath
Dev Cell. Author manuscript; available in PMC 2021 Mar 9.
Published in final edited form as: Dev Cell. 2020 Mar 9; 52(5): 591–604.e6. Published online 2020 Feb 20. doi: 10.1016/j.devcel.2020.01.025
PMCID:
PMC7108946
AbstractArticlePDF–3.0M
13.
ATG5 is required for B cell polarization and presentation of particulate antigens
Florent Arbogast, Johan Arnold, Philippe Hammann, Lauriane Kuhn, Johana Chicher, Diane Murera, Justine Weishaar, Sylviane Muller, Jean-Daniel Fauny, Frédéric Gros
Autophagy. 2019; 15(2): 280–294. Published online 2018 Sep 22. doi: 10.1080/15548627.2018.1516327
PMCID:
PMC6333460
AbstractArticlePDF–2.7M
14.
Short-lived AUF1 p42-binding mRNAs of RANKL and BCL6 have two distinct instability elements each
Afzal M. Dogar, Ramona Pauchard-Batschulat, Barbara Grisoni-Neupert, Larry Richman, Alexandra Paillusson, Sylvain Pradervand, Otto Hagenbüchle, Giovanna Ambrosini, Christoph D. Schmid, Philipp Bucher, Lukas C. Kühn
PLoS One. 2018; 13(11): e0206823. Published online 2018 Nov 12. doi: 10.1371/journal.pone.0206823
PMCID:
PMC6231638
AbstractArticlePDF–3.8M
15.
miR-23a downregulation modulates the inflammatory response by targeting ATG12-mediated autophagy
Xiang Si, Daiyin Cao, Juan Chen, Yao Nie, Zhiyi Jiang, Min-Ying Chen, Jian-Feng Wu, Xiang-Dong Guan
Mol Med Rep. 2018 Aug; 18(2): 1524–1530. Published online 2018 May 29. doi: 10.3892/mmr.2018.9081
PMCID:
PMC6072189
AbstractArticlePDF–1.2M
16.
Mir505–3p regulates axonal development via inhibiting the autophagy pathway by targeting Atg12
Kan Yang, Bin Yu, Cheng Cheng, Tianlin Cheng, Bo Yuan, Kai Li, Junhua Xiao, Zilong Qiu, Yuxun Zhou
Autophagy. 2017; 13(10): 1679–1696. Published online 2017 Aug 18. doi: 10.1080/15548627.2017.1353841
PMCID:
PMC5640177
AbstractArticlePDF–2.4M
17.
Beige adipocyte maintenance is regulated by autophagy-induced mitochondrial clearance
Svetlana Altshuler-Keylin, Kosaku Shinoda, Yutaka Hasegawa, Kenji Ikeda, Haemin Hong, Qianqian Kang, Yangyu Yang, Rushika M. Perera, Jayanta Debnath, Shingo Kajimura
Cell Metab. Author manuscript; available in PMC 2017 Sep 13.
Published in final edited form as: Cell Metab. 2016 Sep 13; 24(3): 402–419. Published online 2016 Aug 25. doi: 10.1016/j.cmet.2016.08.002
PMCID:
PMC5023491
AbstractArticlePDF–2.1M
18.
miR-30b inhibits autophagy to alleviate hepatic ischemia-reperfusion injury via decreasing the Atg12-Atg5 conjugate
Shi-Peng Li, Jin-Dan He, Zhen Wang, Yao Yu, Shu-Yu Fu, Hai-Ming Zhang, Jian-Jun Zhang, Zhong-Yang Shen
World J Gastroenterol. 2016 May 14; 22(18): 4501–4514. Published online 2016 May 14. doi: 10.3748/wjg.v22.i18.4501
PMCID:
PMC4858632
AbstractArticlePDF–2.1M
19.
EVA1A/TMEM166 Regulates Embryonic Neurogenesis by Autophagy
Mengtao Li, Guang Lu, Jia Hu, Xue Shen, Jiabao Ju, Yuanxu Gao, Liujing Qu, Yan Xia, Yingyu Chen, Yun Bai
Stem Cell Reports. 2016 Mar 8; 6(3): 396–410. Published online 2016 Feb 18. doi: 10.1016/j.stemcr.2016.01.011
PMCID:
PMC4788774
AbstractArticlePDF–5.7M
20.
Loss of Atg12, but not Atg5, in pro-opiomelanocortin neurons exacerbates diet-induced obesity
Ritu Malhotra, James P Warne, Eduardo Salas, Allison W Xu, Jayanta Debnath
Autophagy. 2015 Jan; 11(1): 145–154. Published online 2015 Jan 13. doi: 10.1080/15548627.2014.998917
PMCID:
PMC4502780
AbstractArticlePDF–922K

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