PMC Links for GEO Profiles (Select 76691264) - PMC

Select item 80152531.

A developmental lineage-based gene co-expression network for mouse pancreatic β-cells reveals a role for Zfp800 in pancreas development

Anna B. Osipovich, Karrie D. Dudek, Emily Greenfest-Allen, Jean-Philippe Cartailler, Elisabetta Manduchi, Leah Potter Case, Eunyoung Choi, Austin G. Chapman, Hannah W. Clayton, Guoqiang Gu, Christian J. Stoeckert, Jr, Mark A. Magnuson

Development. 2021 Mar 15; 148(6): dev196964. Published online 2021 Mar 22. doi: 10.1242/dev.196964

PMCID:: PMC8015253

Abstract Article

Select item 77757612.

Abnormal neocortex arealization and Sotos-like syndrome–associated behavior in Setd2 mutant mice

Lichao Xu, Yue Zheng, Xuejing Li, Andi Wang, Dawei Huo, Qinglan Li, Shikang Wang, Zhiyuan Luo, Ying Liu, Fuqiang Xu, Xudong Wu, Min Wu, Yan Zhou

Sci Adv. 2021 Jan; 7(1): eaba1180. Published online 2021 Jan 1. doi: 10.1126/sciadv.aba1180

PMCID:: PMC7775761

Abstract Article PDF–11M

Select item 73734313.

Clustered gamma-protocadherins regulate cortical interneuron programmed cell death

Walter R Mancia Leon, Julien Spatazza, Benjamin Rakela, Ankita Chatterjee, Viraj Pande, Tom Maniatis, Andrea R Hasenstaub, Michael P Stryker, Arturo Alvarez-Buylla

eLife. 2020; 9: e55374. Published online 2020 Jul 7. doi: 10.7554/eLife.55374

PMCID:: PMC7373431

Abstract Article PDF–11M

Select item 63316524.

CTCF Governs the Identity and Migration of MGE-Derived Cortical Interneurons

Adrienne Elbert, Daniel Vogt, Ashley Watson, Michael Levy, Yan Jiang, Emilie Brûlé, Megan E. Rowland, John Rubenstein, Nathalie G. Bérubé

J Neurosci. 2019 Jan 2; 39(1): 177–192. doi: 10.1523/JNEUROSCI.3496-17.2018

PMCID:: PMC6331652

Abstract Article PDF–5.8M

Select item 51795465.

Distinct and Cooperative Functions for the Protocadherin-α, -β and -γ Clusters in Neuronal Survival and Axon Targeting

Sonoko Hasegawa, Makiko Kumagai, Mitsue Hagihara, Hiroshi Nishimaru, Keizo Hirano, Ryosuke Kaneko, Atsushi Okayama, Teruyoshi Hirayama, Makoto Sanbo, Masumi Hirabayashi, Masahiko Watanabe, Takahiro Hirabayashi, Takeshi Yagi

Front Mol Neurosci. 2016; 9: 155. Published online 2016 Dec 23. doi: 10.3389/fnmol.2016.00155

PMCID:: PMC5179546

Abstract Article PDF–9.2M

Select item 38258066.

Reduction of Nipbl impairs cohesin loading locally and affects transcription but not cohesion-dependent functions in a mouse model of Cornelia de Lange Syndrome

Silvia Remeseiro, Ana Cuadrado, Shimako Kawauchi, Anne L. Calof, Arthur D. Lander, Ana Losada

Biochim Biophys Acta. Author manuscript; available in PMC 2014 Dec 1.

Published in final edited form as: Biochim Biophys Acta. 2013 Dec; 1832(12): 10.1016/j.bbadis.2013.07.020. Published online 2013 Aug 3. doi: 10.1016/j.bbadis.2013.07.020

PMCID:: PMC3825806

Abstract Article PDF–912K

Select item 34315977.

Single-neuron diversity generated by Protocadherin-β cluster in mouse central and peripheral nervous systems

Keizo Hirano, Ryosuke Kaneko, Takeshi Izawa, Masahumi Kawaguchi, Takashi Kitsukawa, Takeshi Yagi

Front Mol Neurosci. 2012; 5: 90. Prepublished online 2012 Aug 9. Published online 2012 Aug 31. doi: 10.3389/fnmol.2012.00090

PMCID:: PMC3431597

Abstract Article PDF–2.6M

Select item 33434638.

A unique role of cohesin-SA1 in gene regulation and development

Silvia Remeseiro, Ana Cuadrado, Gonzalo Gómez-López, David G Pisano, Ana Losada

EMBO J. 2012 May 2; 31(9): 2090–2102. Published online 2012 Mar 13. doi: 10.1038/emboj.2012.60

PMCID:: PMC3343463

Abstract Article PDF–2.9M

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 302253410.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 141356811.

BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System

Susan Magdaleno, Patricia Jensen, Craig L Brumwell, Anna Seal, Karen Lehman, Andrew Asbury, Tony Cheung, Tommie Cornelius, Diana M Batten, Christopher Eden, Shannon M Norland, Dennis S Rice, Nilesh Dosooye, Sundeep Shakya, Perdeep Mehta, Tom Curran

PLoS Biol. 2006 Apr; 4(4): e86. Published online 2006 Mar 28. doi: 10.1371/journal.pbio.0040086

PMCID:: PMC1413568

Article PDF–99K

Select item 31104812.

Comparative DNA Sequence Analysis of Mouse and Human Protocadherin Gene Clusters

Qiang Wu, Theresa Zhang, Jan-Fang Cheng, Youngwook Kim, Jane Grimwood, Jeremy Schmutz, Mark Dickson, James P. Noonan, Michael Q. Zhang, Richard M. Myers, Tom Maniatis

Genome Res. 2001 Mar; 11(3): 389–404. doi: 10.1101/gr.167301

PMCID:: PMC311048

Abstract Article PDF–1.7M

Select item 31099213.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098014.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924115.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 1620316.

Large exons encoding multiple ectodomains are a characteristic feature of protocadherin genes

Qiang Wu, Tom Maniatis

Proc Natl Acad Sci U S A. 2000 Mar 28; 97(7): 3124–3129. Published online 2000 Mar 14. doi: 10.1073/pnas.060027397

PMCID:: PMC16203

Abstract Article PDF–254K

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