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Select item 114057581.

PRDM3/16 regulate chromatin accessibility required for NKX2-1 mediated alveolar epithelial differentiation and function

Hua He, Sheila M. Bell, Ashley Kuenzi Davis, Shuyang Zhao, Anusha Sridharan, Cheng-Lun Na, Minzhe Guo, Yan Xu, John Snowball, Daniel T. Swarr, William J. Zacharias, Jeffrey A. Whitsett

Nat Commun. 2024; 15: 8112. Published online 2024 Sep 16. doi: 10.1038/s41467-024-52154-3

PMCID:: PMC11405758

Abstract Article PDF–11M

Select item 110749812.

Macrophage/microglia-producing transient increase of platelet-activating factor is involved in neuropathic pain

Shota Yamamoto, Tomomi Hashidate-Yoshida, Yuki Yoshinari, Takao Shimizu, Hideo Shindou

iScience. 2024 Apr 19; 27(4): 109466. Published online 2024 Apr 1. doi: 10.1016/j.isci.2024.109466

PMCID:: PMC11074981

Abstract Article PDF–3.2M

Select item 109176603.

Genetic determinants of micronucleus formation in vivo

D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus

Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0

PMCID:: PMC10917660

Abstract Article PDF–4.8M

Select item 102852274.

LPGAT1/LPLAT7 regulates acyl chain profiles at the sn-1 position of phospholipids in murine skeletal muscles

Tomoki Sato, Shuhei Umebayashi, Nanami Senoo, Takumi Akahori, Hiyori Ichida, Noriyuki Miyoshi, Takuya Yoshida, Yuki Sugiura, Naoko Goto-Inoue, Hiroki Kawana, Hideo Shindou, Takashi Baba, Yuki Maemoto, Yasutomi Kamei, Takao Shimizu, Junken Aoki, Shinji Miura

J Biol Chem. 2023 Jul; 299(7): 104848. Published online 2023 May 20. doi: 10.1016/j.jbc.2023.104848

PMCID:: PMC10285227

Abstract Article PDF–3.1M

Select item 91361055.

Lysophosphatidylcholine acyltransferase 1 controls mitochondrial reactive oxygen species generation and survival of retinal photoreceptor cells

Katsuyuki Nagata, Daisuke Hishikawa, Hiroshi Sagara, Masamichi Saito, Sumiko Watanabe, Takao Shimizu, Hideo Shindou

J Biol Chem. 2022 Jun; 298(6): 101958. Published online 2022 Apr 20. doi: 10.1016/j.jbc.2022.101958

PMCID:: PMC9136105

Abstract Article PDF–1.4M

Select item 79387706.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 74159917.

BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)

Kou Motani, Hidetaka Kosako

J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323

PMCID:: PMC7415991

Abstract Article PDF–2.0M

Select item 72270288.

Mouse Models of Inherited Retinal Degeneration with Photoreceptor Cell Loss

Gayle B. Collin, Navdeep Gogna, Bo Chang, Nattaya Damkham, Jai Pinkney, Lillian F. Hyde, Lisa Stone, Jürgen K. Naggert, Patsy M. Nishina, Mark P. Krebs

Cells. 2020 Apr; 9(4): 931. Published online 2020 Apr 10. doi: 10.3390/cells9040931

PMCID:: PMC7227028

Abstract Article PDF–5.4M

Select item 70533419.

ROBO4 deletion ameliorates PAF-mediated skin inflammation via regulating the mRNA translation efficiency of LPCAT1/LPCAT2 and the expression of PAF receptor

Xiaoqiang Xiao, Xi Zhuang, Ciyan Xu, Haoyu Chen, Weiquan Zhu, ChiPui Pang, Mingzhi Zhang

Int J Biol Sci. 2020; 16(6): 1086–1095. Published online 2020 Feb 4. doi: 10.7150/ijbs.35797

PMCID:: PMC7053341

Abstract Article PDF–1.2M

Select item 652671510.

Yap and its subcellular localization have distinct compartment-specific roles in the developing lung

Benjamin J. van Soldt, Jun Qian, Jiao Li, Nan Tang, Jining Lu, Wellington V. Cardoso

Development. 2019 May 1; 146(9): dev175810. Published online 2019 May 1. doi: 10.1242/dev.175810

PMCID:: PMC6526715

Abstract Article

Select item 538122611.

Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function

Tingting Zhang, Wei Du, Andrew F. Wilson, Satoshi H. Namekawa, Paul R. Andreassen, Amom Ruhikanta Meetei, Qishen Pang

Sci Rep. 2017; 7: 45626. Published online 2017 Apr 5. doi: 10.1038/srep45626

PMCID:: PMC5381226

Abstract Article PDF–1.4M

Select item 526684712.

The Degeneration and Apoptosis Patterns of Cone Photoreceptors in rd11 Mice

Hua Zhang, Xia Li, Xufeng Dai, Juanjuan Han, Yangyang Zhang, Yan Qi, Ying He, Yan Liu, Bo Chang, Ji-jing Pang

J Ophthalmol. 2017; 2017: 9721362. Published online 2017 Jan 12. doi: 10.1155/2017/9721362

PMCID:: PMC5266847

Abstract Article PDF–5.8M

Select item 508763913.

Lung epithelial tip progenitors integrate glucocorticoid- and STAT3-mediated signals to control progeny fate

Usua Laresgoiti, Marko Z. Nikolić, Chandrika Rao, Jane L. Brady, Rachel V. Richardson, Emma J. Batchen, Karen E. Chapman, Emma L. Rawlins

Development. 2016 Oct 15; 143(20): 3686–3699. doi: 10.1242/dev.134023

PMCID:: PMC5087639

Abstract Article

Select item 488204414.

Effects of Subretinal Gene Transfer at Different Time Points in a Mouse Model of Retinal Degeneration

Xufeng Dai, Hua Zhang, Juanjuan Han, Ying He, Yangyang Zhang, Yan Qi, Ji-jing Pang

PLoS One. 2016; 11(5): e0156542. Published online 2016 May 26. doi: 10.1371/journal.pone.0156542

PMCID:: PMC4882044

Abstract Article PDF–15M

Select item 459835615.

Maternal bile acid transporter deficiency promotes neonatal demise

Yuanyuan Zhang, Fei Li, Yao Wang, Aaron Pitre, Zhong-ze Fang, Matthew W. Frank, Christopher Calabrese, Kristopher W. Krausz, Geoffrey Neale, Sharon Frase, Peter Vogel, Charles O. Rock, Frank J. Gonzalez, John D. Schuetz

Nat Commun. 2015; 6: 8186. Published online 2015 Sep 29. doi: 10.1038/ncomms9186

PMCID:: PMC4598356

Abstract Article PDF–1.5M

Select item 456367816.

Steroid receptor coactivators 1 and 2 mediate fetal-to-maternal signaling that initiates parturition

Lu Gao, Elizabeth H. Rabbitt, Jennifer C. Condon, Nora E. Renthal, John M. Johnston, Matthew A. Mitsche, Pierre Chambon, Jianming Xu, Bert W. O’Malley, Carole R. Mendelson

J Clin Invest. 2015 Jul 1; 125(7): 2808–2824. Published online 2015 Jun 22. doi: 10.1172/JCI78544

PMCID:: PMC4563678

Abstract Article PDF–3.5M

Select item 451311517.

Lysophosphatidylcholine Acyltransferase 1 (LPCAT1) Specifically Interacts with Phospholipid Transfer Protein StarD10 to Facilitate Surfactant Phospholipid Trafficking in Alveolar Type II Cells

Sui Lin, Machiko Ikegami, Changsuk Moon, Anjaparavanda P. Naren, John M. Shannon

J Biol Chem. 2015 Jul 24; 290(30): 18559–18574. Published online 2015 Jun 5. doi: 10.1074/jbc.M115.666701

PMCID:: PMC4513115

Abstract Article PDF–7.6M

Select item 396893118.

AAV-Mediated Lysophosphatidylcholine Acyltransferase 1 (Lpcat1) Gene Replacement Therapy Rescues Retinal Degeneration in rd11 Mice

Xufeng Dai, Juanjuan Han, Yan Qi, Hua Zhang, Lue Xiang, Jineng Lv, Jie Li, Wen-Tao Deng, Bo Chang, William W. Hauswirth, Ji-jing Pang

Invest Ophthalmol Vis Sci. 2014 Mar; 55(3): 1724–1734. Published online 2014 Mar 20. doi: 10.1167/iovs.13-13654

PMCID:: PMC3968931

Abstract Article PDF–1.1M

Select item 396495519.

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data

Gautier Koscielny, Gagarine Yaikhom, Vivek Iyer, Terrence F. Meehan, Hugh Morgan, Julian Atienza-Herrero, Andrew Blake, Chao-Kung Chen, Richard Easty, Armida Di Fenza, Tanja Fiegel, Mark Grifiths, Alan Horne, Natasha A. Karp, Natalja Kurbatova, Jeremy C. Mason, Peter Matthews, Darren J. Oakley, Asfand Qazi, Jack Regnart, Ahmad Retha, Luis A. Santos, Duncan J. Sneddon, Jonathan Warren, Henrik Westerberg, Robert J. Wilson, David G. Melvin, Damian Smedley, Steve D. M. Brown, Paul Flicek, William C. Skarnes, Ann-Marie Mallon, Helen Parkinson

Nucleic Acids Res. 2014 Jan 1; 42(Database issue): D802–D809. Published online 2013 Nov 3. doi: 10.1093/nar/gkt977

PMCID:: PMC3964955

Abstract Article PDF–5.7M

Select item 358154620.

Hypoxia Inducible Factor 3α Plays a Critical Role in Alveolarization and Distal Epithelial Cell Differentiation during Mouse Lung Development

Yadi Huang, Joshua Kapere Ochieng, Marjon Buscop-van Kempen, Anne Boerema-de Munck, Sigrid Swagemakers, Wilfred van IJcken, Frank Grosveld, Dick Tibboel, Robbert J. Rottier

PLoS One. 2013; 8(2): e57695. Published online 2013 Feb 25. doi: 10.1371/journal.pone.0057695

Correction in:: PLoS One. 2015; 10(3): e0119359.

PMCID:: PMC3581546

Abstract Article PDF–8.8M

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