PMC Links for GEO Profiles (Select 83592052) - PMC

Select item 95291881.

Transcription Factors YAP/TAZ and SRF Cooperate To Specify Renal Myofibroblasts in the Developing Mouse Kidney

Keri A. Drake, Christopher Chaney, Mohita Patel, Amrita Das, Julia Bittencourt, Martin Cohn, Thomas J. Carroll

J Am Soc Nephrol. 2022 Sep; 33(9): 1694–1707. Published online 2022 Sep. doi: 10.1681/ASN.2021121559

Correction in:: J Am Soc Nephrol. 2023 Mar; 34(3): 515–516.

PMCID:: PMC9529188

Abstract Article

Select item 74380112.

Identification and characterization of cellular heterogeneity within the developing renal interstitium

Alicia R. England, Christopher P. Chaney, Amrita Das, Mohita Patel, Alicia Malewska, Daniel Armendariz, Gary C. Hon, Douglas W. Strand, Keri A. Drake, Thomas J. Carroll

Development. 2020 Aug 1; 147(15): dev190108. Published online 2020 Aug 14. doi: 10.1242/dev.190108

PMCID:: PMC7438011

Abstract Article

Select item 63663303.

Genetic segregation of airway disease traits despite redundancy of calcium-activated chloride channel family members

Anand C. Patel, Jeffrey D. Morton, Edy Y. Kim, Yael Alevy, Suzanne Swanson, Jennifer Tucker, Guaming Huang, Eugene Agapov, Thomas E. Phillips, Maria E. Fuentes, Antonio Iglesias, Dee Aud, John D. Allard, Karim Dabbagh, Gary Peltz, Michael J. Holtzman

Physiol Genomics. Author manuscript; available in PMC 2019 Feb 7.

Published in final edited form as: Physiol Genomics. 2006 May 16; 25(3): 502–513. Published online 2006 Mar 28. doi: 10.1152/physiolgenomics.00321.2005

PMCID:: PMC6366330

Abstract Article PDF–2.7M

Select item 58627714.

A CRISPR-based screen for Hedgehog signaling provides insights into ciliary function and ciliopathies

David K. Breslow, Sascha Hoogendoorn, Adam R. Kopp, David W. Morgens, Brandon K. Vu, Margaret C. Kennedy, Kyuho Han, Amy Li, Gaelen T. Hess, Michael C. Bassik, James K. Chen, Maxence V. Nachury

Nat Genet. Author manuscript; available in PMC 2018 Aug 19.

Published in final edited form as: Nat Genet. 2018 Mar; 50(3): 460–471. Published online 2018 Feb 19. doi: 10.1038/s41588-018-0054-7

PMCID:: PMC5862771

Abstract Article PDF–2.5M

Select item 48725985.

TRPC1 regulates calcium‐activated chloride channels in salivary gland cells

Yuyang Sun, Lutz Birnbaumer, Brij B. Singh

J Cell Physiol. 2015 Nov; 230(11): 2848–2856. Published online 2015 Jul 27. doi: 10.1002/jcp.25017

PMCID:: PMC4872598

Abstract Article PDF–1.5M

Select item 43195596.

A high resolution spatiotemporal atlas of gene expression of the developing mouse brain

Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones

Neuron. Author manuscript; available in PMC 2015 Jul 16.

Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033

PMCID:: PMC4319559

Abstract Article PDF–3.0M

Select item 40802797.

Transcriptional profiling reveals ductus arteriosus-specific genes that regulate vascular tone

Elaine L. Shelton, Gerren Ector, Cristi L. Galindo, Christopher W. Hooper, Naoko Brown, Irene Wilkerson, Elise R. Pfaltzgraff, Bibhash C. Paria, Robert B. Cotton, Jason Z. Stoller, Jeff Reese

Physiol Genomics. 2014 Jul 1; 46(13): 457–466. Published online 2014 May 1. doi: 10.1152/physiolgenomics.00171.2013

PMCID:: PMC4080279

Abstract Article

Select item 35724108.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 34231109.

Differential effects of extracellular ATP on chloride transport in cortical collecting duct cells

Madhumitha Rajagopal, Paru P. Kathpalia, Jonathan H. Widdicombe, Alan C. Pao

Am J Physiol Renal Physiol. 2012 Aug 15; 303(4): F483–F491. Published online 2012 May 30. doi: 10.1152/ajprenal.00062.2012

PMCID:: PMC3423110

Abstract Article

Select item 336750510.

Lymphatic endothelial mCLCA1 is a ligand for leukocyte LFA-1 and Mac-1

Momoko Furuya, Sara B. Kirschbaum, Amanda Paulovich, Bendicht U. Pauli, Heidi Zhang, Jonathan S. Alexander, Andrew G. Farr, Alanna Ruddell

J Immunol. Author manuscript; available in PMC 2012 Jun 5.

Published in final edited form as: J Immunol. 2010 Nov 15; 185(10): 5769–5777. Published online 2010 Oct 11. doi: 10.4049/jimmunol.1002226

PMCID:: PMC3367505

Abstract Article PDF–2.0M

Select item 317805911.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 302253412.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 288940613.

Cellular Distribution and Subcellular Localization of mCLCA1/2 in Murine Gastrointestinal Epithelia

Eleni Roussa, Petra Wittschen, Natascha A. Wolff, Blazej Torchalski, Achim D. Gruber, Frank Thévenod

J Histochem Cytochem. 2010 Jul; 58(7): 653–668. doi: 10.1369/jhc.2010.955211

PMCID:: PMC2889406

Abstract Article PDF–3.0M

Select item 265347414.

Expression analysis of the CLCA gene family in mouse and human with emphasis on the nervous system

Marko Piirsoo, Dies Meijer, Tõnis Timmusk

BMC Dev Biol. 2009; 9: 10. Published online 2009 Feb 11. doi: 10.1186/1471-213X-9-10

PMCID:: PMC2653474

Abstract Article PDF–6.1M

Select item 169372015.

Klf4 and corticosteroids activate an overlapping set of transcriptional targets to accelerate in utero epidermal barrier acquisition

Satyakam Patel, Zong Fang Xi, Eun Young Seo, David McGaughey, Julia A. Segre

Proc Natl Acad Sci U S A. 2006 Dec 5; 103(49): 18668–18673. Published online 2006 Nov 27. doi: 10.1073/pnas.0608658103

PMCID:: PMC1693720

Abstract Article PDF–918K

Select item 31099216.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098017.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924118.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 1683319.

Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray

Tetsuya S. Tanaka, Saied A. Jaradat, Meng K. Lim, George J. Kargul, Xiaohong Wang, Marija J. Grahovac, Serafino Pantano, Yuri Sano, Yulan Piao, Ramaiah Nagaraja, Hirofumi Doi, William H. Wood, III, Kevin G. Becker, Minoru S. H. Ko

Proc Natl Acad Sci U S A. 2000 Aug 1; 97(16): 9127–9132. doi: 10.1073/pnas.97.16.9127

PMCID:: PMC16833

Abstract Article PDF–847K

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