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Select item 66023001.

New roles for the de-ubiquitylating enzyme OTUD4 in an RNA–protein network and RNA granules

Richa Das, Lukas Schwintzer, Stanislav Vinopal, Eva Aguado Roca, Marc Sylvester, Ana-Maria Oprisoreanu, Susanne Schoch, Frank Bradke, Meike Broemer

J Cell Sci. 2019 Jun 15; 132(12): jcs229252. Published online 2019 Jun 17. doi: 10.1242/jcs.229252

PMCID:: PMC6602300

Abstract Article

Select item 65241702.

The PAF1c Subunit CDC73 Is Required for Mouse Hematopoietic Stem Cell Maintenance but Displays Leukemia-Specific Gene Regulation

Nirmalya Saha, James Ropa, Lili Chen, Hsiangyu Hu, Maria Mysliwski, Ann Friedman, Ivan Maillard, Andrew G. Muntean

Stem Cell Reports. 2019 May 14; 12(5): 1069–1083. Published online 2019 Apr 25. doi: 10.1016/j.stemcr.2019.03.010

PMCID:: PMC6524170

Abstract Article PDF–4.3M

Select item 56450823.

Spatio-temporal profile of postynaptic interactomes integrates components of complex brain disorders

Jing Li, Wangshu Zhang, Hui Yang, Daniel P. Howrigan, Brent Wilkinson, Tade Souaiaia, Oleg V. Evgrafov, Giulio Genovese, Veronica A. Clementel, Jennifer C. Tudor, Ted Abel, James A. Knowles, Benjamin M. Neale, Kai Wang, Fengzhu Sun, Marcelo P. Coba

Nat Neurosci. Author manuscript; available in PMC 2018 Aug 1.

Published in final edited form as: Nat Neurosci. 2017 Aug; 20(8): 1150–1161. Published online 2017 Jun 26. doi: 10.1038/nn.4594

PMCID:: PMC5645082

Abstract Article PDF–2.3M

Select item 54722004.

Mice deleted for cell division cycle 73 gene develop parathyroid and uterine tumours: model for the hyperparathyroidism-jaw tumour syndrome

G V Walls, M Stevenson, K E Lines, P J Newey, A A C Reed, M R Bowl, J Jeyabalan, B Harding, K J Bradley, S Manek, J Chen, P Wang, B O Williams, B T Teh, R V Thakker

Oncogene. 2017 Jul 13; 36(28): 4025–4036. Published online 2017 Mar 13. doi: 10.1038/onc.2017.43

PMCID:: PMC5472200

Abstract Article PDF–3.5M

Select item 52010315.

Setd5 is essential for mammalian development and the co-transcriptional regulation of histone acetylation

Anna B. Osipovich, Rama Gangula, Pedro G. Vianna, Mark A. Magnuson

Development. 2016 Dec 15; 143(24): 4595–4607. doi: 10.1242/dev.141465

PMCID:: PMC5201031

Abstract Article

Select item 50831326.

Regulation of transcriptional elongation in pluripotency and cell differentiation by the PHD-finger protein Phf5a

Alexandros Strikoudis, Charalampos Lazaris, Thomas Trimarchi, Antonio L. Galvao Neto, Yan Yang, Panagiotis Ntziachristos, Scott Rothbart, Shannon Buckley, Igor Dolgalev, Matthias Stadtfeld, Brian D. Strahl, Brian D. Dynlacht, Aristotelis Tsirigos, Iannis Aifantis

Nat Cell Biol. Author manuscript; available in PMC 2017 Apr 17.

Published in final edited form as: Nat Cell Biol. 2016 Nov; 18(11): 1127–1138. Published online 2016 Oct 17. doi: 10.1038/ncb3424

PMCID:: PMC5083132

Abstract Article PDF–2.8M

Select item 37724987.

MLL fusion protein–driven AML is selectively inhibited by targeted disruption of the MLL-PAFc interaction

Andrew G. Muntean, Wei Chen, Morgan Jones, Eric M. Granowicz, Ivan Maillard, Jay L. Hess

Blood. 2013 Sep 12; 122(11): 1914–1922. Prepublished online 2013 Jul 30. doi: 10.1182/blood-2013-02-486977

PMCID:: PMC3772498

Abstract Article

Select item 36942818.

The X-linked Intellectual Disability Protein PHF6 Associates with the PAF1 Complex and Regulates Neuronal Migration in the Mammalian Brain

Chi Zhang, Luis A. Mejia, Ju Huang, Pamela Valnegri, Eric J. Bennett, Julius Anckar, Arezu Jahani-Asl, Gilbert Gallardo, Yoshiho Ikeuchi, Tomoko Yamada, Michael Rudnicki, J. Wade Harper, Azad Bonni

Neuron. Author manuscript; available in PMC 2014 Jun 19.

Published in final edited form as: Neuron. 2013 Jun 19; 78(6): 986–993. doi: 10.1016/j.neuron.2013.04.021

PMCID:: PMC3694281

Abstract Article PDF–4.3M

Select item 35724109.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 353705910.

Oncogenic MicroRNA-155 Down-regulates Tumor Suppressor CDC73 and Promotes Oral Squamous Cell Carcinoma Cell Proliferation: IMPLICATIONS FOR CANCER THERAPEUTICS

Mohammad Iqbal Rather, Mathighatta N. Nagashri, Shivananda S. Swamy, Kodaganur S. Gopinath, Arun Kumar

J Biol Chem. 2013 Jan 4; 288(1): 608–618. Published online 2012 Nov 19. doi: 10.1074/jbc.M112.425736

PMCID:: PMC3537059

Abstract Article PDF–2.6M

Select item 329501611.

Dynamic Loss of H2B Ubiquitylation without Corresponding Changes in H3K4 Trimethylation during Myogenic Differentiation

Vasupradha Vethantham, Yan Yang, Christopher Bowman, Patrik Asp, Jeong-Heon Lee, David G. Skalnik, Brian D. Dynlacht

Mol Cell Biol. 2012 Mar; 32(6): 1044–1055. doi: 10.1128/MCB.06026-11

PMCID:: PMC3295016

Abstract Article PDF–2.3M

Select item 325246512.

Oct4 links multiple epigenetic pathways to the pluripotency network

Junjun Ding, Huilei Xu, Francesco Faiola, Avi Ma'ayan, Jianlong Wang

Cell Res. 2012 Jan; 22(1): 155–167. Published online 2011 Nov 15. doi: 10.1038/cr.2011.179

PMCID:: PMC3252465

Abstract Article PDF–2.7M

Select item 317805913.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 309339514.

RAD21 Cooperates with Pluripotency Transcription Factors in the Maintenance of Embryonic Stem Cell Identity

Anja Nitzsche, Maciej Paszkowski-Rogacz, Filomena Matarese, Eva M. Janssen-Megens, Nina C. Hubner, Herbert Schulz, Ingrid de Vries, Li Ding, Norbert Huebner, Matthias Mann, Hendrik G. Stunnenberg, Frank Buchholz

PLoS One. 2011; 6(5): e19470. Published online 2011 May 12. doi: 10.1371/journal.pone.0019470

PMCID:: PMC3093395

Abstract Article PDF–1.0M

Select item 255627015.

Large-scale gene trapping in C57BL/6N mouse embryonic stem cells

Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin

Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108

PMCID:: PMC2556270

Abstract Article PDF–493K

Select item 229308816.

Parafibromin, a Component of the Human PAF Complex, Regulates Growth Factors and Is Required for Embryonic Development and Survival in Adult Mice

Pengfei Wang, Michael R. Bowl, Stephanie Bender, Jun Peng, Leslie Farber, Jindong Chen, Asif Ali, ZhongFa Zhang, Arthur S. Alberts, Rajesh V. Thakker, Ali Shilatifard, Bart O. Williams, Bin Tean Teh

Mol Cell Biol. 2008 May; 28(9): 2930–2940. Published online 2008 Jan 22. doi: 10.1128/MCB.00654-07

PMCID:: PMC2293088

Abstract Article PDF–1.0M

Select item 141356817.

BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System

Susan Magdaleno, Patricia Jensen, Craig L Brumwell, Anna Seal, Karen Lehman, Andrew Asbury, Tony Cheung, Tommie Cornelius, Diana M Batten, Christopher Eden, Shannon M Norland, Dennis S Rice, Nilesh Dosooye, Sundeep Shakya, Perdeep Mehta, Tom Curran

PLoS Biol. 2006 Apr; 4(4): e86. Published online 2006 Mar 28. doi: 10.1371/journal.pbio.0040086

PMCID:: PMC1413568

Article PDF–99K

Select item 55297118.

Tagging genes with cassette-exchange sites

Gilda Cobellis, Giancarlo Nicolaus, Mariangela Iovino, Antonio Romito, Emanuele Marra, Manlio Barbarisi, Marco Sardiello, Francesco P. Di Giorgio, Nicola Iovino, Massimo Zollo, Andrea Ballabio, Riccardo Cortese

Nucleic Acids Res. 2005; 33(4): e44. Published online 2005 Mar 1. doi: 10.1093/nar/gni045

PMCID:: PMC552971

Abstract Article PDF–382K

Select item 52892819.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 31099220.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

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