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Select item 98519731.

A comprehensive SARS-CoV-2–human protein–protein interactome reveals COVID-19 pathobiology and potential host therapeutic targets

Yadi Zhou, Yuan Liu, Shagun Gupta, Mauricio I. Paramo, Yuan Hou, Chengsheng Mao, Yuan Luo, Julius Judd, Shayne Wierbowski, Marta Bertolotti, Mriganka Nerkar, Lara Jehi, Nir Drayman, Vlad Nicolaescu, Haley Gula, Savaş Tay, Glenn Randall, Peihui Wang, John T. Lis, Cédric Feschotte, Serpil C. Erzurum, Feixiong Cheng, Haiyuan Yu

Nat Biotechnol. Author manuscript; available in PMC 2023 Jan 20.

Published in final edited form as: Nat Biotechnol. 2023 Jan; 41(1): 128–139. Published online 2022 Oct 10. doi: 10.1038/s41587-022-01474-0

PMCID:: PMC9851973

Abstract Article PDF–4.0M

Select item 94790402.

Lysophosphatidylcholine 16:0 mediates chronic joint pain associated to rheumatic diseases through acid-sensing ion channel 3

Florian Jacquot, Spiro Khoury, Bonnie Labrum, Kévin Delanoe, Ludivine Pidoux, Julie Barbier, Lauriane Delay, Agathe Bayle, Youssef Aissouni, David A. Barriere, Kim Kultima, Eva Freyhult, Anders Hugo, Eva Kosek, Aisha S. Ahmed, Alexandra Jurczak, Eric Lingueglia, Camilla I. Svensson, Véronique Breuil, Thierry Ferreira, Fabien Marchand, Emmanuel Deval

Pain. 2022 Oct; 163(10): 1999–2013. Published online 2022 Jan 27. doi: 10.1097/j.pain.0000000000002596

PMCID:: PMC9479040

Abstract Article PDF–1.6M

Select item 87159813.

Upregulation of acid sensing ion channels is associated with esophageal hypersensitivity in GERD

Xu Han, Yawen Zhang, Allen Lee, Zhaoshen Li, Jun Gao, Xiaoyin Wu, Jiulong Zhao, Hui Wang, Di Chen, Duowu Zou, Chung Owyang

FASEB J. 2022 Jan; 36(1): e22083. Published online 2021 Dec 17. doi: 10.1096/fj.202100606R

PMCID:: PMC8715981

Abstract Article PDF–1.6M

Select item 82360784.

Comparative Host Interactomes of the SARS-CoV-2 Nonstructural Protein 3 and Human Coronavirus Homologs

Katherine M. Almasy, Jonathan P. Davies, Lars Plate

Mol Cell Proteomics. 2021; 20: 100120. Published online 2021 Jun 27. doi: 10.1016/j.mcpro.2021.100120

PMCID:: PMC8236078

Abstract Article PDF–4.6M

Select item 81650305.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 81260516.

TRPV1 Responses in the Cerebellum Lobules VI, VII, VIII Using Electroacupuncture Treatment for Chronic Pain and Depression Comorbidity in a Murine Model

Bernice Lottering, Yi-Wen Lin

Int J Mol Sci. 2021 May; 22(9): 5028. Published online 2021 May 10. doi: 10.3390/ijms22095028

PMCID:: PMC8126051

Abstract Article PDF–3.7M

Select item 80642237.

ASIC1 and ASIC3 mediate cellular senescence of human nucleus pulposus mesenchymal stem cells during intervertebral disc degeneration

Jingyu Ding, Renjie Zhang, Huimin Li, Qiang Ji, Xiaomin Cheng, Rick Francis Thorne, Hubert Hondermarck, Xiaoying Liu, Cailiang Shen

Aging (Albany NY) 2021 Apr 15; 13(7): 10703–10723. Published online 2021 Apr 6. doi: 10.18632/aging.202850

PMCID:: PMC8064223

Abstract Article PDF–2.0M

Select item 80552718.

Augmenter of liver regeneration regulates cellular iron homeostasis by modulating mitochondrial transport of ATP-binding cassette B8

Hsiang-Chun Chang, Jason Solomon Shapiro, Xinghang Jiang, Grant Senyei, Teruki Sato, Justin Geier, Konrad T Sawicki, Hossein Ardehali

eLife. 2021; 10: e65158. Published online 2021 Apr 9. doi: 10.7554/eLife.65158

PMCID:: PMC8055271

Abstract Article PDF–2.8M

Select item 67302149.

Acid-Induced Pain and Its Modulation in Humans

Nicholas G. Jones, Rebeccah Slater, Herve Cadiou, Peter McNaughton, Stephen B. McMahon

J Neurosci. 2004 Dec 1; 24(48): 10974–10979. doi: 10.1523/JNEUROSCI.2619-04.2004

PMCID:: PMC6730214

Abstract Article PDF–232K

Select item 672648510.

Identification of an ATP-sensitive potassium channel in mitochondria

Angela Paggio, Vanessa Checchetto, Antonio Campo, Roberta Menabò, Giulia Di Marco, Fabio Di Lisa, Ildiko Szabo, Rosario Rizzuto, Diego De Stefani

Nature. Author manuscript; available in PMC 2020 Feb 21.

Published in final edited form as: Nature. 2019 Aug 1; 572(7771): 609–613. Published online 2019 Aug 21. doi: 10.1038/s41586-019-1498-3

PMCID:: PMC6726485

Abstract Article PDF–5.3M

Select item 570387811.

The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery

Ramesh Kumar, Román González-Prieto, Zhenyu Xiao, Matty Verlaan-de Vries, Alfred C. O. Vertegaal

Nat Commun. 2017; 8: 1809. Published online 2017 Nov 27. doi: 10.1038/s41467-017-01900-x

PMCID:: PMC5703878

Abstract Article PDF–3.7M

Select item 553161112.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 552071013.

ASIC1 and ASIC3 contribute to acidity-induced EMT of pancreatic cancer through activating Ca²⁺/RhoA pathway

Shuai Zhu, Hai-Yun Zhou, Shi-Chang Deng, Shi-Jiang Deng, Chi He, Xiang Li, Jing-Yuan Chen, Yan Jin, Zhuang-Li Hu, Fang Wang, Chun-You Wang, Gang Zhao

Cell Death Dis. 2017 May; 8(5): e2806. Published online 2017 May 18. doi: 10.1038/cddis.2017.189

PMCID:: PMC5520710

Abstract Article PDF–7.0M

Select item 530241614.

Respiratory virus infection up-regulates TRPV1, TRPA1 and ASICS3 receptors on airway cells

Shadia Omar, Rebecca Clarke, Haniah Abdullah, Clare Brady, John Corry, Hanagh Winter, Olivier Touzelet, Ultan F. Power, Fionnuala Lundy, Lorcan P. A. McGarvey, S. Louise Cosby

PLoS One. 2017; 12(2): e0171681. Published online 2017 Feb 10. doi: 10.1371/journal.pone.0171681

PMCID:: PMC5302416

Abstract Article PDF–2.7M

Select item 511259115.

Acidic pH promotes intervertebral disc degeneration: Acid-sensing ion channel -3 as a potential therapeutic target

Hamish T. J. Gilbert, Nathan Hodson, Pauline Baird, Stephen M. Richardson, Judith A. Hoyland

Sci Rep. 2016; 6: 37360. Published online 2016 Nov 17. doi: 10.1038/srep37360

PMCID:: PMC5112591

Abstract Article PDF–1.5M

Select item 482661416.

?F508 CFTR interactome remodeling promotes rescue of Cystic Fibrosis

Sandra Pankow, Casimir Bamberger, Diego Calzolari, Salvador Martínez-Bartolomé, Mathieu Lavallée-Adam, William E. Balch, John R. Yates, III

Nature. Author manuscript; available in PMC 2016 May 30.

Published in final edited form as: Nature. 2015 Dec 24; 528(7583): 510–516. Published online 2015 Nov 30. doi: 10.1038/nature15729

PMCID:: PMC4826614

Abstract Article PDF–5.7M

Select item 475511517.

Non‐acidic activation of pain‐related Acid‐Sensing Ion Channel 3 by lipids

Sébastien Marra, Romain Ferru‐Clément, Véronique Breuil, Anne Delaunay, Marine Christin, Valérie Friend, Stéphane Sebille, Christian Cognard, Thierry Ferreira, Christian Roux, Liana Euller‐Ziegler, Jacques Noel, Eric Lingueglia, Emmanuel Deval

EMBO J. 2016 Feb 15; 35(4): 414–428. Published online 2016 Jan 15. doi: 10.15252/embj.201592335

PMCID:: PMC4755115

Abstract Article PDF–805K

Select item 461721118.

The BioPlex Network: A Systematic Exploration of the Human Interactome

Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2016 Jul 16.

Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043

PMCID:: PMC4617211

Abstract Article PDF–2.2M

Select item 374348419.

Sea Anemone Peptide with Uncommon β-Hairpin Structure Inhibits Acid-sensing Ion Channel 3 (ASIC3) and Reveals Analgesic Activity

Dmitry I. Osmakov, Sergey A. Kozlov, Yaroslav A. Andreev, Sergey G. Koshelev, Nadezhda P. Sanamyan, Karen E. Sanamyan, Igor A. Dyachenko, Dmitry A. Bondarenko, Arkadii N. Murashev, Konstantin S. Mineev, Alexander S. Arseniev, Eugene V. Grishin

J Biol Chem. 2013 Aug 9; 288(32): 23116–23127. Published online 2013 Jun 25. doi: 10.1074/jbc.M113.485516

PMCID:: PMC3743484

Abstract Article PDF–2.3M

Select item 347780420.

A Census of Human Soluble Protein Complexes

Pierre C. Havugimana, G. Traver Hart, Tamás Nepusz, Haixuan Yang, Andrei L. Turinsky, Zhihua Li, Peggy I. Wang, Daniel R. Boutz, Vincent Fong, Sadhna Phanse, Mohan Babu, Stephanie A. Craig, Pingzhao Hu, Cuihong Wan, James Vlasblom, Vaqaarun-Nisa Dar, Alexander Bezginov, Gregory W. Clark, Gabriel C. Wu, Shoshana J. Wodak, Elisabeth R.M. Tillier, Alberto Paccanaro, Edward M. Marcotte, Andrew Emili

Cell. Author manuscript; available in PMC 2013 Aug 31.

Published in final edited form as: Cell. 2012 Aug 31; 150(5): 1068–1081. doi: 10.1016/j.cell.2012.08.011

PMCID:: PMC3477804

Abstract Article PDF–7.7M

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