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Items: 13

1.
Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations
Robert Fragoza, Jishnu Das, Shayne D. Wierbowski, Jin Liang, Tina N. Tran, Siqi Liang, Juan F. Beltran, Christen A. Rivera-Erick, Kaixiong Ye, Ting-Yi Wang, Li Yao, Matthew Mort, Peter D. Stenson, David N. Cooper, Xiaomu Wei, Alon Keinan, John C. Schimenti, Andrew G. Clark, Haiyuan Yu
Nat Commun. 2019; 10: 4141. Published online 2019 Sep 12. doi: 10.1038/s41467-019-11959-3
PMCID:
PMC6742646
AbstractArticlePDF–1.2M
2.
Cloning, localization and focus formation at DNA damage sites of canine XRCC4
Manabu KOIKE, Yasutomo YUTOKU, Aki KOIKE
J Vet Med Sci. 2016 Dec; 78(12): 1865–1871. Published online 2016 Sep 18. doi: 10.1292/jvms.16-0381
PMCID:
PMC5240766
AbstractArticlePDF–2.1M
3.
XLS (c9orf142) is a new component of mammalian DNA double-stranded break repair
A Craxton, J Somers, D Munnur, R Jukes-Jones, K Cain, M Malewicz
Cell Death Differ. 2015 Jun; 22(6): 890–897. Published online 2015 Mar 13. doi: 10.1038/cdd.2015.22
PMCID:
PMC4423191
AbstractArticlePDF–1.9M
4.
A proteome-scale map of the human interactome network
Thomas Rolland, Murat Taşan, Benoit Charloteaux, Samuel J. Pevzner, Quan Zhong, Nidhi Sahni, Song Yi, Irma Lemmens, Celia Fontanillo, Roberto Mosca, Atanas Kamburov, Susan D. Ghiassian, Xinping Yang, Lila Ghamsari, Dawit Balcha, Bridget E. Begg, Pascal Braun, Marc Brehme, Martin P. Broly, Anne-Ruxandra Carvunis, Dan Convery-Zupan, Roser Corominas, Jasmin Coulombe-Huntington, Elizabeth Dann, Matija Dreze, Amélie Dricot, Changyu Fan, Eric Franzosa, Fana Gebreab, Bryan J. Gutierrez, Madeleine F. Hardy, Mike Jin, Shuli Kang, Ruth Kiros, Guan Ning Lin, Katja Luck, Andrew MacWilliams, Jörg Menche, Ryan R. Murray, Alexandre Palagi, Matthew M. Poulin, Xavier Rambout, John Rasla, Patrick Reichert, Viviana Romero, Elien Ruyssinck, Julie M. Sahalie, Annemarie Scholz, Akash A. Shah, Amitabh Sharma, Yun Shen, Kerstin Spirohn, Stanley Tam, Alexander O. Tejeda, Shelly A. Wanamaker, Jean-Claude Twizere, Kerwin Vega, Jennifer Walsh, Michael E. Cusick, Yu Xia, Albert-László Barabási, Lilia M. Iakoucheva, Patrick Aloy, Javier De Las Rivas, Jan Tavernier, Michael A. Calderwood, David E. Hill, Tong Hao, Frederick P. Roth, Marc Vidal
Cell. Author manuscript; available in PMC 2015 Nov 20.
Published in final edited form as: Cell. 2014 Nov 20; 159(5): 1212–1226. doi: 10.1016/j.cell.2014.10.050
PMCID:
PMC4266588
AbstractArticlePDF–3.1M
5.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
6.
Structural characterization of filaments formed by human Xrcc4–Cernunnos/XLF complex involved in nonhomologous DNA end-joining
Virginie Ropars, Pascal Drevet, Pierre Legrand, Sonia Baconnais, Jeremy Amram, Guilhem Faure, José A. Márquez, Olivier Piétrement, Raphaël Guerois, Isabelle Callebaut, Eric Le Cam, Patrick Revy, Jean-Pierre de Villartay, Jean-Baptiste Charbonnier
Proc Natl Acad Sci U S A. 2011 Aug 2; 108(31): 12663-12668. Published online 2011 Jul 18. doi: 10.1073/pnas.1100758108
PMCID:
PMC3150875
AbstractArticlePDF–1.3M
7.
The Mechanism of Double-Strand DNA Break Repair by the Nonhomologous DNA End Joining Pathway
Michael R. Lieber
Annu Rev Biochem. Author manuscript; available in PMC 2011 Apr 19.
Published in final edited form as: Annu Rev Biochem. 2010; 79: 181–211. doi: 10.1146/annurev.biochem.052308.093131
PMCID:
PMC3079308
AbstractArticlePDF–754K
8.
XLF regulates filament architecture of the XRCC4·Ligase IV complex
Michal Hammel, Yaping Yu, Shujuan Fang, Susan P. Lees-Miller, John A. Tainer
Structure. Author manuscript; available in PMC 2011 Nov 10.
Published in final edited form as: Structure. 2010 Nov 10; 18(11): 1431–1442. doi: 10.1016/j.str.2010.09.009
PMCID:
PMC3008546
AbstractArticlePDF–2.2M
9.
Ku is a 5'dRP/AP lyase that excises nucleotide damage near broken ends
Steven A. Roberts, Natasha Strande, Martin D. Burkhalter, Christina Strom, Jody M. Havener, Paul Hasty, Dale A. Ramsden
Nature. Author manuscript; available in PMC 2010 Oct 22.
Published in final edited form as: Nature. 2010 Apr 22; 464(7292): 1214–1217. Published online 2010 Apr 11. doi: 10.1038/nature08926
PMCID:
PMC2859099
AbstractArticlePDF–407K
10.
Ku DNA end-binding protein modulates homologous repair of double-strand breaks in mammalian cells
Andrew J. Pierce, Peng Hu, Mingguang Han, Nathan Ellis, Maria Jasin
Genes Dev. 2001 Dec 15; 15(24): 3237–3242. doi: 10.1101/gad.946401
PMCID:
PMC312854
AbstractArticlePDF–163K
11.
In Vitro and In Vivo Interactions of DNA Ligase IV with a Subunit of the Condensin Complex
Marcin R. Przewloka, Paige E. Pardington, Steven M. Yannone, David J. Chen, Robert B. Cary
Mol Biol Cell. 2003 Feb; 14(2): 685–697. doi: 10.1091/mbc.E01-11-0117
PMCID:
PMC150001
AbstractArticlePDF–737K
12.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K
13.
Defective embryonic neurogenesis in Ku-deficient but not DNA-dependent protein kinase catalytic subunit-deficient mice
Yansong Gu, JoAnn Sekiguchi, Yijie Gao, Pieter Dikkes, Karen Frank, David Ferguson, Paul Hasty, Jerold Chun, Frederick W. Alt
Proc Natl Acad Sci U S A. 2000 Mar 14; 97(6): 2668–2673. doi: 10.1073/pnas.97.6.2668
PMCID:
PMC15987
AbstractArticlePDF–691K

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