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Items: 17

1.
Acetylation-Mimic Mutation of TRIM28-Lys304 to Gln Attenuates the Interaction with KRAB-Zinc-Finger Proteins and Affects Gene Expression in Leukemic K562 Cells
Yao-Jen Chang, Steven Lin, Zhi-Fu Kang, Bin-Jon Shen, Wen-Hai Tsai, Wen-Ching Chen, Hsin-Pin Lu, Yu-Lun Su, Shu-Jen Chou, Shu-Yu Lin, Sheng-Wei Lin, Yin-Jung Huang, Hsin-Hui Wang, Ching-Jin Chang
Int J Mol Sci. 2023 Jun; 24(12): 9830. Published online 2023 Jun 6. doi: 10.3390/ijms24129830
PMCID:
PMC10298087
AbstractArticlePDF–4.3M
2.
Structure and functional mapping of the KRAB‐KAP1 repressor complex
Guido A Stoll, Ninoslav Pandiloski, Christopher H Douse, Yorgo Modis
EMBO J. 2022 Dec; 41(24): e111179. Published online 2022 Nov 7. doi: 10.15252/embj.2022111179
PMCID:
PMC9753469
AbstractArticlePDF–17M
3.
ARHGAP24 represses β-catenin transactivation-induced invasiveness in hepatocellular carcinoma mainly by acting as a GTPase-independent scaffold
Wenjing Yang, Beili Wang, Qian Yu, Te Liu, Tong Li, Tongtong Tian, Anli Jin, Lin Ding, Wei Chen, Hao Wang, Jingrong Xian, Baishen Pan, Jian Zhou, Jia Fan, Xinrong Yang, Wei Guo
Theranostics. 2022; 12(14): 6189–6206. Published online 2022 Aug 21. doi: 10.7150/thno.72134
PMCID:
PMC9475462
AbstractArticlePDF–4.6M
4.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
5.
Structure of KAP1 tripartite motif identifies molecular interfaces required for retroelement silencing
Guido A. Stoll, Shun-ichiro Oda, Zheng-Shan Chong, Minmin Yu, Stephen H. McLaughlin, Yorgo Modis
Proc Natl Acad Sci U S A. 2019 Jul 23; 116(30): 15042–15051. Published online 2019 Jul 9. doi: 10.1073/pnas.1901318116
PMCID:
PMC6660772
AbstractArticlePDF–2.3M
6.
Interactome and proteome dynamics uncover immune modulatory associations of the pathogen sensing factor cGAS
Krystal K. Lum, Bokai Song, Joel D. Federspiel, Benjamin A. Diner, Timothy Howard, Ileana M. Cristea
Cell Syst. Author manuscript; available in PMC 2019 Dec 26.
Published in final edited form as: Cell Syst. 2018 Dec 26; 7(6): 627–642.e6. Published online 2018 Nov 21. doi: 10.1016/j.cels.2018.10.010
PMCID:
PMC6310102
AbstractArticlePDF–3.5M
7.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
8.
The BioPlex Network: A Systematic Exploration of the Human Interactome
Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2016 Jul 16.
Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043
PMCID:
PMC4617211
AbstractArticlePDF–2.2M
9.
An evolutionary arms race between KRAB zinc finger genes 91/93 and SVA/L1 retrotransposons
Frank MJ Jacobs, David Greenberg, Ngan Nguyen, Maximilian Haeussler, Adam D Ewing, Sol Katzman, Benedict Paten, Sofie R Salama, David Haussler
Nature. Author manuscript; available in PMC 2015 Jun 11.
Published in final edited form as: Nature. 2014 Dec 11; 516(7530): 242–245. Published online 2014 Sep 28. doi: 10.1038/nature13760
PMCID:
PMC4268317
AbstractArticlePDF–3.4M
10.
A whole genome screen for HIV restriction factors
Li Liu, Nidia MM Oliveira, Kelly M Cheney, Corinna Pade, Hanna Dreja, Ann-Marie H Bergin, Viola Borgdorff, David H Beach, Cleo L Bishop, Matthias T Dittmar, Áine McKnight
Retrovirology. 2011; 8: 94. Published online 2011 Nov 14. doi: 10.1186/1742-4690-8-94
PMCID:
PMC3228845
AbstractArticlePDF–640K
11.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
12.
Personalized Smoking Cessation: Interactions between Nicotine Dose, Dependence and Quit-Success Genotype Score
Jed E Rose, Frédérique M Behm, Tomas Drgon, Catherine Johnson, George R Uhl
Mol Med. 2010 Jul-Aug; 16(7-8): 247–253. Published online 2010 Mar 17. doi: 10.2119/molmed.2009.00159
Correction in:
Mol Med. 2012; 18(1): 729.
PMCID:
PMC2896464
AbstractArticlePDF–2.4M
13.
ZNF93 Increases Resistance to ET-743 (Trabectedin; Yondelis®) and PM00104 (Zalypsis®) in Human Cancer Cell Lines
Zhenfeng Duan, Edwin Choy, David Harmon, Cao Yang, Keinosuke Ryu, Joseph Schwab, Henry Mankin, Francis J. Hornicek
PLoS One. 2009; 4(9): e6967. Published online 2009 Sep 9. doi: 10.1371/journal.pone.0006967
PMCID:
PMC2734182
AbstractArticlePDF–556K
14.
Genome-Wide and Candidate Gene Association Study of Cigarette Smoking Behaviors
Neil Caporaso, Fangyi Gu, Nilanjan Chatterjee, Jin Sheng-Chih, Kai Yu, Meredith Yeager, Constance Chen, Kevin Jacobs, William Wheeler, Maria Teresa Landi, Regina G. Ziegler, David J. Hunter, Stephen Chanock, Susan Hankinson, Peter Kraft, Andrew W. Bergen
PLoS One. 2009; 4(2): e4653. Published online 2009 Feb 27. doi: 10.1371/journal.pone.0004653
PMCID:
PMC2644817
AbstractArticlePDF–739K
15.
Clustered organization of homologous KRAB zinc-finger genes with enhanced expression in human T lymphoid cells.
E J Bellefroid, J C Marine, T Ried, P J Lecocq, M Rivière, C Amemiya, D A Poncelet, P G Coulie, P de Jong, C Szpirer, et al.
EMBO J. 1993 Apr; 12(4): 1363–1374. doi: 10.1002/j.1460-2075.1993.tb05781.x
PMCID:
PMC413348
SummaryPage BrowsePDF–2.8M
16.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K
17.
The evolutionarily conserved Krüppel-associated box domain defines a subfamily of eukaryotic multifingered proteins.
E J Bellefroid, D A Poncelet, P J Lecocq, O Revelant, J A Martial
Proc Natl Acad Sci U S A. 1991 May 1; 88(9): 3608–3612. doi: 10.1073/pnas.88.9.3608
PMCID:
PMC51501
SummaryPage BrowsePDF–1.7M

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