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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 104429293.

Allotopic expression of COX6 elucidates Atco-driven co-assembly of cytochrome oxidase and ATP synthase

Leticia Veloso R Franco, Chen-Hsien Su, Lorisa Simas Teixeira, Jhulia Almeida Clarck Chagas, Mario Henrique Barros, Alexander Tzagoloff

Life Sci Alliance. 2023 Nov; 6(11): e202301965. Published online 2023 Aug 21. doi: 10.26508/lsa.202301965

PMCID:: PMC10442929

Abstract Article PDF–2.9M

Select item 103298744.

Tolerance to replication stress requires Dun1p kinase and activation of the electron transport chain

Shreya Nagar, Riddhi Mehta, Pritpal Kaur, Roshini T. Liliah, Ales Vancura

Biochim Biophys Acta Mol Cell Res. Author manuscript; available in PMC 2024 Jan 1.

Published in final edited form as: Biochim Biophys Acta Mol Cell Res. 2023 Jan; 1870(1): 119382. Published online 2022 Oct 23. doi: 10.1016/j.bbamcr.2022.119382

PMCID:: PMC10329874

Abstract Article PDF–1.9M

Select item 102977005.

The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions

Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman

Mol Cell. Author manuscript; available in PMC 2024 Jun 15.

Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021

PMCID:: PMC10297700

Abstract Article PDF–2.0M

Select item 99927126.

ATP synthase interactome analysis identifies a new subunit l as a modulator of permeability transition pore in yeast

Chiranjit Panja, Aneta Wiesyk, Katarzyna Niedźwiecka, Emilia Baranowska, Roza Kucharczyk

Sci Rep. 2023; 13: 3839. Published online 2023 Mar 7. doi: 10.1038/s41598-023-30966-5

PMCID:: PMC9992712

Abstract Article PDF–8.1M

Select item 98363487.

A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast

Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger

G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296

PMCID:: PMC9836348

Abstract Article PDF–857K

Select item 92098118.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 88049299.

Oxidative stress protein Oxr1 promotes V‐ATPase holoenzyme disassembly in catalytic activity‐independent manner

Md. Murad Khan, Seowon Lee, Sergio Couoh‐Cardel, Rebecca A Oot, Hyunmin Kim, Stephan Wilkens, Soung‐Hun Roh

EMBO J. 2022 Feb 1; 41(3): e109360. Published online 2021 Dec 17. doi: 10.15252/embj.2021109360

PMCID:: PMC8804929

Abstract Article PDF–5.5M

Select item 722808710.

Atco, a yeast mitochondrial complex of Atp9 and Cox6, is an assembly intermediate of the ATP synthase

Leticia Veloso Ribeiro Franco, Chen-Hsien Su, Julia Burnett, Lorisa Simas Teixeira, Alexander Tzagoloff

PLoS One. 2020; 15(5): e0233177. Published online 2020 May 15. doi: 10.1371/journal.pone.0233177

PMCID:: PMC7228087

Abstract Article PDF–2.9M

Select item 712446611.

Improving Identification of In-organello Protein-Protein Interactions Using an Affinity-enrichable, Isotopically Coded, and Mass Spectrometry-cleavable Chemical Crosslinker

Karl A. T. Makepeace, Yassene Mohammed, Elena L. Rudashevskaya, Evgeniy V. Petrotchenko, F.-Nora Vögtle, Chris Meisinger, Albert Sickmann, Christoph H. Borchers

Mol Cell Proteomics. 2020 Apr; 19(4): 624–639. Published online 2020 Feb 12. doi: 10.1074/mcp.RA119.001839

PMCID:: PMC7124466

Abstract Article PDF–7.8M

Select item 697120612.

Rcf1 Modulates Cytochrome c Oxidase Activity Especially Under Energy-Demanding Conditions

Hannah Dawitz, Jacob Schäfer, Judith M. Schaart, Wout Magits, Peter Brzezinski, Martin Ott

Front Physiol. 2019; 10: 1555. Published online 2020 Jan 14. doi: 10.3389/fphys.2019.01555

PMCID:: PMC6971206

Abstract Article PDF–4.2M

Select item 656127313.

Assembly of the complexes of oxidative phosphorylation triggers the remodeling of cardiolipin

Yang Xu, Murari Anjaneyulu, Alec Donelian, Wenxi Yu, Miriam L. Greenberg, Mindong Ren, Edward Owusu-Ansah, Michael Schlame

Proc Natl Acad Sci U S A. 2019 Jun 4; 116(23): 11235–11240. Published online 2019 May 20. doi: 10.1073/pnas.1900890116

PMCID:: PMC6561273

Abstract Article PDF–1.0M

Select item 633008014.

Structure of yeast cytochrome c oxidase in a supercomplex with cytochrome bc₁

Andrew M. Hartley, Natalya Lukoyanova, Yunyi Zhang, Alfredo Cabrera-Orefice, Susanne Arnold, Brigitte Meunier, Nikos Pinotsis, Amandine Maréchal

Nat Struct Mol Biol. Author manuscript; available in PMC 2019 Jun 30.

Published in final edited form as: Nat Struct Mol Biol. 2019 Jan; 26(1): 78–83. Published online 2018 Dec 31. doi: 10.1038/s41594-018-0172-z

PMCID:: PMC6330080

Abstract Article PDF–2.7M

Select item 628012415.

Recruitment of Cytosolic J-Proteins by TOM Receptors Promotes Mitochondrial Protein Biogenesis

Łukasz Opaliński, Jiyao Song, Chantal Priesnitz, Lena-Sophie Wenz, Silke Oeljeklaus, Bettina Warscheid, Nikolaus Pfanner, Thomas Becker

Cell Rep. 2018 Nov 20; 25(8): 2036–2043.e5. Published online 2018 Nov 20. doi: 10.1016/j.celrep.2018.10.083

PMCID:: PMC6280124

Abstract Article

Select item 621283216.

The Crabtree Effect Shapes the Saccharomyces cerevisiae Lag Phase during the Switch between Different Carbon Sources

Gemma Perez-Samper, Bram Cerulus, Abbas Jariani, Lieselotte Vermeersch, Nuria Barrajón Simancas, Markus M. M. Bisschops, Joost van den Brink, Daniel Solis-Escalante, Brigida Gallone, Dries De Maeyer, Elise van Bael, Tom Wenseleers, Jan Michiels, Kathleen Marchal, Pascale Daran-Lapujade, Kevin J. Verstrepen

mBio. 2018 Sep-Oct; 9(5): e01331-18. Published online 2018 Oct 30. doi: 10.1128/mBio.01331-18

PMCID:: PMC6212832

Abstract Article PDF–3.3M

Select item 621183017.

Transition between fermentation and respiration determines history-dependent behavior in fluctuating carbon sources

Bram Cerulus, Abbas Jariani, Gemma Perez-Samper, Lieselotte Vermeersch, Julian MJ Pietsch, Matthew M Crane, Aaron M New, Brigida Gallone, Miguel Roncoroni, Maria C Dzialo, Sander K Govers, Jhana O Hendrickx, Eva Galle, Maarten Coomans, Pieter Berden, Sara Verbandt, Peter S Swain, Kevin J Verstrepen

eLife. 2018; 7: e39234. Published online 2018 Oct 9. doi: 10.7554/eLife.39234