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Select item 89401771.

Control of spinal motor neuron terminal differentiation through sustained Hoxc8 gene activity

Catarina Catela, Yihan Chen, Yifei Weng, Kailong Wen, Paschalis Kratsios

eLife. 2022; 11: e70766. Published online 2022 Mar 22. doi: 10.7554/eLife.70766

PMCID:: PMC8940177

Abstract Article PDF–6.0M

Select item 81895812.

Hoxa10 mediates positional memory to govern stem cell function in adult skeletal muscle

Kiyoshi Yoshioka, Hiroshi Nagahisa, Fumihito Miura, Hiromitsu Araki, Yasutomi Kamei, Yasuo Kitajima, Daiki Seko, Jumpei Nogami, Yoshifumi Tsuchiya, Narihiro Okazaki, Akihiko Yonekura, Seigo Ohba, Yoshinori Sumita, Ko Chiba, Kosei Ito, Izumi Asahina, Yoshihiro Ogawa, Takashi Ito, Yasuyuki Ohkawa, Yusuke Ono

Sci Adv. 2021 Jun; 7(24): eabd7924. Published online 2021 Jun 9. doi: 10.1126/sciadv.abd7924

PMCID:: PMC8189581

Abstract Article PDF–7.8M

Select item 77046663.

Lysine demethylase 7a regulates murine anterior-posterior development by modulating the transcription of Hox gene cluster

Yoshiki Higashijima, Nao Nagai, Masamichi Yamamoto, Taro Kitazawa, Yumiko K. Kawamura, Akashi Taguchi, Natsuko Nakada, Masaomi Nangaku, Tetsushi Furukawa, Hiroyuki Aburatani, Hiroki Kurihara, Youichiro Wada, Yasuharu Kanki

Commun Biol. 2020; 3: 725. Published online 2020 Nov 30. doi: 10.1038/s42003-020-01456-5

PMCID:: PMC7704666

Abstract Article PDF–1.3M

Select item 72599514.

Lin28a/let-7 pathway modulates the Hox code via Polycomb regulation during axial patterning in vertebrates

Tempei Sato, Kensuke Kataoka, Yoshiaki Ito, Shigetoshi Yokoyama, Masafumi Inui, Masaki Mori, Satoru Takahashi, Keiichi Akita, Shuji Takada, Hiroe Ueno-Kudoh, Hiroshi Asahara

eLife. 2020; 9: e53608. Published online 2020 May 29. doi: 10.7554/eLife.53608

PMCID:: PMC7259951

Abstract Article PDF–5.5M

Select item 64666875.

Abnormal level of CUL4B-mediated histone H2A ubiquitination causes disruptive HOX gene expression

Ye Lin, Juan Yu, Jianxin Wu, Shan Wang, Ting Zhang

Epigenetics Chromatin. 2019; 12: 22. Published online 2019 Apr 16. doi: 10.1186/s13072-019-0268-7

PMCID:: PMC6466687

Abstract Article PDF–3.0M

Select item 53322846.

The cohesin subunit Rad21 is a negative regulator of hematopoietic self-renewal through epigenetic repression of HoxA7 and HoxA9

Joseph B. Fisher, Jonathan Peterson, Michael Reimer, Jr., Cary Stelloh, Kirthi Pulakanti, Zachary J. Gerbec, Alex M. Abel, Jennifer Miksanek Strouse, Christopher Strouse, Maureen McNulty, Subramaniam Malarkannan, John D. Crispino, Samuel Milanovich, Sridhar Rao

Leukemia. Author manuscript; available in PMC 2017 Mar 2.

Published in final edited form as: Leukemia. 2017 Mar; 31(3): 712–719. Published online 2016 Aug 24. doi: 10.1038/leu.2016.240

PMCID:: PMC5332284

Abstract Article PDF–1.5M

Select item 45872867.

Spatiotemporal regulation of GLI target genes in the mammalian limb bud

Jordan P. Lewandowski, Fang Du, Shilu Zhang, Marian B. Powell, Kristin N. Falkenstein, Hongkai Ji, Steven A. Vokes

Dev Biol. Author manuscript; available in PMC 2016 Oct 1.

Published in final edited form as: Dev Biol. 2015 Oct 1; 406(1): 92–103. Published online 2015 Jul 31. doi: 10.1016/j.ydbio.2015.07.022

PMCID:: PMC4587286

Abstract Article PDF–2.0M

Select item 45682858.

Independent regulation of vertebral number and vertebral identity by microRNA-196 paralogs

Siew Fen Lisa Wong, Vikram Agarwal, Jennifer H. Mansfield, Nicolas Denans, Matthew G. Schwartz, Haydn M. Prosser, Olivier Pourquié, David P. Bartel, Clifford J. Tabin, Edwina McGlinn

Proc Natl Acad Sci U S A. 2015 Sep 1; 112(35): E4884–E4893. Published online 2015 Aug 17. doi: 10.1073/pnas.1512655112

PMCID:: PMC4568285

Abstract Article PDF–1.6M

Select item 45081279.

Recruitment of 5′ Hoxa genes in the allantois is essential for proper extra-embryonic function in placental mammals

Martina Scotti, Marie Kmita

Development. Author manuscript; available in PMC 2015 Jul 20.

Published in final edited form as: Development. 2012 Feb; 139(4): 731–739. Published online 2012 Jan 4. doi: 10.1242/dev.075408

PMCID:: PMC4508127

Abstract Article PDF–1.7M

Select item 444565010.

Ribosome mediated specificity in Hox mRNA translation and vertebrate tissue patterning

Nadya Kondrashov, Aya Pusic, Craig R. Stumpf, Kunihiko Shimizu, Andrew C. Hsieh, Junko Ishijima, Toshihiko Shiroishi, Maria Barna

Cell. Author manuscript; available in PMC 2015 May 27.

Published in final edited form as: Cell. 2011 Apr 29; 145(3): 383–397. doi: 10.1016/j.cell.2011.03.028

PMCID:: PMC4445650

Abstract Article PDF–1.5M

Select item 431955911.

A high resolution spatiotemporal atlas of gene expression of the developing mouse brain

Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones

Neuron. Author manuscript; available in PMC 2015 Jul 16.

Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033

PMCID:: PMC4319559

Abstract Article PDF–3.0M

Select item 390795112.

Hoxa9 Regulates Flt3 in Lymphohematopoietic Progenitors

Kimberly Gwin, Elena Frank, Ayoko Bossou, Kay L. Medina

J Immunol. Author manuscript; available in PMC 2014 Jan 31.

Published in final edited form as: J Immunol. 2010 Dec 1; 185(11): 6572–6583. Published online 2010 Oct 22. doi: 10.4049/jimmunol.0904203

PMCID:: PMC3907951

Abstract Article PDF–3.8M

Select item 379774813.

The AERO System: A 3D-Like Approach for Recording Gene Expression Patterns in the Whole Mouse Embryo

Hirohito Shimizu, Atsushi Kubo, Kenta Uchibe, Megumi Hashimoto, Shigetoshi Yokoyama, Shuji Takada, Kazuhiko Mitsuoka, Hiroshi Asahara

PLoS One. 2013; 8(10): e75754. Published online 2013 Oct 16. doi: 10.1371/journal.pone.0075754

PMCID:: PMC3797748

Abstract Article PDF–564K

Select item 372961114.

Non-trisomic Homeobox Gene Expression during Craniofacial Development in the Ts65Dn Mouse Model of Down Syndrome

Cherie N. Billingsley, Jared R. Allen, Douglas D. Baumann, Samantha L. Deitz, Joshua D. Blazek, Abby Newbauer, Andrew Darrah, Brad C. Long, Brandon Young, Mark Clement, R.W. Doerge, Randall J. Roper

Am J Med Genet A. Author manuscript; available in PMC 2014 Aug 1.

Published in final edited form as: Am J Med Genet A. 2013 Aug; 161(8): 1866–1874. Published online 2013 Jul 10. doi: 10.1002/ajmg.a.36006

PMCID:: PMC3729611

Abstract Article PDF–319K

Select item 357241015.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 355452116.

Genetic and Functional Modularity of Hox Activities in the Specification of Limb-Innervating Motor Neurons

Julie Lacombe, Olivia Hanley, Heekyung Jung, Polyxeni Philippidou, Gulsen Surmeli, Jonathan Grinstein, Jeremy S. Dasen

PLoS Genet. 2013 Jan; 9(1): e1003184. Published online 2013 Jan 24. doi: 10.1371/journal.pgen.1003184

PMCID:: PMC3554521

Abstract Article PDF–16M

Select item 337250017.

Reduction of Hox Gene Expression by Histone H1 Depletion

Yunzhe Zhang, Zheng Liu, Magdalena Medrzycki, Kaixiang Cao, Yuhong Fan

PLoS One. 2012; 7(6): e38829. Published online 2012 Jun 11. doi: 10.1371/journal.pone.0038829

PMCID:: PMC3372500

Abstract Article PDF–2.2M

Select item 317805918.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 311015119.

A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58

Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara

Dev Cell. Author manuscript; available in PMC 2011 Jun 7.

Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011

PMCID:: PMC3110151

Abstract Article PDF–2.0M

Select item 309345820.

Down-regulation of homeobox genes MEIS1 and HOXA in MLL-rearranged acute leukemia impairs engraftment and reduces proliferation

Kira Orlovsky, Alexander Kalinkovich, Tanya Rozovskaia, Elias Shezen, Tomer Itkin, Hansjuerg Alder, Hatice Gulcin Ozer, Letizia Carramusa, Abraham Avigdor, Stefano Volinia, Arthur Buchberg, Alex Mazo, Orit Kollet, Corey Largman, Carlo M. Croce, Tatsuya Nakamura, Tsvee Lapidot, Eli Canaani

Proc Natl Acad Sci U S A. 2011 May 10; 108(19): 7956–7961. Published online 2011 Apr 25. doi: 10.1073/pnas.1103154108

PMCID:: PMC3093458

Abstract Article PDF–1.0M

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