PMC Links for GEO Profiles (Select 87608902) - PMC

Debika Ojha, Malgorzata M Jaszczur, Adhirath Sikand, John P McDonald, Andrew Robinson, Antoine M van Oijen, Chi H Mak, Fabien Pinaud, Michael M Cox, Roger Woodgate, Myron F Goodman

Nucleic Acids Res. 2022 Jul 8; 50(12): 6854–6869. Published online 2022 Jun 23. doi: 10.1093/nar/gkac515

PMCID:: PMC9262582

Abstract Article PDF–7.8M

Select item 79431924.

Redox controls RecA protein activity via reversible oxidation of its methionine residues

Camille Henry, Laurent Loiseau, Alexandra Vergnes, Didier Vertommen, Angela Mérida-Floriano, Sindhu Chitteni-Pattu, Elizabeth A Wood, Josep Casadesús, Michael M Cox, Frédéric Barras, Benjamin Ezraty

eLife. 2021; 10: e63747. Published online 2021 Feb 19. doi: 10.7554/eLife.63747

PMCID:: PMC7943192

Abstract Article PDF–3.9M

Select item 75368445.

An Epistasis Analysis of recA and recN in Escherichia coli K-12

Anastasiia N. Klimova, Steven J. Sandler

Genetics. 2020 Oct; 216(2): 381–393. Published online 2020 Aug 14. doi: 10.1534/genetics.120.303476

PMCID:: PMC7536844

Abstract Article PDF–1.0M

Select item 74709386.

Single-molecule live-cell imaging reveals RecB-dependent function of DNA polymerase IV in double strand break repair

Sarah S Henrikus, Camille Henry, Amy E McGrath, Slobodan Jergic, John P McDonald, Yvonne Hellmich, Steven T Bruckbauer, Matthew L Ritger, Megan E Cherry, Elizabeth A Wood, Phuong T Pham, Myron F Goodman, Roger Woodgate, Michael M Cox, Antoine M van Oijen, Harshad Ghodke, Andrew Robinson

Nucleic Acids Res. 2020 Sep 4; 48(15): 8490–8508. Published online 2020 Jul 20. doi: 10.1093/nar/gkaa597

PMCID:: PMC7470938

Abstract Article PDF–4.3M

Select item 74561367.

Mismatch sensing by nucleofilament deciphers mechanism of RecA-mediated homologous recombination

Xingyuan Huang, Ying Lu, Shuang Wang, Mingyu Sui, Jinghua Li, Jianbing Ma, Dongfei Ma, Qi Jia, Shuxin Hu, Chunhua Xu, Ming Li

Proc Natl Acad Sci U S A. 2020 Aug 25; 117(34): 20549–20554. Published online 2020 Aug 11. doi: 10.1073/pnas.1920265117

PMCID:: PMC7456136

Abstract Article PDF–1.6M

Select item 73378998.

E. coli Rep helicase and RecA recombinase unwind G4 DNA and are important for resistance to G4-stabilizing ligands

Tapas Paul, Andrew F Voter, Rachel R Cueny, Momčilo Gavrilov, Taekjip Ha, James L Keck, Sua Myong

Nucleic Acids Res. 2020 Jul 9; 48(12): 6640–6653. Published online 2020 May 25. doi: 10.1093/nar/gkaa442

PMCID:: PMC7337899

Abstract Article PDF–3.1M

Select item 65474249.

A 5′-to-3′ strand exchange polarity is intrinsic to RecA nucleoprotein filaments in the absence of ATP hydrolysis

Yu-Hsuan Lin, Chia-Chieh Chu, Hsiu-Fang Fan, Pang-Yen Wang, Michael M Cox, Hung-Wen Li

Nucleic Acids Res. 2019 Jun 4; 47(10): 5126–5140. Published online 2019 Mar 27. doi: 10.1093/nar/gkz189

PMCID:: PMC6547424

Abstract Article PDF–3.5M

Select item 654486610.

Slow extension of the invading DNA strand in a D-loop formed by RecA-mediated homologous recombination may enhance recognition of DNA homology

Daniel Lu, Claudia Danilowicz, Tommy F. Tashjian, Chantal Prévost, Veronica G. Godoy, Mara Prentiss

J Biol Chem. 2019 May 24; 294(21): 8606–8616. Published online 2019 Apr 11. doi: 10.1074/jbc.RA119.007554

PMCID:: PMC6544866

Abstract Article PDF–1.8M

Select item 651183611.

New insights into the structures and interactions of bacterial Y-family DNA polymerases

Kęstutis Timinskas, Česlovas Venclovas

Nucleic Acids Res. 2019 May 21; 47(9): 4393–4405. Published online 2019 Mar 27. doi: 10.1093/nar/gkz198

PMCID:: PMC6511836

Abstract Article PDF–4.8M

Select item 639329812.

The positioning of Chi sites allows the RecBCD pathway to suppress some genomic rearrangements

Chastity Li, Claudia Danilowicz, Tommy F Tashjian, Veronica G Godoy, Chantal Prévost, Mara Prentiss

Nucleic Acids Res. 2019 Feb 28; 47(4): 1836–1846. Published online 2018 Dec 14. doi: 10.1093/nar/gky1252

PMCID:: PMC6393298

Abstract Article PDF–2.0M

Select item 637563113.

Conformational regulation of Escherichia coli DNA polymerase V by RecA and ATP

Malgorzata M. Jaszczur, Dan D. Vo, Ramunas Stanciauskas, Jeffrey G. Bertram, Adhirath Sikand, Michael M. Cox, Roger Woodgate, Chi H. Mak, Fabien Pinaud, Myron F. Goodman

PLoS Genet. 2019 Feb; 15(2): e1007956. Published online 2019 Feb 4. doi: 10.1371/journal.pgen.1007956

PMCID:: PMC6375631

Abstract Article PDF–4.5M

Select item 636338714.

Spatial and temporal organization of RecA in the Escherichia coli DNA-damage response

Harshad Ghodke, Bishnu P Paudel, Jacob S Lewis, Slobodan Jergic, Kamya Gopal, Zachary J Romero, Elizabeth A Wood, Roger Woodgate, Michael M Cox, Antoine M van Oijen

eLife. 2019; 8: e42761. Published online 2019 Feb 5. doi: 10.7554/eLife.42761

PMCID:: PMC6363387

Abstract Article PDF–8.2M

Select item 634137915.

The recombination mediator proteins RecFOR maintain RecA* levels for maximal DNA polymerase V Mut activity

Paromita Raychaudhury, Kenneth J. Marians

J Biol Chem. 2019 Jan 18; 294(3): 852–860. Published online 2018 Nov 27. doi: 10.1074/jbc.RA118.005726

PMCID:: PMC6341379

Abstract Article PDF–2.1M

Select item 618217416.

The ATPase activity of E. coli RecA prevents accumulation of toxic complexes formed by erroneous binding to undamaged double stranded DNA

Daniil V Gataulin, Jeffrey N Carey, Junya Li, Parisha Shah, Jennifer T Grubb, Douglas K Bishop

Nucleic Acids Res. 2018 Oct 12; 46(18): 9510–9523. Published online 2018 Aug 20. doi: 10.1093/nar/gky748

PMCID:: PMC6182174

Abstract Article PDF–6.9M

Select item 586141017.

RecA requires two molecules of Mg²⁺ ions for its optimal strand exchange activity in vitro

Raeyeong Kim, Shuji Kanamaru, Tsutomu Mikawa, Chantal Prévost, Kentaro Ishii, Kentaro Ito, Susumu Uchiyama, Masayuki Oda, Hiroshi Iwasaki, Seog K Kim, Masayuki Takahashi

Nucleic Acids Res. 2018 Mar 16; 46(5): 2548–2559. Published online 2018 Jan 30. doi: 10.1093/nar/gky048