PMC Links for GEO Profiles (Select 88146997) - PMC

Select item 81650301.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 55316112.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 49657323.

Association of six CpG-SNPs in the inflammation-related genes with coronary heart disease

Xiaomin Chen, Xiaoying Chen, Yan Xu, William Yang, Nan Wu, Huadan Ye, Jack Y. Yang, Qingxiao Hong, Yanfei Xin, Mary Qu Yang, Youping Deng, Shiwei Duan

Hum Genomics. 2016; 10(Suppl 2): 21. Published online 2016 Jul 25. doi: 10.1186/s40246-016-0067-1

PMCID:: PMC4965732

Abstract Article PDF–343K

Select item 46571614.

PAK4 promotes kinase-independent stabilization of RhoU to modulate cell adhesion

Anna E. Dart, Gary M. Box, William Court, Madeline E. Gale, John P. Brown, Sarah E. Pinder, Suzanne A. Eccles, Claire M. Wells

J Cell Biol. 2015 Nov 23; 211(4): 863–879. doi: 10.1083/jcb.201501072

PMCID:: PMC4657161

Abstract Article PDF–8.1M

Select item 45313095.

Mucosal Transcriptomics Implicates Under Expression of BRINP3 in the Pathogenesis of Ulcerative Colitis

Philip J. Smith, Adam P. Levine, Jenny Dunne, Paul Guilhamon, Mark Turmaine, Gavin W. Sewell, Nuala R. O'Shea, Roser Vega, Jennifer C. Paterson, Dahmane Oukrif, Stephan Beck, Stuart L. Bloom, Marco Novelli, Manuel Rodriguez-Justo, Andrew M. Smith, Anthony W. Segal

Inflamm Bowel Dis. 2014 Oct; 20(10): 1802–1812. Published online 2014 Aug 28. doi: 10.1097/MIB.0000000000000169

Correction in:: volume 21 on page 911

PMCID:: PMC4531309

Abstract Article PDF–671K

Select item 43679246.

Different contribution of BRINP3 gene in chronic periodontitis and peri-implantitis: a cross-sectional study

Priscila L Casado, Diego P Aguiar, Lucas C Costa, Marcos A Fonseca, Thays CS Vieira, Claudia CK Alvim-Pereira, Fabiano Alvim-Pereira, Kathleen Deeley, José M Granjeiro, Paula C Trevilatto, Alexandre R Vieira

BMC Oral Health. 2015; 15: 33. Published online 2015 Mar 11. doi: 10.1186/s12903-015-0018-6

PMCID:: PMC4367924

Abstract Article PDF–443K

Select item 41759957.

Family with Sequence Similarity 5, Member C (FAM5C) Increases Leukocyte Adhesion Molecules in Vascular Endothelial Cells: Implication in Vascular Inflammation

Junya Sato, Mitsuo Kinugasa, Seimi Satomi-Kobayashi, Kinta Hatakeyama, Aaron J. Knox, Yujiro Asada, Margaret E. Wierman, Ken-ichi Hirata, Yoshiyuki Rikitake

PLoS One. 2014; 9(9): e107236. Published online 2014 Sep 24. doi: 10.1371/journal.pone.0107236

PMCID:: PMC4175995

Abstract Article PDF–1.9M

Select item 41089848.

The Relationships Between FAM5C SNP (rs10920501) Variability and Metabolic Syndrome and Inflammation in Women With Coronary Heart Disease

Jennifer L. Cline, Theresa M. Beckie

Biol Res Nurs. Author manuscript; available in PMC 2014 Jul 24.

Published in final edited form as: Biol Res Nurs. 2013 Apr; 15(2): 160–166. Published online 2011 Oct 18. doi: 10.1177/1099800411424487

PMCID:: PMC4108984

Abstract Article PDF–99K

Select item 38265919.

Hypermethylated FAM5C and MYLK in Serum as Diagnosis and Pre-Warning Markers for Gastric Cancer

Lu Chen, Liping Su, Jianfang Li, Yanan Zheng, Beiqin Yu, Yingyan Yu, Min Yan, Qinlong Gu, Zhenggang Zhu, Bingya Liu

Dis Markers. 2012; 32(3): 195–202. Published online 2012 Feb 29. doi: 10.3233/DMA-2011-0877

PMCID:: PMC3826591

Summary PDF–1.0M

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 289646411.

Personalized Smoking Cessation: Interactions between Nicotine Dose, Dependence and Quit-Success Genotype Score

Jed E Rose, Frédérique M Behm, Tomas Drgon, Catherine Johnson, George R Uhl

Mol Med. 2010 Jul-Aug; 16(7-8): 247–253. Published online 2010 Mar 17. doi: 10.2119/molmed.2009.00159

Correction in:: Mol Med. 2012; 18(1): 729.

PMCID:: PMC2896464

Abstract Article PDF–2.4M

Select item 285093112.

FAM5C Contributes to Aggressive Periodontitis

Flavia M. Carvalho, Eduardo M. B. Tinoco, Kathleen Deeley, Poliana M. Duarte, Marcelo Faveri, Marcelo R. Marques, Adriana C. Mendonça, Xiaojing Wang, Karen Cuenco, Renato Menezes, Gustavo P. Garlet, Alexandre R. Vieira

PLoS One. 2010; 5(4): e10053. Published online 2010 Apr 7. doi: 10.1371/journal.pone.0010053

PMCID:: PMC2850931

Abstract Article PDF–396K

Select item 264781613.

Proteomic analysis reveals Hrs UIM-mediated ubiquitin signaling in multiple cellular processes

Julia W. Pridgeon, Elizabeth A. Webber, Di Sha, Lian Li, Lih-Shen Chin

FEBS J. Author manuscript; available in PMC 2010 Jan 1.

Published in final edited form as: FEBS J. 2009 Jan; 276(1): 118–131. doi: 10.1111/j.1742-4658.2008.06760.x

PMCID:: PMC2647816

Abstract Article PDF–1.6M

Select item 238387914.

Genetic and functional association of FAM5C with myocardial infarction

Jessica J Connelly, Svati H Shah, Jennifer F Doss, Shera Gadson, Sarah Nelson, David R Crosslin, A Brent Hale, Xuemei Lou, Ty Wang, Carol Haynes, David Seo, David C Crossman, Vincent Mooser, Christopher B Granger, Christopher JH Jones, William E Kraus, Elizabeth R Hauser, Simon G Gregory

BMC Med Genet. 2008; 9: 33. Published online 2008 Apr 22. doi: 10.1186/1471-2350-9-33

PMCID:: PMC2383879

Abstract Article PDF–683K

Select item 199561715.

Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study

Ramachandran S Vasan, Martin G Larson, Jayashri Aragam, Thomas J Wang, Gary F Mitchell, Sekar Kathiresan, Christopher Newton-Cheh, Joseph A Vita, Michelle J Keyes, Christopher J O'Donnell, Daniel Levy, Emelia J Benjamin

BMC Med Genet. 2007; 8(Suppl 1): S2. Published online 2007 Sep 19. doi: 10.1186/1471-2350-8-S1-S2

PMCID:: PMC1995617

Abstract Article PDF–360K

Select item 135612916.

Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes

Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-ichi Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano

Genome Res. 2006 Jan; 16(1): 55–65. doi: 10.1101/gr.4039406