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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 102333683.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 101069824.

Adaptation to high rates of chromosomal instability and aneuploidy through multiple pathways in budding yeast

Matthew N Clarke, Theodor Marsoner, Manuel Alonso Y Adell, Madhwesh C Ravichandran, Christopher S Campbell

EMBO J. 2023 Apr; 42(8): e111500. Published online 2022 Dec 19. doi: 10.15252/embj.2022111500

PMCID:: PMC10106982

Abstract Article PDF–1.2M

Select item 98363485.

A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast

Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger

G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296

PMCID:: PMC9836348

Abstract Article PDF–857K

Select item 92098116.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 83419797.

Cdc4 phospho-degrons allow differential regulation of Ame1^CENP-U protein stability across the cell cycle

Miriam Böhm, Kerstin Killinger, Alexander Dudziak, Pradeep Pant, Karolin Jänen, Simone Hohoff, Karl Mechtler, Mihkel Örd, Mart Loog, Elsa Sanchez-Garcia, Stefan Westermann

eLife. 2021; 10: e67390. Published online 2021 Jul 26. doi: 10.7554/eLife.67390

PMCID:: PMC8341979

Abstract Article PDF–5.2M

Select item 80934878.

Sirtuin 5 Is Regulated by the SCF^{Cyclin F} Ubiquitin Ligase and Is Involved in Cell Cycle Control

Christine A. Mills, Xianxi Wang, Dhaval P. Bhatt, Paul A. Grimsrud, Jacob Peter Matson, Debojyoti Lahiri, Daniel J. Burke, Jeanette Gowen Cook, Matthew D. Hirschey, Michael J. Emanuele

Mol Cell Biol. 2021 Feb; 41(2): e00269-20. Prepublished online 2020 Nov 9. Published online 2021 Jan 25. doi: 10.1128/MCB.00269-20

PMCID:: PMC8093487

Abstract Article PDF–4.3M

Select item 79394659.

Methylated PP2A stabilizes Gcn4 to enable a methionine-induced anabolic program

Adhish S. Walvekar, Ganesh Kadamur, Sreesa Sreedharan, Ritu Gupta, Rajalakshmi Srinivasan, Sunil Laxman

J Biol Chem. 2020 Dec 25; 295(52): 18390–18405. Published online 2021 Jan 13. doi: 10.1074/jbc.RA120.014248

PMCID:: PMC7939465

Abstract Article PDF–3.0M

Select item 788696110.

Redundant targeting of Isr1 by two CDKs in mitotic cells.

Emma B. Alme, David P. Toczyski

Curr Genet. Author manuscript; available in PMC 2022 Feb 1.

Published in final edited form as: Curr Genet. 2021 Feb; 67(1): 79–83. Published online 2020 Oct 15. doi: 10.1007/s00294-020-01110-x

PMCID:: PMC7886961

Abstract Article PDF–186K

Select item 780979611.

A new linear cyclin docking motif that mediates exclusively S‐phase CDK‐specific signaling

Ilona Faustova, Luka Bulatovic, Frida Matiyevskaya, Ervin Valk, Mihkel Örd, Mart Loog

EMBO J. 2021 Jan 15; 40(2): e105839. Published online 2020 Nov 19. doi: 10.15252/embj.2020105839

PMCID:: PMC7809796

Abstract Article PDF–1.9M

Select item 775691612.

SCF^Cdc4 ubiquitin ligase regulates synaptonemal complex formation during meiosis

Zhihui Zhu, Mohammad Bani Ismail, Miki Shinohara, Akira Shinohara

Life Sci Alliance. 2021 Feb; 4(2): e202000933. Published online 2020 Dec 7. doi: 10.26508/lsa.202000933

PMCID:: PMC7756916

Abstract Article PDF–3.9M

Select item 771875113.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 768298814.

The deubiquitylase Ubp15 couples transcription to mRNA export

Fanny Eyboulet, Célia Jeronimo, Jacques Côté, François Robert

eLife. 2020; 9: e61264. Published online 2020 Nov 23. doi: 10.7554/eLife.61264

PMCID:: PMC7682988

Abstract Article PDF–1.4M

Select item 734032115.

The kinase Isr1 negatively regulates hexosamine biosynthesis in S. cerevisiae

Emma B. Alme, Erica Stevenson, Nevan J. Krogan, Danielle L. Swaney, David P. Toczyski

PLoS Genet. 2020 Jun; 16(6): e1008840. Published online 2020 Jun 24. doi: 10.1371/journal.pgen.1008840

PMCID:: PMC7340321

Abstract Article PDF–2.8M

Select item 703273216.

Skp, Cullin, F-box (SCF)-Met30 and SCF-Cdc4-Mediated Proteolysis of CENP-A Prevents Mislocalization of CENP-A for Chromosomal Stability in Budding Yeast

Wei-Chun Au, Tianyi Zhang, Prashant K. Mishra, Jessica R. Eisenstatt, Robert L. Walker, Josefina Ocampo, Anthony Dawson, Jack Warren, Michael Costanzo, Anastasia Baryshnikova, Karin Flick, David J. Clark, Paul S. Meltzer, Richard E. Baker, Chad Myers, Charles Boone, Peter Kaiser, Munira A. Basrai

PLoS Genet. 2020 Feb; 16(2): e1008597. Published online 2020 Feb 7. doi: 10.1371/journal.pgen.1008597

PMCID:: PMC7032732

Abstract Article PDF–3.9M

Select item 677023717.

The Proteasome Lid Triggers COP9 Signalosome Activity during the Transition of Saccharomyces cerevisiae Cells into Quiescence

Laylan Bramasole, Abhishek Sinha, Dana Harshuk, Angela Cirigliano, Gurevich Sylvia, Zanlin Yu, Rinat Lift Carmeli, Michael H. Glickman, Teresa Rinaldi, Elah Pick

Biomolecules. 2019 Sep; 9(9): 449. Published online 2019 Sep 4. doi: 10.3390/biom9090449

PMCID:: PMC6770237

Abstract Article PDF–2.2M

Select item 647288018.

Saccharomyces cerevisiae Gle2/Rae1 is involved in septin organization, essential for cell cycle progression

Gesa Zander, Wilfried Kramer, Anika Seel, Heike Krebber

Yeast. 2017 Nov; 34(11): 459–470. Published online 2017 Sep 28. doi: 10.1002/yea.3249

PMCID:: PMC6472880

Abstract Article PDF–1.9M

Select item 621571319.

Systematic Analysis of Complex Genetic Interactions

Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers

Science. Author manuscript; available in PMC 2018 Nov 4.

Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729

PMCID:: PMC6215713

Abstract Article PDF–1.9M

Select item 621540920.

Novel phosphorylation states of the yeast spindle pole body

Kimberly K. Fong, Alex Zelter, Beth Graczyk, Jill M. Hoyt, Michael Riffle, Richard Johnson, Michael J. MacCoss, Trisha N. Davis

Biol Open. 2018 Oct 15; 7(10): bio033647. Published online 2018 Jun 14. doi: 10.1242/bio.033647

PMCID:: PMC6215409

Abstract Article PDF–1.1M

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