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Items: 1 to 20 of 108

1.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
2.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
3.
ISW1a modulates cohesin distribution in centromeric and pericentromeric regions
Ireneusz Litwin, Małgorzata Nowicka, Katarzyna Markowska, Ewa Maciaszczyk-Dziubińska, Paulina Tomaszewska, Robert Wysocki, Karol Kramarz
Nucleic Acids Res. 2023 Sep 22; 51(17): 9101–9121. Published online 2023 Jul 24. doi: 10.1093/nar/gkad612
PMCID:
PMC10516642
AbstractArticlePDF–2.8M
4.
The SAGA HAT module is tethered by its SWIRM domain and modulates activity of the SAGA DUB module
Sara T. Haile, Sanim Rahman, James K. Fields, Benjamin C. Orsburn, Namandjé N. Bumpus, Cynthia Wolberger
Biochim Biophys Acta Gene Regul Mech. Author manuscript; available in PMC 2023 Jun 1.
Published in final edited form as: Biochim Biophys Acta Gene Regul Mech. 2023 Jun; 1866(2): 194929. Published online 2023 Mar 24. doi: 10.1016/j.bbagrm.2023.194929
PMCID:
PMC10226619
AbstractArticlePDF–1.8M
5.
A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast
Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger
G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296
PMCID:
PMC9836348
AbstractArticlePDF–857K
6.
Conformational landscape of the yeast SAGA complex as revealed by cryo-EM
Diana Vasyliuk, Joeseph Felt, Ellen D. Zhong, Bonnie Berger, Joseph H. Davis, Calvin K. Yip
Sci Rep. 2022; 12: 12306. Published online 2022 Jul 19. doi: 10.1038/s41598-022-16391-0
PMCID:
PMC9296673
AbstractArticlePDF–3.9M
7.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
8.
Genetic screen for suppressors of increased silencing in rpd3 mutants in Saccharomyces cerevisiae identifies a potential role for H3K4 methylation
Richard A Kleinschmidt, Laurie M Lyon, Samantha L Smith, Jonah Rittenberry, K Maeve Lawless, Anabelle A Acosta, David Donze
G3 (Bethesda) 2021 Nov; 11(11): jkab309. Published online 2021 Sep 17. doi: 10.1093/g3journal/jkab309
PMCID:
PMC8527511
AbstractArticlePDF–808K
9.
FACT interacts with Set3 HDAC and fine-tunes GAL1 transcription in response to environmental stimulation
He Leng, Shaofeng Liu, Yang Lei, Yuantao Tang, Shijia Gu, Jiazhi Hu, She Chen, Jianxun Feng, Qing Li
Nucleic Acids Res. 2021 Jun 4; 49(10): 5502–5519. Published online 2021 May 8. doi: 10.1093/nar/gkab312
PMCID:
PMC8191775
AbstractArticlePDF–3.0M
10.
SAGA and SAGA-like SLIK transcriptional coactivators are structurally and biochemically equivalent
Klaudia Adamus, Cyril Reboul, Jarrod Voss, Cheng Huang, Ralf B. Schittenhelm, Sarah N. Le, Andrew M. Ellisdon, Hans Elmlund, Marion Boudes, Dominika Elmlund
J Biol Chem. 2021 Jan-Jun; 296: 100671. Published online 2021 Apr 15. doi: 10.1016/j.jbc.2021.100671
PMCID:
PMC8131915
AbstractArticlePDF–2.0M
11.
Pex35 is a regulator of peroxisome abundance
Ido Yofe, Kareem Soliman, Silvia G. Chuartzman, Bruce Morgan, Uri Weill, Eden Yifrach, Tobias P. Dick, Sara J. Cooper, Christer S. Ejsing, Maya Schuldiner, Einat Zalckvar, Sven Thoms
J Cell Sci. Author manuscript; available in PMC 2021 Jul 24.
Published in final edited form as: J Cell Sci. 2017 Feb 15; 130(4): 791–804. Published online 2017 Jan 3. doi: 10.1242/jcs.187914
PMCID:
PMC7611368
AbstractArticlePDF–2.3M
12.
SAGA–CORE subunit Spt7 is required for correct Ubp8 localization, chromatin association and deubiquitinase activity
Carme Nuño-Cabanes, Varinia García-Molinero, Manuel Martín-Expósito, María-Eugenia Gas, Paula Oliete-Calvo, Encar García-Oliver, María de la Iglesia-Vayá, Susana Rodríguez-Navarro
Epigenetics Chromatin. 2020; 13: 46. Published online 2020 Oct 28. doi: 10.1186/s13072-020-00367-3
PMCID:
PMC7594455
AbstractArticlePDF–1.9M
13.
Chaperone-Mediated Protein Disaggregation Triggers Proteolytic Clearance of Intra-nuclear Protein Inclusions
Fabian den Brave, Lucas V. Cairo, Chandhuru Jagadeesan, Carmen Ruger-Herreros, Axel Mogk, Bernd Bukau, Stefan Jentsch
Cell Rep. 2020 Jun 2; 31(9): 107680. Published online 2020 Jun 2. doi: 10.1016/j.celrep.2020.107680
PMCID:
PMC7273177
AbstractArticle
14.
Inhibition of histone acetyltransferase GCN5 extends lifespan in both yeast and human cell lines
Boyue Huang, Dandan Zhong, Jie Zhu, Yongpan An, Miaomiao Gao, Shuai Zhu, Weiwei Dang, Xin Wang, Baoxue Yang, Zhengwei Xie
Aging Cell. 2020 Apr; 19(4): e13129. Published online 2020 Mar 11. doi: 10.1111/acel.13129
PMCID:
PMC7189995
AbstractArticlePDF–2.7M
15.
Structure of transcription coactivator SAGA
Haibo Wang, Christian Dienemann, Alexandra Stützer, Henning Urlaub, Alan C.M. Cheung, Patrick Cramer
Nature. Author manuscript; available in PMC 2020 Jul 22.
Published in final edited form as: Nature. 2020 Jan; 577(7792): 717–720. Published online 2020 Jan 22. doi: 10.1038/s41586-020-1933-5
PMCID:
PMC6994259
AbstractArticlePDF–4.1M
16.
Gcn5 and Esa1 function as histone crotonyltransferases to regulate crotonylation-dependent transcription
Leonie Kollenstart, Anton J. L. de Groot, George M. C. Janssen, Xue Cheng, Kees Vreeken, Fabrizio Martino, Jacques Côté, Peter A. van Veelen, Haico van Attikum
J Biol Chem. 2019 Dec 27; 294(52): 20122–20134. Published online 2019 Nov 7. doi: 10.1074/jbc.RA119.010302
PMCID:
PMC6937567
AbstractArticlePDF–2.8M
17.
Tsr4 and Nap1, two novel members of the ribosomal protein chaperOME
Ingrid Rössler, Julia Embacher, Benjamin Pillet, Guillaume Murat, Laura Liesinger, Jutta Hafner, Julia Judith Unterluggauer, Ruth Birner-Gruenberger, Dieter Kressler, Brigitte Pertschy
Nucleic Acids Res. 2019 Jul 26; 47(13): 6984–7002. Published online 2019 May 7. doi: 10.1093/nar/gkz317
PMCID:
PMC6648895
AbstractArticlePDF–14M
18.
Architecture of Saccharomyces cerevisiae SAGA complex
Gaochao Liu, Xiangdong Zheng, Haipeng Guan, Yong Cao, Hongyuan Qu, Junqing Kang, Xiangle Ren, Jianlin Lei, Meng-Qiu Dong, Xueming Li, Haitao Li
Cell Discov. 2019; 5: 25. Published online 2019 May 7. doi: 10.1038/s41421-019-0094-x
PMCID:
PMC6502868
ArticlePDF–1.2M
19.
A synthetic non-histone substrate to study substrate targeting by the Gcn5 HAT and sirtuin HDACs
Anthony Rössl, Alix Denoncourt, Mong-Shang Lin, Michael Downey
J Biol Chem. 2019 Apr 19; 294(16): 6227–6239. Published online 2019 Feb 25. doi: 10.1074/jbc.RA118.006051
PMCID:
PMC6484106
AbstractArticlePDF–1.7M
20.
A role for Mog1 in H2Bub1 and H3K4me3 regulation affecting RNAPII transcription and mRNA export
Paula Oliete‐Calvo, Joan Serrano‐Quílez, Carme Nuño‐Cabanes, María E Pérez‐Martínez, Luis M Soares, Bernhard Dichtl, Stephen Buratowski, José E Pérez‐Ortín, Susana Rodríguez‐Navarro
EMBO Rep. 2018 Nov; 19(11): e45992. Published online 2018 Sep 24. doi: 10.15252/embr.201845992
PMCID:
PMC6216277
AbstractArticlePDF–1.7M

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