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Select item 111094831.

K48- and K63-linked ubiquitin chain interactome reveals branch- and length-specific ubiquitin interactors

Anita Waltho, Oliver Popp, Christopher Lenz, Lukas Pluska, Mahil Lambert, Volker Dötsch, Philipp Mertins, Thomas Sommer

Life Sci Alliance. 2024 Aug; 7(8): e202402740. Published online 2024 May 21. doi: 10.26508/lsa.202402740

PMCID:: PMC11109483

Abstract Article PDF–2.9M

Select item 108724772.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 108512283.

The yeast AMP-activated protein kinase Snf1 phosphorylates the inositol polyphosphate kinase Kcs1

Sham Sunder, Joshua S. Bauman, Stuart J. Decker, Alexandra R. Lifton, Anuj Kumar

J Biol Chem. 2024 Feb; 300(2): 105657. Published online 2024 Jan 13. doi: 10.1016/j.jbc.2024.105657

PMCID:: PMC10851228

Abstract Article PDF–3.1M

Select item 107001384.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 106918785.

Opi1-mediated transcriptional modulation orchestrates genotoxic stress response in budding yeast

Giovanna Marques Panessa, Eduardo Tassoni-Tsuchida, Marina Rodrigues Pires, Rodrigo Rodrigues Felix, Rafaella Jekabson, Nadja Cristhina de Souza-Pinto, Fernanda Marques da Cunha, Onn Brandman, José Renato Rosa Cussiol

Genetics. 2023 Sep; 225(1): iyad130. Published online 2023 Jul 13. doi: 10.1093/genetics/iyad130

PMCID:: PMC10691878

Abstract Article PDF–1.3M

Select item 102977006.

The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions

Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman

Mol Cell. Author manuscript; available in PMC 2024 Jun 15.

Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021

PMCID:: PMC10297700

Abstract Article PDF–2.0M

Select item 102333687.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 98363488.

A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast

Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger

G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296

PMCID:: PMC9836348

Abstract Article PDF–857K

Select item 92098119.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 916991310.

The ubiquitin–proteasome system regulates meiotic chromosome organization

Xiao Yang, Meihui Song, Ying Wang, Taicong Tan, Zhongyu Tian, Binyuan Zhai, Xuan Yang, Yingjin Tan, Yanding Cao, Shaojun Dai, Shunxin Wang, Liangran Zhang

Proc Natl Acad Sci U S A. 2022 Apr 26; 119(17): e2106902119. Published online 2022 Apr 19. doi: 10.1073/pnas.2106902119

PMCID:: PMC9169913

Abstract Article PDF–2.1M

Select item 835352611.

The RNA-binding protein Puf5 contributes to buffering of mRNA upon chromatin-mediated changes in nascent transcription

David Z. Kochan, Julia S. P. Mawer, Jennifer Massen, Kiril Tishinov, Swati Parekh, Martin Graef, Anne Spang, Peter Tessarz

J Cell Sci. 2021 Aug 1; 134(15): jcs259051. Published online 2021 Aug 5. doi: 10.1242/jcs.259051

PMCID:: PMC8353526

Abstract Article

Select item 828266412.

Ist2 recruits the lipid transporters Osh6/7 to ER–PM contacts to maintain phospholipid metabolism

Andrew King On Wong, Barry Paul Young, Christopher J.R. Loewen

J Cell Biol. 2021 Sep 6; 220(9): e201910161. Published online 2021 Jul 14. doi: 10.1083/jcb.201910161

PMCID:: PMC8282664

Abstract Article PDF–7.6M

Select item 781587413.

Increasing glycolysis by deletion of kcs1 and arg82 improved S-adenosyl-l-methionine production in Saccharomyces cerevisiae

Hailong Chen, Nianqing Zhu, Yan Wang, Xinxin Gao, Yuhe Song, Jia Zheng, Jiaping Peng, Xin Zhang

AMB Express. 2021; 11: 20. Published online 2021 Jan 19. doi: 10.1186/s13568-021-01179-8

PMCID:: PMC7815874

Abstract Article PDF–2.5M

Select item 772147514.

A Selective Autophagy Pathway for Phase-Separated Endocytic Protein Deposits

Florian Wilfling, Chia-Wei Lee, Philipp S. Erdmann, Yumei Zheng, Dawafuti Sherpa, Stefan Jentsch, Boris Pfander, Brenda A. Schulman, Wolfgang Baumeister

Mol Cell. 2020 Dec 3; 80(5): 764–778.e7. doi: 10.1016/j.molcel.2020.10.030

PMCID:: PMC7721475

Abstract Article

Select item 761136815.

Pex35 is a regulator of peroxisome abundance

Ido Yofe, Kareem Soliman, Silvia G. Chuartzman, Bruce Morgan, Uri Weill, Eden Yifrach, Tobias P. Dick, Sara J. Cooper, Christer S. Ejsing, Maya Schuldiner, Einat Zalckvar, Sven Thoms

J Cell Sci. Author manuscript; available in PMC 2021 Jul 24.

Published in final edited form as: J Cell Sci. 2017 Feb 15; 130(4): 791–804. Published online 2017 Jan 3. doi: 10.1242/jcs.187914

PMCID:: PMC7611368

Abstract Article PDF–2.3M

Select item 758743216.

IP₇-SPX Domain Interaction Controls Fungal Virulence by Stabilizing Phosphate Signaling Machinery

Desmarini Desmarini, Sophie Lev, David Furkert, Ben Crossett, Adolfo Saiardi, Keren Kaufman-Francis, Cecilia Li, Tania C. Sorrell, Lorna Wilkinson-White, Jacqueline Matthews, Dorothea Fiedler, Julianne Teresa Djordjevic

mBio. 2020 Sep-Oct; 11(5): e01920-20. Published online 2020 Oct 20. doi: 10.1128/mBio.01920-20

PMCID:: PMC7587432

Abstract Article PDF–3.0M

Select item 725449217.

Pho85 and PI(4,5)P₂ regulate different lipid metabolic pathways in response to cold

Jose A. Prieto, Francisco Estruch, Isaac Córcoles-Sáez, Maurizio Del Poeta, Robert Rieger, Irene Stenzel, Francisca Randez-Gil

Biochim Biophys Acta Mol Cell Biol Lipids. Author manuscript; available in PMC 2020 May 28.

Published in final edited form as: Biochim Biophys Acta Mol Cell Biol Lipids. 2020 Feb; 1865(2): 158557. Published online 2019 Oct 31. doi: 10.1016/j.bbalip.2019.158557