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Items: 1 to 20 of 22

1.
HDAC6 promotes inflammation in lupus nephritis mice by regulating transcription factors MAFF and KLF5 in renal fibrosis
Meihui Deng, Xiao Tan, Xiaojie Peng, Weimin Zheng, Rui Fu, Shanshan Tao
Ren Fail. 2024; 46(2): 2415517. Published online 2024 Oct 16. doi: 10.1080/0886022X.2024.2415517
PMCID:
PMC11485742
AbstractArticlePDF–3.0M
2.
The transcription factor MAFF regulates an atherosclerosis relevant network connecting inflammation and cholesterol metabolism
Moritz von Scheidt, Yuqi Zhao, Thomas Q. de Aguiar Vallim, Nam Che, Michael Wierer, Marcus M. Seldin, Oscar Franzén, Zeyneb Kurt, Shichao Pang, Dario Bongiovanni, Masayuki Yamamoto, Peter A. Edwards, Arno Ruusalepp, Jason C. Kovacic, Matthias Mann, Johan L.M. Björkegren, Aldons J. Lusis, Xia Yang, Heribert Schunkert
Circulation. Author manuscript; available in PMC 2022 May 4.
Published in final edited form as: Circulation. 2021 May 4; 143(18): 1809–1823. Published online 2021 Feb 25. doi: 10.1161/CIRCULATIONAHA.120.050186
PMCID:
PMC8124091
AbstractArticlePDF–2.0M
3.
Widespread and dynamic translational control of red blood cell development
Juan R. Alvarez-Dominguez, Xu Zhang, Wenqian Hu
Blood. 2017 Feb 2; 129(5): 619–629. Prepublished online 2016 Nov 29. doi: 10.1182/blood-2016-09-741835
PMCID:
PMC5290990
AbstractArticle
4.
Compound mouse mutants of bZIP transcription factors Mafg and Mafk reveal a regulatory network of non-crystallin genes associated with cataract
Smriti A. Agrawal, Deepti Anand, Archana D. Siddam, Atul Kakrana, Soma Dash, David A. Scheiblin, Christine A. Dang, Anne M. Terrell, Stephanie M. Waters, Abhyudai Singh, Hozumi Motohashi, Masayuki Yamamoto, Salil A. Lachke
Hum Genet. Author manuscript; available in PMC 2016 Jul 1.
Published in final edited form as: Hum Genet. 2015 Jul; 134(7): 717–735. Published online 2015 Apr 21. doi: 10.1007/s00439-015-1554-5
PMCID:
PMC4486474
AbstractArticlePDF–4.4M
5.
Insm1 promotes endocrine cell differentiation by modulating the expression of a network of genes that includes Neurog3 and Ripply3
Anna B. Osipovich, Qiaoming Long, Elisabetta Manduchi, Rama Gangula, Susan B. Hipkens, Judsen Schneider, Tadashi Okubo, Christian J. Stoeckert, Jr, Shinji Takada, Mark A. Magnuson
Development. 2014 Aug; 141(15): 2939–2949. doi: 10.1242/dev.104810
PMCID:
PMC4197673
AbstractArticle
6.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
7.
Nrf2–MafG heterodimers contribute globally to antioxidant and metabolic networks
Yosuke Hirotsu, Fumiki Katsuoka, Ryo Funayama, Takeshi Nagashima, Yuichiro Nishida, Keiko Nakayama, James Douglas Engel, Masayuki Yamamoto
Nucleic Acids Res. 2012 Nov; 40(20): 10228–10239. Published online 2012 Sep 8. doi: 10.1093/nar/gks827
PMCID:
PMC3488259
AbstractArticlePDF–6.8M
8.
A Genome-Wide Screen to Identify Transcription Factors Expressed in Pelvic Ganglia of the Lower Urinary Tract
Carrie B. Wiese, Sara Ireland, Nicole L. Fleming, Jing Yu, M. Todd Valerius, Kylie Georgas, Han Sheng Chiu, Jane Brennan, Jane Armstrong, Melissa H. Little, Andrew P. McMahon, E. Michelle Southard-Smith
Front Neurosci. 2012; 6: 130. Published online 2012 Sep 12. doi: 10.3389/fnins.2012.00130
PMCID:
PMC3439845
AbstractArticlePDF–1.4M
9.
Embryonic Lethality and Fetal Liver Apoptosis in Mice Lacking All Three Small Maf Proteins
Hiromi Yamazaki, Fumiki Katsuoka, Hozumi Motohashi, James Douglas Engel, Masayuki Yamamoto
Mol Cell Biol. 2012 Feb; 32(4): 808–816. doi: 10.1128/MCB.06543-11
PMCID:
PMC3272985
AbstractArticlePDF–1.8M
10.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
11.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
12.
An atlas of combinatorial transcriptional regulation in mouse and man
The FANTOM consortium and RIKEN Omics Science Center
Cell. Author manuscript; available in PMC 2011 Mar 5.
Published in final edited form as: Cell. 2010 Mar 5; 140(5): 744–752. doi: 10.1016/j.cell.2010.01.044
Correction in:
volume 141 on page 369
PMCID:
PMC2836267
AbstractArticlePDF–2.2M
13.
Exquisite Sensitivity of TP53 Mutant and Basal Breast Cancers to a Dose-Dense Epirubicin−Cyclophosphamide Regimen
Philippe Bertheau, Elisabeth Turpin, David S Rickman, Marc Espié, Aurélien de Reyniès, Jean-Paul Feugeas, Louis-François Plassa, Hany Soliman, Mariana Varna, Anne de Roquancourt, Jacqueline Lehmann-Che, Yves Beuzard, Michel Marty, Jean-Louis Misset, Anne Janin, Hugues de Thé
PLoS Med. 2007 Mar; 4(3): e90. Published online 2007 Mar 20. doi: 10.1371/journal.pmed.0040090
PMCID:
PMC1831731
AbstractArticlePDF–528K
14.
Genetic Evidence that Small Maf Proteins Are Essential for the Activation of Antioxidant Response Element-Dependent Genes
Fumiki Katsuoka, Hozumi Motohashi, Tetsuro Ishii, Hiroyuki Aburatani, James Douglas Engel, Masayuki Yamamoto
Mol Cell Biol. 2005 Sep; 25(18): 8044–8051. doi: 10.1128/MCB.25.18.8044-8051.2005
PMCID:
PMC1234339
AbstractArticlePDF–224K
15.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
16.
Small Maf proteins serve as transcriptional cofactors for keratinocyte differentiation in the Keap1–Nrf2 regulatory pathway
Hozumi Motohashi, Fumiki Katsuoka, James Douglas Engel, Masayuki Yamamoto
Proc Natl Acad Sci U S A. 2004 Apr 27; 101(17): 6379–6384. Published online 2004 Apr 15. doi: 10.1073/pnas.0305902101
PMCID:
PMC404053
AbstractArticlePDF–540K
17.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
18.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
19.
GenePaint.org: an atlas of gene expression patterns in the mouse embryo
Axel Visel, Christina Thaller, Gregor Eichele
Nucleic Acids Res. 2004 Jan 1; 32(Database issue): D552–D556. doi: 10.1093/nar/gkh029
PMCID:
PMC308763
AbstractArticlePDF–253K
20.
Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention
Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands
Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100
Correction in:
Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.
PMCID:
PMC283554
AbstractArticlePDF–481K

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