PMC Links for GEO Profiles (Select 90329560) - PMC

Select item 99806981.

Increased SORBS3 expression in brain ageing contributes to autophagic decline via YAP1-WWTR1/TAZ signaling

So Jung Park, Rebecca A. Frake, David C. Rubinsztein

Autophagy. 2023; 19(3): 943–944. Published online 2022 Jul 12. doi: 10.1080/15548627.2022.2100106

PMCID:: PMC9980698

Select item 90907682.

Vinexin contributes to autophagic decline in brain ageing across species

So Jung Park, Rebecca A. Frake, Cansu Karabiyik, Sung Min Son, Farah H. Siddiqi, Carla F. Bento, Peter Sterk, Mariella Vicinanza, Mariana Pavel, David C. Rubinsztein

Cell Death Differ. 2022 May; 29(5): 1055–1070. Published online 2021 Nov 30. doi: 10.1038/s41418-021-00903-y

PMCID:: PMC9090768

Abstract Article PDF–4.8M

Select item 79387703.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 67335724.

Tuning of Glutamate, But Not GABA, Release by an Intrasynaptic Vesicle APP Domain Whose Function Can Be Modulated by β- or α-Secretase Cleavage

Wen Yao, Marc D. Tambini, Xinran Liu, Luciano D'Adamio

J Neurosci. 2019 Aug 28; 39(35): 6992–7005. doi: 10.1523/JNEUROSCI.0207-19.2019

PMCID:: PMC6733572

Abstract Article PDF–2.9M

Select item 60705245.

Vinexin family (SORBS) proteins regulate mechanotransduction in mesenchymal stem cells

Mito Kuroda, Kazumitsu Ueda, Noriyuki Kioka

Sci Rep. 2018; 8: 11581. Published online 2018 Aug 1. doi: 10.1038/s41598-018-29700-3

PMCID:: PMC6070524

Abstract Article PDF–6.5M

Select item 56654436.

Vinexin family (SORBS) proteins play different roles in stiffness-sensing and contractile force generation

Takafumi Ichikawa, Masahiro Kita, Tsubasa S. Matsui, Ayaka Ichikawa Nagasato, Tomohiko Araki, Shian-Huey Chiang, Takuhito Sezaki, Yasuhisa Kimura, Kazumitsu Ueda, Shinji Deguchi, Alan R. Saltiel, Noriyuki Kioka

J Cell Sci. 2017 Oct 15; 130(20): 3517–3531. doi: 10.1242/jcs.200691

PMCID:: PMC5665443

Abstract Article

Select item 55237607.

Vinexin β Ablation Inhibits Atherosclerosis in Apolipoprotein E–Deficient Mice by Inactivating the Akt–Nuclear Factor κB Inflammatory Axis

Hongjing Guan, Wen‐Lin Cheng, Junhong Guo, Meng‐Lin Chao, Yan Zhang, Jun Gong, Xue‐Yong Zhu, Zhi‐Gang She, Zan Huang, Hongliang Li

J Am Heart Assoc. 2017 Feb; 6(2): e004585. Published online 2017 Feb 16. doi: 10.1161/JAHA.116.004585

PMCID:: PMC5523760

Abstract Article PDF–5.1M

Select item 53812268.

Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function

Tingting Zhang, Wei Du, Andrew F. Wilson, Satoshi H. Namekawa, Paul R. Andreassen, Amom Ruhikanta Meetei, Qishen Pang

Sci Rep. 2017; 7: 45626. Published online 2017 Apr 5. doi: 10.1038/srep45626

PMCID:: PMC5381226

Abstract Article PDF–1.4M

Select item 40858169.

Retinoic acid receptors are required for skeletal growth, matrix homeostasis and growth plate function in postnatal mouse

Julie A. Williams, Naoki Kondo, Takahiro Okabe, Nobuo Takashita, Diane M. Pilchak, Eiki Koyama, Takanaga Ochiai, Deborah Jensen, Motomi Enomoto-Iwamoto, Mon-Li Chu, Norbert Ghyselinck, Pierre Chambon, Maurizio Pacifici, Masahiro Iwamoto

Dev Biol. Author manuscript; available in PMC 2014 Jul 8.

Published in final edited form as: Dev Biol. 2009 Apr 15; 328(2): 315–327. Published online 2009 Feb 3. doi: 10.1016/j.ydbio.2009.01.031

PMCID:: PMC4085816

Abstract Article PDF–3.2M

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 302253411.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 214811712.

Vinexin: A Novel Vinculin-binding Protein with Multiple SH3 Domains Enhances Actin Cytoskeletal Organization

Noriyuki Kioka, Shohei Sakata, Takeshi Kawauchi, Teruo Amachi, Steven K. Akiyama, Kenji Okazaki, Christopher Yaen, Kenneth M. Yamada, Shin-ichi Aota

J Cell Biol. 1999 Jan 11; 144(1): 59–69. doi: 10.1083/jcb.144.1.59

PMCID:: PMC2148117

Abstract Article PDF–1.4M

Select item 31099213.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098014.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924115.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 2980016.

Database resources of the National Center for Biotechnology Information

David L. Wheeler, Deanna M. Church, Alex E. Lash, Detlef D. Leipe, Thomas L. Madden, Joan U. Pontius, Gregory D. Schuler, Lynn M. Schriml, Tatiana A. Tatusova, Lukas Wagner, Barbara A. Rapp

Nucleic Acids Res. 2001 Jan 1; 29(1): 11–16. doi: 10.1093/nar/29.1.11

PMCID:: PMC29800

Abstract Article PDF–101K

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