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Select item 111905731.

TBX3 is essential for establishment of the posterior boundary of anterior genes and upregulation of posterior genes together with HAND2 during the onset of limb bud development

Geoffrey Soussi, Ausra Girdziusaite, Shalu Jhanwar, Victorio Palacio, Marco Notaro, Rushikesh Sheth, Rolf Zeller, Aimée Zuniga

Development. 2024 Jun 1; 151(11): dev202722. Published online 2024 Jun 3. doi: 10.1242/dev.202722

PMCID:: PMC11190573

Abstract Article

Select item 109787352.

Functional analysis of a first hindlimb positioning enhancer via Gdf11 expression

Seiji Saito, Utsugi Kanazawa, Ayana Tatsumi, Atsuo Iida, Tatsuya Takemoto, Takayuki Suzuki

Front Cell Dev Biol. 2024; 12: 1302141. Published online 2024 Mar 15. doi: 10.3389/fcell.2024.1302141

PMCID:: PMC10978735

Abstract Article PDF–3.4M

Select item 105892973.

Hnrnpk is essential for embryonic limb bud development as a transcription activator and a collaborator of insulator protein Ctcf

Yuyu Chen, Taifeng Zhou, Zhiheng Liao, Wenjie Gao, Jinna Wu, Shun Zhang, Yongyong Li, Hengyu Liu, Hang Zhou, Caixia Xu, Peiqiang Su

Cell Death Differ. 2023 Oct; 30(10): 2293–2308. Published online 2023 Aug 22. doi: 10.1038/s41418-023-01207-z

PMCID:: PMC10589297

Abstract Article PDF–16M

Select item 92058574.

Context-dependent enhancer function revealed by targeted inter-TAD relocation

Christopher Chase Bolt, Lucille Lopez-Delisle, Aurélie Hintermann, Bénédicte Mascrez, Antonella Rauseo, Guillaume Andrey, Denis Duboule

Nat Commun. 2022; 13: 3488. Published online 2022 Jun 17. doi: 10.1038/s41467-022-31241-3

PMCID:: PMC9205857

Abstract Article PDF–2.3M

Select item 87526745.

Breaking constraint of mammalian axial formulae

Gabriel M. Hauswirth, Victoria C. Garside, Lisa S. F. Wong, Heidi Bildsoe, Jan Manent, Yi-Cheng Chang, Christian M. Nefzger, Jaber Firas, Joseph Chen, Fernando J. Rossello, Jose M. Polo, Edwina McGlinn

Nat Commun. 2022; 13: 243. Published online 2022 Jan 11. doi: 10.1038/s41467-021-27335-z

PMCID:: PMC8752674

Abstract Article PDF–4.8M

Select item 86129986.

Genetic basis for an evolutionary shift from ancestral preaxial to postaxial limb polarity in non-urodele vertebrates

Anna Trofka, Bau-Lin Huang, Jianjian Zhu, William F Heinz, Valentin Magidson, Yuki Shibata, Yun-Bo Shi, Basile Tarchini, H Scott Stadler, Mirindi Kabangu, Nour W Al Haj Baddar, S. Randal Voss, Susan Mackem

Curr Biol. Author manuscript; available in PMC 2022 Nov 22.

Published in final edited form as: Curr Biol. 2021 Nov 22; 31(22): 4923–4934.e5. Published online 2021 Oct 4. doi: 10.1016/j.cub.2021.09.010

PMCID:: PMC8612998

Abstract Article PDF–2.7M

Select item 85596747.

Sequential in cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse HoxD cluster

Ana Rita Amândio, Leonardo Beccari, Lucille Lopez-Delisle, Bénédicte Mascrez, Jozsef Zakany, Sandra Gitto, Denis Duboule

Genes Dev. 2021 Nov 1; 35(21-22): 1490–1509. doi: 10.1101/gad.348934.121

PMCID:: PMC8559674

Abstract Article PDF–22M

Select item 83739318.

Mesomelic dysplasias associated with the HOXD locus are caused by regulatory reallocations

Christopher Chase Bolt, Lucille Lopez-Delisle, Bénédicte Mascrez, Denis Duboule

Nat Commun. 2021; 12: 5013. Published online 2021 Aug 18. doi: 10.1038/s41467-021-25330-y

PMCID:: PMC8373931

Abstract Article PDF–3.1M

Select item 83622919.

Geminin is required for Hox gene regulation to pattern the developing limb

Emily M.A. Lewis, Savita Sankar, Caili Tong, Ethan Patterson, Laura E. Waller, Paul Gontarz, Bo Zhang, David M. Ornitz, Kristen L. Kroll

Dev Biol. Author manuscript; available in PMC 2021 Aug 13.

Published in final edited form as: Dev Biol. 2020 Aug 1; 464(1): 11–23. Published online 2020 May 23. doi: 10.1016/j.ydbio.2020.05.007

PMCID:: PMC8362291

Abstract Article PDF–2.6M

Select item 827773610.

Hox11 expression characterizes developing zeugopod synovial joints and is coupled to postnatal articular cartilage morphogenesis into functional zones in mice

Danielle Rux, Kimberly Helbig, Eiki Koyama, Maurizio Pacifici

Dev Biol. Author manuscript; available in PMC 2022 Sep 1.

Published in final edited form as: Dev Biol. 2021 Sep; 477: 49–63. Published online 2021 May 16. doi: 10.1016/j.ydbio.2021.05.007

PMCID:: PMC8277736

Abstract Article PDF–6.7M

Select item 773385711.

Chromatin topology and the timing of enhancer function at the HoxD locus

Eddie Rodríguez-Carballo, Lucille Lopez-Delisle, Andréa Willemin, Leonardo Beccari, Sandra Gitto, Bénédicte Mascrez, Denis Duboule

Proc Natl Acad Sci U S A. 2020 Dec 8; 117(49): 31231–31241. Published online 2020 Nov 23. doi: 10.1073/pnas.2015083117

PMCID:: PMC7733857

Abstract Article PDF–2.5M

Select item 770466612.

Lysine demethylase 7a regulates murine anterior-posterior development by modulating the transcription of Hox gene cluster

Yoshiki Higashijima, Nao Nagai, Masamichi Yamamoto, Taro Kitazawa, Yumiko K. Kawamura, Akashi Taguchi, Natsuko Nakada, Masaomi Nangaku, Tetsushi Furukawa, Hiroyuki Aburatani, Hiroki Kurihara, Youichiro Wada, Yasuharu Kanki

Commun Biol. 2020; 3: 725. Published online 2020 Nov 30. doi: 10.1038/s42003-020-01456-5

PMCID:: PMC7704666

Abstract Article PDF–1.3M

Select item 716608113.

Gene Regulatory and Expression Differences between Mouse and Pig Limb Buds Provide Insights into the Evolutionary Emergence of Artiodactyl Traits

Virginie Tissières, Florian Geier, Barbara Kessler, Eckhard Wolf, Rolf Zeller, Javier Lopez-Rios

Cell Rep. 2020 Apr 7; 31(1): 107490. Published online 2020 Apr 7. doi: 10.1016/j.celrep.2020.03.054

PMCID:: PMC7166081

Abstract Article

Select item 713210414.

Hox genes maintain critical roles in the adult skeleton

Jane Y. Song, Kyriel M. Pineault, Jesús M. Dones, Ronald T. Raines, Deneen M. Wellik

Proc Natl Acad Sci U S A. 2020 Mar 31; 117(13): 7296–7304. Published online 2020 Mar 13. doi: 10.1073/pnas.1920860117

PMCID:: PMC7132104

Abstract Article PDF–2.1M

Select item 696949715.

The formation of the thumb requires direct modulation of Gli3 transcription by Hoxa13

Maria Félix Bastida, Rocío Pérez-Gómez, Anna Trofka, Jianjian Zhu, Alvaro Rada-Iglesias, Rushikesh Sheth, H. Scott Stadler, Susan Mackem, Marian A. Ros

Proc Natl Acad Sci U S A. 2020 Jan 14; 117(2): 1090–1096. Published online 2020 Jan 2. doi: 10.1073/pnas.1919470117

PMCID:: PMC6969497

Abstract Article PDF–1.1M

Select item 672422116.

The emergent landscape of the mouse gut endoderm at single-cell resolution

Sonja Nowotschin, Manu Setty, Ying-Yi Kuo, Vincent Liu, Vidur Garg, Roshan Sharma, Claire S. Simon, Nestor Saiz, Rui Gardner, Stéphane C. Boutet, Deanna M. Church, Pamela A. Hoodless, Anna-Katerina Hadjantonakis, Dana Pe’er

Nature. Author manuscript; available in PMC 2019 Nov 1.

Published in final edited form as: Nature. 2019 May; 569(7756): 361–367. Published online 2019 Apr 8. doi: 10.1038/s41586-019-1127-1

PMCID:: PMC6724221

Abstract Article PDF–6.5M

Select item 667936717.

Bone morphology is regulated modularly by global and regional genetic programs

Shai Eyal, Shiri Kult, Sarah Rubin, Sharon Krief, Neta Felsenthal, Kyriel M. Pineault, Dena Leshkowitz, Tomer-Meir Salame, Yoseph Addadi, Deneen M. Wellik, Elazar Zelzer

Development. 2019 Jul 15; 146(14): dev167882. Published online 2019 Jul 26. doi: 10.1242/dev.167882

PMCID:: PMC6679367

Abstract Article

Select item 662636418.

Impact of genome architecture on the functional activation and repression of Hox regulatory landscapes

Eddie Rodríguez-Carballo, Lucille Lopez-Delisle, Nayuta Yakushiji-Kaminatsui, Asier Ullate-Agote, Denis Duboule

BMC Biol. 2019; 17: 55. Published online 2019 Jul 12. doi: 10.1186/s12915-019-0677-x

PMCID:: PMC6626364

Abstract Article PDF–1.9M

Select item 661314719.

The constrained architecture of mammalian Hox gene clusters

Fabrice Darbellay, Célia Bochaton, Lucille Lopez-Delisle, Bénédicte Mascrez, Patrick Tschopp, Saskia Delpretti, Jozsef Zakany, Denis Duboule

Proc Natl Acad Sci U S A. 2019 Jul 2; 116(27): 13424–13433. Published online 2019 Jun 17. doi: 10.1073/pnas.1904602116

PMCID:: PMC6613147

Abstract Article PDF–2.5M

Select item 628786620.

Transcription Factor 21 Is Required for Branching Morphogenesis and Regulates the Gdnf-Axis in Kidney Development

Shintaro Ide, Gal Finer, Yoshiro Maezawa, Tuncer Onay, Tomokazu Souma, Rizaldy Scott, Kana Ide, Yoshihiro Akimoto, Chengjin Li, Minghao Ye, Xiangmin Zhao, Yusuke Baba, Takuya Minamizuka, Jing Jin, Minoru Takemoto, Koutaro Yokote, Susan E. Quaggin

J Am Soc Nephrol. 2018 Dec; 29(12): 2795–2808. Published online 2018 Oct 30. doi: 10.1681/ASN.2017121278