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Items: 1 to 20 of 24

1.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
2.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
3.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
4.
The cellular economy of the Saccharomyces cerevisiae zinc proteome
Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide
Metallomics. Author manuscript; available in PMC 2019 Dec 12.
Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j
PMCID:
PMC6291366
AbstractArticlePDF–3.0M
5.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
6.
Functional Metabolomics Describes the Yeast Biosynthetic Regulome
Michael Mülleder, Enrica Calvani, Mohammad Tauqeer Alam, Richard Kangda Wang, Florian Eckerstorfer, Aleksej Zelezniak, Markus Ralser
Cell. 2016 Oct 6; 167(2): 553–565.e12. doi: 10.1016/j.cell.2016.09.007
PMCID:
PMC5055083
AbstractArticlePDF–3.9M
7.
One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Schütze, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner
Nat Methods. Author manuscript; available in PMC 2016 Sep 22.
Published in final edited form as: Nat Methods. 2016 Apr; 13(4): 371–378. Published online 2016 Feb 29. doi: 10.1038/nmeth.3795
PMCID:
PMC4869835
AbstractArticlePDF–2.7M
8.
An inter‐species protein–protein interaction network across vast evolutionary distance
Quan Zhong, Samuel J Pevzner, Tong Hao, Yang Wang, Roberto Mosca, Jörg Menche, Mikko Taipale, Murat Taşan, Changyu Fan, Xinping Yang, Patrick Haley, Ryan R Murray, Flora Mer, Fana Gebreab, Stanley Tam, Andrew MacWilliams, Amélie Dricot, Patrick Reichert, Balaji Santhanam, Lila Ghamsari, Michael A Calderwood, Thomas Rolland, Benoit Charloteaux, Susan Lindquist, Albert‐László Barabási, David E Hill, Patrick Aloy, Michael E Cusick, Yu Xia, Frederick P Roth, Marc Vidal
Mol Syst Biol. 2016 Apr; 12(4): 865. Published online 2016 Apr 23. doi: 10.15252/msb.20156484
PMCID:
PMC4848758
AbstractArticlePDF–2.1M
9.
The Canonical DHHC Motif Is Not Absolutely Required for the Activity of the Yeast S-acyltransferases Swf1 and Pfa4
Ayelén González Montoro, Sabrina Chumpen Ramirez, Javier Valdez Taubas
J Biol Chem. 2015 Sep 11; 290(37): 22448–22459. Published online 2015 Jul 29. doi: 10.1074/jbc.M115.651356
PMCID:
PMC4566221
AbstractArticlePDF–2.1M
10.
Genetic Basis for Saccharomyces cerevisiae Biofilm in Liquid Medium
Kaj Scherz Andersen, Rasmus Bojsen, Laura Gro Rejkjær Sørensen, Martin Weiss Nielsen, Michael Lisby, Anders Folkesson, Birgitte Regenberg
G3 (Bethesda) 2014 Sep; 4(9): 1671–1680. Published online 2014 Jul 9. doi: 10.1534/g3.114.010892
PMCID:
PMC4169159
AbstractArticlePDF–1.7M
11.
A yeast phenomic model for the gene interaction network modulating CFTR-ΔF508 protein biogenesis
Raymond J Louie, Jingyu Guo, John W Rodgers, Rick White, Najaf A Shah, Silvere Pagant, Peter Kim, Michael Livstone, Kara Dolinski, Brett A McKinney, Jeong Hong, Eric J Sorscher, Jennifer Bryan, Elizabeth A Miller, John L Hartman, IV
Genome Med. 2012; 4(12): 103. Published online 2012 Dec 27. doi: 10.1186/gm404
PMCID:
PMC3906889
AbstractArticlePDF–2.5M
12.
Analysis of substrate specificity of human DHHC protein acyltransferases using a yeast expression system
Yusuke Ohno, Atsushi Kashio, Ren Ogata, Akihiro Ishitomi, Yuki Yamazaki, Akio Kihara
Mol Biol Cell. 2012 Dec 1; 23(23): 4543–4551. doi: 10.1091/mbc.E12-05-0336
PMCID:
PMC3510016
AbstractArticlePDF–1.1M
13.
Specificity of Transmembrane Protein Palmitoylation in Yeast
Ayelén González Montoro, Sabrina Chumpen Ramirez, Rodrigo Quiroga, Javier Valdez Taubas
PLoS One. 2011; 6(2): e16969. Published online 2011 Feb 24. doi: 10.1371/journal.pone.0016969
PMCID:
PMC3044718
AbstractArticlePDF–839K
14.
Purification of Nuclear Poly(A)-binding Protein Nab2 Reveals Association with the Yeast Transcriptome and a Messenger Ribonucleoprotein Core Structure
Julien Batisse, Claire Batisse, Aidan Budd, Bettina Böttcher, Ed Hurt
J Biol Chem. 2009 Dec 11; 284(50): 34911–34917. Published online 2009 Oct 19. doi: 10.1074/jbc.M109.062034
PMCID:
PMC2787353
AbstractArticlePDF–3.8M
15.
Molecular Recognition of the Palmitoylation Substrate Vac8 by Its Palmitoyltransferase Pfa3
Marissa J. Nadolski, Maurine E. Linder
J Biol Chem. 2009 Jun 26; 284(26): 17720–17730. Published online 2009 May 5. doi: 10.1074/jbc.M109.005447
PMCID:
PMC2719411
AbstractArticlePDF–1.5M
16.
Whi3, a Developmental Regulator of Budding Yeast, Binds a Large Set of mRNAs Functionally Related to the Endoplasmic Reticulum
Neus Colomina, Francisco Ferrezuelo, Hongyin Wang, Martí Aldea, Eloi Garí
J Biol Chem. 2008 Oct 17; 283(42): 28670–28679. doi: 10.1074/jbc.M804604200
PMCID:
PMC2661415
AbstractArticlePDF–680K
17.
2-Bromopalmitate and 2-(2-hydroxy-5-nitro-benzylidene)-benzo[b]thiophen-3-one inhibit DHHC-mediated palmitoylation in vitro
Benjamin C. Jennings, Marissa J. Nadolski, Yiping Ling, Meredith Beckham Baker, Marietta L. Harrison, Robert J. Deschenes, Maurine E. Linder
J Lipid Res. 2009 Feb; 50(2): 233–242. doi: 10.1194/jlr.M800270-JLR200
PMCID:
PMC2636914
AbstractArticlePDF–743K
18.
Global Analysis of Protein Palmitoylation in Yeast
Amy F. Roth, Junmei Wan, Aaron O. Bailey, Beimeng Sun, Jason A. Kuchar, William N. Green, Brett S. Phinney, John R. Yates, III, Nicholas G. Davis
Cell. Author manuscript; available in PMC 2008 Feb 18.
Published in final edited form as: Cell. 2006 Jun 2; 125(5): 1003–1013. doi: 10.1016/j.cell.2006.03.042
PMCID:
PMC2246083
AbstractArticlePDF–1.7M
19.
The vacuolar DHHC-CRD protein Pfa3p is a protein acyltransferase for Vac8p
Jessica E. Smotrys, Marissa J. Schoenfish, Monica A. Stutz, Maurine E. Linder
J Cell Biol. 2005 Sep 26; 170(7): 1091–1099. doi: 10.1083/jcb.200507048
PMCID:
PMC2171546
AbstractArticlePDF–4.1M
20.
Purification and Characterization of Recombinant Protein Acyltransferases
Cheryl Budde, Marissa J. Schoenfish, Maurine E. Linder, Robert J. Deschenes
Methods. Author manuscript; available in PMC 2007 Jun 26.
Published in final edited form as: Methods. 2006 Oct; 40(2): 143–150. doi: 10.1016/j.ymeth.2006.07.017
PMCID:
PMC1899524
AbstractArticlePDF–571K

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