PMC Links for GEO Profiles (Select 9188304) - PMC

Pekka Jaako, Alexandre Faille, Shengjiang Tan, Chi C. Wong, Norberto Escudero-Urquijo, Pablo Castro-Hartmann, Penny Wright, Christine Hilcenko, David J. Adams, Alan J. Warren

Nat Commun. 2022; 13: 1562. Published online 2022 Mar 23. doi: 10.1038/s41467-022-29214-7

PMCID:: PMC8943182

Abstract Article PDF–3.0M

Select item 87638644.

Eukaryotic initiation factor 6 regulates mechanical responses in endothelial cells

Adam N. Keen, Luke A. Payne, Vedanta Mehta, Alistair Rice, Lisa J. Simpson, Kar Lai Pang, Armando del Rio Hernandez, John S. Reader, Ellie Tzima

J Cell Biol. 2022 Feb 7; 221(2): e202005213. Published online 2022 Jan 13. doi: 10.1083/jcb.202005213

PMCID:: PMC8763864

Abstract Article PDF–6.9M

Select item 83610225.

Targeting of eIF6-driven translation induces a metabolic rewiring that reduces NAFLD and the consequent evolution to hepatocellular carcinoma

Alessandra Scagliola, Annarita Miluzio, Gabriele Ventura, Stefania Oliveto, Chiara Cordiglieri, Nicola Manfrini, Delia Cirino, Sara Ricciardi, Luca Valenti, Guido Baselli, Roberta D’Ambrosio, Marco Maggioni, Daniela Brina, Alberto Bresciani, Stefano Biffo

Nat Commun. 2021; 12: 4878. Published online 2021 Aug 12. doi: 10.1038/s41467-021-25195-1

PMCID:: PMC8361022

Abstract Article PDF–9.4M

Select item 79387706.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 63334607.

ATG5 is required for B cell polarization and presentation of particulate antigens

Florent Arbogast, Johan Arnold, Philippe Hammann, Lauriane Kuhn, Johana Chicher, Diane Murera, Justine Weishaar, Sylviane Muller, Jean-Daniel Fauny, Frédéric Gros

Autophagy. 2019; 15(2): 280–294. Published online 2018 Sep 22. doi: 10.1080/15548627.2018.1516327

PMCID:: PMC6333460

Abstract Article PDF–2.7M

Select item 62441838.

Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells

Sunyuan Zhang, Nicholas A. Williamson, Marie A. Bogoyevitch

Sci Data. 2018; 5: 180262. Published online 2018 Nov 20. doi: 10.1038/sdata.2018.262

PMCID:: PMC6244183

Abstract Article PDF–753K

Select item 56959129.

The Role of Eif6 in Skeletal Muscle Homeostasis Revealed by Endurance Training Co-expression Networks

Kim Clarke, Sara Ricciardi, Tim Pearson, Izwan Bharudin, Peter K. Davidsen, Michela Bonomo, Daniela Brina, Alessandra Scagliola, Deborah M. Simpson, Robert J. Beynon, Farhat Khanim, John Ankers, Mark A. Sarzynski, Sujoy Ghosh, Addolorata Pisconti, Jan Rozman, Martin Hrabe de Angelis, Chris Bunce, Claire Stewart, Stuart Egginton, Mark Caddick, Malcolm Jackson, Claude Bouchard, Stefano Biffo, Francesco Falciani

Cell Rep. 2017 Nov 7; 21(6): 1507–1520. Published online 2017 Nov 7. doi: 10.1016/j.celrep.2017.10.040

PMCID:: PMC5695912

Abstract Article

Select item 566564310.

CHIP as a membrane-shuttling proteostasis sensor

Yannick Kopp, Wei-Han Lang, Tobias B Schuster, Adrián Martínez-Limón, Harald F Hofbauer, Robert Ernst, Giulia Calloni, R Martin Vabulas

eLife. 2017; 6: e29388. Published online 2017 Nov 1. doi: 10.7554/eLife.29388

PMCID:: PMC5665643

Abstract Article PDF–2.2M

Select item 559138911.

Data on the effects of eIF6 downmodulation on the proportions of innate and adaptive immune system cell subpopulations and on thymocyte maturation

Nicola Manfrini, Sara Ricciardi, Annarita Miluzio, Maya Fedeli, Alessandra Scagliola, Simone Gallo, Thure Adler, Dirk H. Busch, Valerie Gailus-Durner, Helmut Fuchs, Martin Hrabě de Angelis, Stefano Biffo

Data Brief. 2017 Oct; 14: 653–658. Published online 2017 Aug 30. doi: 10.1016/j.dib.2017.08.023

PMCID:: PMC5591389

Abstract Article PDF–390K

Select item 538122612.

Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function

Tingting Zhang, Wei Du, Andrew F. Wilson, Satoshi H. Namekawa, Paul R. Andreassen, Amom Ruhikanta Meetei, Qishen Pang

Sci Rep. 2017; 7: 45626. Published online 2017 Apr 5. doi: 10.1038/srep45626

PMCID:: PMC5381226

Abstract Article PDF–1.4M

Select item 509992513.

Involvement of eIF6 in external mechanical stretch–mediated murine dermal fibroblast function via TGF-β1 pathway

Qin Shu, Jianglin Tan, Van Daele Ulrike, Xiaorong Zhang, Jiacai Yang, Sisi Yang, Xiaohong Hu, Weifeng He, Gaoxing Luo, Jun Wu

Sci Rep. 2016; 6: 36075. Published online 2016 Nov 8. doi: 10.1038/srep36075

PMCID:: PMC5099925

Abstract Article PDF–2.7M

Select item 469194814.

Elf5-centered transcription factor hub controls trophoblast stem cell self-renewal and differentiation through stoichiometry-sensitive shifts in target gene networks

Paulina A. Latos, Arnold R. Sienerth, Alexander Murray, Claire E. Senner, Masanaga Muto, Masahito Ikawa, David Oxley, Sarah Burge, Brian J. Cox, Myriam Hemberger

Genes Dev. 2015 Dec 1; 29(23): 2435–2448. doi: 10.1101/gad.268821.115

PMCID:: PMC4691948

Abstract Article PDF–1.0M

Select item 459565715.

eIF6 coordinates insulin sensitivity and lipid metabolism by coupling translation to transcription

Daniela Brina, Annarita Miluzio, Sara Ricciardi, Kim Clarke, Peter K. Davidsen, Gabriella Viero, Toma Tebaldi, Nina Offenhäuser, Jan Rozman, Birgit Rathkolb, Susanne Neschen, Martin Klingenspor, Eckhard Wolf, Valerie Gailus-Durner, Helmut Fuchs, Martin Hrabe de Angelis, Alessandro Quattrone, Francesco Falciani, Stefano Biffo

Nat Commun. 2015; 6: 8261. Published online 2015 Sep 18. doi: 10.1038/ncomms9261

PMCID:: PMC4595657

Abstract Article PDF–2.5M

Select item 455775316.

Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis

Michal Mikula, Tymon Rubel, Jakub Karczmarski, Malgorzata Statkiewicz, Karol Bomsztyk, Jerzy Ostrowski

Proteome Sci. 2015; 13: 23. Published online 2015 Sep 2. doi: 10.1186/s12953-015-0079-0

PMCID:: PMC4557753

Abstract Article PDF–1.5M

Select item 407349417.

The Central Role of EED in the Orchestration of Polycomb Group Complexes

Qi Cao, Xiaoju Wang, Meng Zhao, Rendong Yang, Rohit Malik, Yuanyuan Qiao, Anton Poliakov, Anastasia K. Yocum, Yong Li, Wei Chen, Xuhong Cao, Xia Jiang, Arun Dahiya, Clair Harris, Felix Y. Feng, Sundeep Kalantry, Zhaohui S. Qin, Saravana M. Dhanasekaran, Arul M. Chinnaiyan

Nat Commun. Author manuscript; available in PMC 2014 Jul 24.

Published in final edited form as: Nat Commun. 2014; 5: 3127. doi: 10.1038/ncomms4127

PMCID:: PMC4073494

Abstract Article PDF–2.1M

Select item 317805918.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 309339519.

RAD21 Cooperates with Pluripotency Transcription Factors in the Maintenance of Embryonic Stem Cell Identity

Anja Nitzsche, Maciej Paszkowski-Rogacz, Filomena Matarese, Eva M. Janssen-Megens, Nina C. Hubner, Herbert Schulz, Ingrid de Vries, Li Ding, Norbert Huebner, Matthias Mann, Hendrik G. Stunnenberg, Frank Buchholz

PLoS One. 2011; 6(5): e19470. Published online 2011 May 12. doi: 10.1371/journal.pone.0019470

PMCID:: PMC3093395

Abstract Article PDF–1.0M

Select item 308402620.

Uncoupling of GTP hydrolysis from eIF6 release on the ribosome causes Shwachman-Diamond syndrome

Andrew J. Finch, Christine Hilcenko, Nicolas Basse, Lesley F. Drynan, Beatriz Goyenechea, Tobias F. Menne, África González Fernández, Paul Simpson, Clive S. D'Santos, Mark J. Arends, Jean Donadieu, Christine Bellanné-Chantelot, Michael Costanzo, Charles Boone, Andrew N. McKenzie, Stefan M.V. Freund, Alan J. Warren

Genes Dev. 2011 May 1; 25(9): 917–929. doi: 10.1101/gad.623011

PMCID:: PMC3084026

Abstract Article PDF–1.4M

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