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Select item 108987401.

Comparative exploration of mammalian deafness gene homologues in the Drosophila auditory organ shows genetic correlation between insect and vertebrate hearing

Daniel C. Sutton, Jonathan C. Andrews, Dylan M. Dolezal, Ye Jin Park, Hongjie Li, Daniel F. Eberl, Shinya Yamamoto, Andrew K. Groves

PLoS One. 2024; 19(2): e0297846. Published online 2024 Feb 27. doi: 10.1371/journal.pone.0297846

PMCID:: PMC10898740

Abstract Article PDF–2.8M

Select item 108162822.

The Lifespan of D. melanogaster Depends on the Function of the Gagr Gene, a Domesticated gag Gene of Drosophila LTR Retrotransposons

Yevgenia Balakireva, Maria Nikitina, Pavel Makhnovskii, Inna Kukushkina, Ilya Kuzmin, Alexander Kim, Lidia Nefedova

Insects. 2024 Jan; 15(1): 68. Published online 2024 Jan 17. doi: 10.3390/insects15010068

PMCID:: PMC10816282

Abstract Article PDF–4.1M

Select item 104107493.

Using single-cell RNA sequencing to generate predictive cell-type-specific split-GAL4 reagents throughout development

Yu-Chieh David Chen, Yen-Chung Chen, Raghuvanshi Rajesh, Nathalie Shoji, Maisha Jacy, Haluk Lacin, Ted Erclik, Claude Desplan

Proc Natl Acad Sci U S A. 2023 Aug 8; 120(32): e2307451120. Published online 2023 Jul 31. doi: 10.1073/pnas.2307451120

PMCID:: PMC10410749

Abstract Article PDF–4.8M

Select item 103357074.

A single-cell atlas of the sexually dimorphic Drosophila foreleg and its sensory organs during development

Ben R. Hopkins, Olga Barmina, Artyom Kopp

PLoS Biol. 2023 Jun; 21(6): e3002148. Published online 2023 Jun 28. doi: 10.1371/journal.pbio.3002148

PMCID:: PMC10335707

Abstract Article PDF–5.4M

Select item 101950805.

Origin of wiring specificity in an olfactory map revealed by neuron type–specific, time-lapse imaging of dendrite targeting

Kenneth Kin Lam Wong, Tongchao Li, Tian-Ming Fu, Gaoxiang Liu, Cheng Lyu, Sayeh Kohani, Qijing Xie, David J Luginbuhl, Srigokul Upadhyayula, Eric Betzig, Liqun Luo

eLife. 2023; 12: e85521. Published online 2023 Mar 28. doi: 10.7554/eLife.85521

PMCID:: PMC10195080

Abstract Article PDF–13M

Select item 101057366.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 96844907.

NetREX-CF integrates incomplete transcription factor data with gene expression to reconstruct gene regulatory networks

Yijie Wang, Hangnoh Lee, Justin M. Fear, Isabelle Berger, Brian Oliver, Teresa M. Przytycka

Commun Biol. 2022; 5: 1282. Published online 2022 Nov 23. doi: 10.1038/s42003-022-04226-7

PMCID:: PMC9684490

Abstract Article PDF–1.3M

Select item 96356448.

Enteric bacterial infection in Drosophila induces whole-body alterations in metabolic gene expression independently of the immune deficiency signaling pathway

Rujuta Deshpande, Byoungchun Lee, Savraj S Grewal

G3 (Bethesda) 2022 Nov; 12(11): jkac163. Published online 2022 Jul 4. doi: 10.1093/g3journal/jkac163

PMCID:: PMC9635644

Abstract Article PDF–2.2M

Select item 94046469.

A single-cell transcriptomic atlas of complete insect nervous systems across multiple life stages

Marc Corrales, Benjamin T. Cocanougher, Andrea B. Kohn, Jason D. Wittenbach, Xi S. Long, Andrew Lemire, Albert Cardona, Robert H. Singer, Leonid L. Moroz, Marta Zlatic

Neural Dev. 2022; 17: 8. Published online 2022 Aug 24. doi: 10.1186/s13064-022-00164-6

Correction in:: Neural Dev. 2022; 17: 11.

PMCID:: PMC9404646

Abstract Article PDF–4.1M

Select item 933649510.

Chromatin and transcriptomic profiling uncover dysregulation of the Tip60 HAT/HDAC2 epigenomic landscape in the neurodegenerative brain

Mariah Beaver, Bhanu Chandra Karisetty, Haolin Zhang, Akanksha Bhatnagar, Ellen Armour, Visha Parmar, Reshma Brown, Merry Xiang, Felice Elefant

Epigenetics. 2022; 17(7): 786–807. Published online 2021 Aug 9. doi: 10.1080/15592294.2021.1959742

PMCID:: PMC9336495

Abstract Article PDF–3.5M

Select item 930869311.

Transcription Factor Acj6 Controls Dendrite Targeting via A Combinatorial Cell-Surface Code

Qijing Xie, Jiefu Li, Hongjie Li, Namrata D Udeshi, Tanya Svinkina, Daniel Orlin, Sayeh Kohani, Ricardo Guajardo, DR Mani, Chuanyun Xu, Tongchao Li, Shuo Han, Wei Wei, S Andrew Shuster, David J Luginbuhl, Stephen R. Quake, Swetha E. Murthy, Alice Y Ting, Steven A Carr, Liqun Luo

Neuron. Author manuscript; available in PMC 2023 Jul 20.

Published in final edited form as: Neuron. 2022 Jul 20; 110(14): 2299–2314.e8. Published online 2022 May 24. doi: 10.1016/j.neuron.2022.04.026

PMCID:: PMC9308693

Abstract Article PDF–3.9M

Select item 850567812.

Constructing and Tuning Excitatory Cholinergic Synapses: The Multifaceted Functions of Nicotinic Acetylcholine Receptors in Drosophila Neural Development and Physiology

Justin S. Rosenthal, Quan Yuan

Front Cell Neurosci. 2021; 15: 720560. Published online 2021 Sep 28. doi: 10.3389/fncel.2021.720560

PMCID:: PMC8505678

Abstract Article PDF–3.1M

Select item 787014613.

Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila

Colleen N McLaughlin, Maria Brbić, Qijing Xie, Tongchao Li, Felix Horns, Sai Saroja Kolluru, Justus M Kebschull, David Vacek, Anthony Xie, Jiefu Li, Robert C Jones, Jure Leskovec, Stephen R Quake, Liqun Luo, Hongjie Li

eLife. 2021; 10: e63856. Published online 2021 Feb 8. doi: 10.7554/eLife.63856

PMCID:: PMC7870146

Abstract Article PDF–11M

Select item 787014514.

Temporal evolution of single-cell transcriptomes of Drosophila olfactory projection neurons

Qijing Xie, Maria Brbic, Felix Horns, Sai Saroja Kolluru, Robert C Jones, Jiefu Li, Anay R Reddy, Anthony Xie, Sayeh Kohani, Zhuoran Li, Colleen N McLaughlin, Tongchao Li, Chuanyun Xu, David Vacek, David J Luginbuhl, Jure Leskovec, Stephen R Quake, Liqun Luo, Hongjie Li

eLife. 2021; 10: e63450. Published online 2021 Jan 11. doi: 10.7554/eLife.63450

PMCID:: PMC7870145

Abstract Article PDF–13M

Select item 779085715.

Neuronal diversity and convergence in a visual system developmental atlas

Mehmet Neset Özel, Felix Simon, Shadi Jafari, Isabel Holguera, Yen-Chung Chen, Najate Benhra, Rana Naja El-Danaf, Katarina Kapuralin, Jennifer Amy Malin, Nikolaos Konstantinides, Claude Desplan

Nature. Author manuscript; available in PMC 2021 May 4.

Published in final edited form as: Nature. 2021 Jan; 589(7840): 88–95. Published online 2020 Nov 4. doi: 10.1038/s41586-020-2879-3

PMCID:: PMC7790857

Abstract Article PDF–12M

Select item 779057616.

Gene regulatory networks during the development of the Drosophila visual system

Yen-Chung Chen, Claude Desplan

Curr Top Dev Biol. Author manuscript; available in PMC 2021 Jan 7.

Published in final edited form as: Curr Top Dev Biol. 2020; 139: 89–125. Published online 2020 Apr 7. doi: 10.1016/bs.ctdb.2020.02.010

PMCID:: PMC7790576

Abstract Article PDF–1.2M

Select item 758814217.

NF-κB disinhibition contributes to dendrite defects in fly models of neurodegenerative diseases

Myeong Hoon Han, Min Jee Kwon, Byung Su Ko, Do Young Hyeon, Davin Lee, Hyung-Jun Kim, Daehee Hwang, Sung Bae Lee

J Cell Biol. 2020 Dec 7; 219(12): e202004107. Published online 2020 Oct 22. doi: 10.1083/jcb.202004107

PMCID:: PMC7588142

Abstract Article PDF–5.5M

Select item 728629418.

Dynamic neurotransmitter specific transcription factor expression profiles during Drosophila development

Alicia Estacio-Gómez, Amira Hassan, Emma Walmsley, Lily Wong Le, Tony D. Southall

Biol Open. 2020 May 15; 9(5): bio052928. Published online 2020 Jun 3. doi: 10.1242/bio.052928

PMCID:: PMC7286294

Abstract Article PDF–2.7M

Select item 723147919.

Single-cell Transcriptomes Reveal Diverse Regulatory Strategies for Olfactory Receptor Expression and Axon Targeting

Hongjie Li, Tongchao Li, Felix Horns, Jiefu Li, Qijing Xie, Chuanyun Xu, Bing Wu, Justus M. Kebschull, Colleen N. McLaughlin, Sai Saroja Kolluru, Robert C. Jones, David Vacek, Anthony Xie, David J. Luginbuhl, Stephen R. Quake, Liqun Luo

Curr Biol. Author manuscript; available in PMC 2021 Apr 6.

Published in final edited form as: Curr Biol. 2020 Apr 6; 30(7): 1189–1198.e5. Published online 2020 Feb 13. doi: 10.1016/j.cub.2020.01.049

PMCID:: PMC7231479

Abstract Article PDF–2.5M

Select item 717397420.

A single-cell transcriptomic atlas of the adult Drosophila ventral nerve cord

Aaron M Allen, Megan C Neville, Sebastian Birtles, Vincent Croset, Christoph Daniel Treiber, Scott Waddell, Stephen F Goodwin

eLife. 2020; 9: e54074. Published online 2020 Apr 21. doi: 10.7554/eLife.54074

PMCID:: PMC7173974

Abstract Article PDF–33M

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