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Items: 1 to 20 of 50

1.
A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast
Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger
G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296
PMCID:
PMC9836348
AbstractArticlePDF–857K
2.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
3.
Post-Transcriptional Control of Mating-Type Gene Expression during Gametogenesis in Saccharomyces cerevisiae
Randi Yeager, G. Guy Bushkin, Emily Singer, Rui Fu, Benjamin Cooperman, Michael McMurray
Biomolecules. 2021 Aug; 11(8): 1223. Published online 2021 Aug 17. doi: 10.3390/biom11081223
PMCID:
PMC8394074
AbstractArticlePDF–2.5M
4.
Mechanisms that ensure monogamous mating in Saccharomyces cerevisiae
Corrina G. Robertson, Manuella R. Clark-Cotton, Daniel J. Lew
Mol Biol Cell. 2021 Apr 15; 32(8): 638–644. doi: 10.1091/mbc.E20-12-0757
PMCID:
PMC8108519
AbstractArticlePDF–1.1M
5.
A Flow Cytometry-Based Phenotypic Screen To Identify Novel Endocytic Factors in Saccharomyces cerevisiae
Kristie Wrasman, Salvatore L. Alioto, Yorke Zhang, Kyle Hoban, Marjon Khairy, Bruce L. Goode, Beverly Wendland
G3 (Bethesda) 2018 May; 8(5): 1497–1512. Published online 2018 Mar 14. doi: 10.1534/g3.118.200102
PMCID:
PMC5940143
AbstractArticlePDF–2.3M
6.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
7.
Genetic dissection of early endosomal recycling highlights a TORC1-independent role for Rag GTPases
Chris MacDonald, Robert C. Piper
J Cell Biol. 2017 Oct 2; 216(10): 3275–3290. doi: 10.1083/jcb.201702177
PMCID:
PMC5626546
AbstractArticlePDF–2.7M
8.
Applications of pHluorin for Quantitative, Kinetic and High-throughput Analysis of Endocytosis in Budding Yeast
Derek C. Prosser, Kristie Wrasman, Thaddeus K. Woodard, Allyson F. O’Donnell, Beverly Wendland
J Vis Exp. 2016; (116): 54587. Published online 2016 Oct 23. doi: 10.3791/54587
PMCID:
PMC5092240
AbstractArticlePDF–1.0M
9.
Analysis of random PCR‐originated mutants of the yeast Ste2 and Ste3 receptors
Serena Gastaldi, Michela Zamboni, Giulia Bolasco, Gianfranco Di Segni, Glauco P. Tocchini‐Valentini
Microbiologyopen. 2016 Aug; 5(4): 670–686. Published online 2016 May 5. doi: 10.1002/mbo3.361
PMCID:
PMC4985600
AbstractArticlePDF–819K
10.
One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Schütze, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner
Nat Methods. Author manuscript; available in PMC 2016 Sep 22.
Published in final edited form as: Nat Methods. 2016 Apr; 13(4): 371–378. Published online 2016 Feb 29. doi: 10.1038/nmeth.3795
PMCID:
PMC4869835
AbstractArticlePDF–2.7M
11.
Protein-RNA networks revealed through covalent RNA marks
Christopher P. Lapointe, Daniel Wilinski, Harriet A. J. Saunders, Marvin Wickens
Nat Methods. Author manuscript; available in PMC 2016 May 18.
Published in final edited form as: Nat Methods. 2015 Dec; 12(12): 1163–1170. Published online 2015 Nov 2. doi: 10.1038/nmeth.3651
PMCID:
PMC4707952
AbstractArticlePDF–856K
12.
Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae
Mallory A Freeberg, Ting Han, James J Moresco, Andy Kong, Yu-Cheng Yang, Zhi John Lu, John R Yates, John K Kim
Genome Biol. 2013; 14(2): R13. Published online 2013 Feb 14. doi: 10.1186/gb-2013-14-2-r13
PMCID:
PMC4053964
AbstractArticlePDF–1.7M
13.
C2-Phytoceramide Perturbs Lipid Rafts and Cell Integrity in Saccharomyces cerevisiae in a Sterol-Dependent Manner
Andreia Pacheco, Flávio Azevedo, António Rego, Júlia Santos, Susana R. Chaves, Manuela Côrte-Real, Maria João Sousa
PLoS One. 2013; 8(9): e74240. Published online 2013 Sep 11. doi: 10.1371/journal.pone.0074240
PMCID:
PMC3770674
AbstractArticlePDF–1.0M
14.
Saccharomyces cerevisiae Genetics Predicts Candidate Therapeutic Genetic Interactions at the Mammalian Replication Fork
Derek M. van Pel, Peter C. Stirling, Sean W. Minaker, Payal Sipahimalani, Philip Hieter
G3 (Bethesda) 2013 Feb; 3(2): 273–282. Published online 2013 Feb 1. doi: 10.1534/g3.112.004754
PMCID:
PMC3564987
AbstractArticlePDF–2.3M
15.
Global Analysis of Yeast mRNPs
Sarah F. Mitchell, Saumya Jain, Meipei She, Roy Parker
Nat Struct Mol Biol. Author manuscript; available in PMC 2013 Jul 1.
Published in final edited form as: Nat Struct Mol Biol. 2013 Jan; 20(1): 127–133. Published online 2012 Dec 9. doi: 10.1038/nsmb.2468
PMCID:
PMC3537908
AbstractArticlePDF–1.2M
16.
Yeast pheromone receptor genes STE2 and STE3 are differently regulated at the transcription and polyadenylation level
Gianfranco Di Segni, Serena Gastaldi, Michela Zamboni, Glauco P. Tocchini-Valentini
Proc Natl Acad Sci U S A. 2011 Oct 11; 108(41): 17082–17086. Published online 2011 Oct 3. doi: 10.1073/pnas.1114648108
PMCID:
PMC3193217
AbstractArticlePDF–636K
17.
ASYMMETRY IN SEXUAL PHEROMONES IS NOT REQUIRED FOR ASCOMYCETE MATING
Joana Gonçalves-Sá, Andrew Murray
Curr Biol. Author manuscript; available in PMC 2012 Aug 23.
Published in final edited form as: Curr Biol. 2011 Aug 23; 21(16): 1337–1346. Published online 2011 Aug 11. doi: 10.1016/j.cub.2011.06.054
PMCID:
PMC3159855
AbstractArticlePDF–1.4M
18.
Defining potentially conserved RNA regulons of homologous zinc-finger RNA-binding proteins
Tanja Scherrer, Christian Femmer, Ralph Schiess, Ruedi Aebersold, André P Gerber
Genome Biol. 2011; 12(1): R3. Published online 2011 Jan 13. doi: 10.1186/gb-2011-12-1-r3
PMCID:
PMC3091301
AbstractArticlePDF–1.3M
19.
The Complete Spectrum of Yeast Chromosome Instability Genes Identifies Candidate CIN Cancer Genes and Functional Roles for ASTRA Complex Components
Peter C. Stirling, Michelle S. Bloom, Tejomayee Solanki-Patil, Stephanie Smith, Payal Sipahimalani, Zhijian Li, Megan Kofoed, Shay Ben-Aroya, Kyungjae Myung, Philip Hieter
PLoS Genet. 2011 Apr; 7(4): e1002057. Published online 2011 Apr 28. doi: 10.1371/journal.pgen.1002057
PMCID:
PMC3084213
AbstractArticlePDF–710K
20.
RiboSys, a high-resolution, quantitative approach to measure the in vivo kinetics of pre-mRNA splicing and 3′-end processing in Saccharomyces cerevisiae
Ross D. Alexander, J. David Barrass, Beatriz Dichtl, Martin Kos, Tomasz Obtulowicz, Marie-Cecile Robert, Michal Koper, Iwona Karkusiewicz, Luisa Mariconti, David Tollervey, Bernhard Dichtl, Joanna Kufel, Edouard Bertrand, Jean D. Beggs
RNA. 2010 Dec; 16(12): 2570–2580. doi: 10.1261/rna.2162610
PMCID:
PMC2995417
AbstractArticlePDF–949K

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