PMC Links for GEO Profiles (Select 93884965) - PMC

Result Filters

Links from GEO Profiles

Items: 1 to 20 of 40

<< First< Prev

Page of 2

Select item 115403151.

The epistatic relationship of Drosophila melanogaster CtIP and Rif1 in homology-directed repair of DNA double-strand breaks

Makenzie S Thomas, Gautham S Pillai, Margaret A Butler, Joel Fernandez, Jeannine R LaRocque

G3 (Bethesda) 2024 Nov; 14(11): jkae210. Published online 2024 Oct 14. doi: 10.1093/g3journal/jkae210

PMCID:: PMC11540315

Abstract Article PDF–945K

Select item 114086102.

Prevalent Fast Evolution of Genes Involved in Heterochromatin Functions

Leila Lin, Yuheng Huang, Jennifer McIntyre, Ching-Ho Chang, Serafin Colmenares, Yuh Chwen G Lee

Mol Biol Evol. 2024 Sep; 41(9): msae181. Published online 2024 Aug 27. doi: 10.1093/molbev/msae181

PMCID:: PMC11408610

Abstract Article PDF–1.6M

Select item 112274713.

Sustained inactivation of the Polycomb PRC1 complex induces DNA repair defects and genomic instability in epigenetic tumors

Chetan C. Rawal, Vincent Loubiere, Nadejda L. Butova, Juliette Gracia, Victoria Parreno, Chiara Merigliano, Anne-Marie Martinez, Giacomo Cavalli, Irene Chiolo

Histochem Cell Biol. 2024; 162(1-2): 133–147. Published online 2024 Jun 18. doi: 10.1007/s00418-024-02302-z

PMCID:: PMC11227471

Abstract Article PDF–2.7M

Select item 97360234.

A Spontaneous Inversion of the X Chromosome Heterochromatin Provides a Tool for Studying the Structure and Activity of the Nucleolus in Drosophila melanogaster

Tatyana D. Kolesnikova, Mikhail S. Klenov, Alina R. Nokhova, Sergey A. Lavrov, Galina V. Pokholkova, Veit Schubert, Svetlana V. Maltseva, Kevin R. Cook, Michael J. Dixon, Igor F. Zhimulev

Cells. 2022 Dec; 11(23): 3872. Published online 2022 Dec 1. doi: 10.3390/cells11233872

PMCID:: PMC9736023

Abstract Article PDF–4.2M

Select item 93364955.

Chromatin and transcriptomic profiling uncover dysregulation of the Tip60 HAT/HDAC2 epigenomic landscape in the neurodegenerative brain

Mariah Beaver, Bhanu Chandra Karisetty, Haolin Zhang, Akanksha Bhatnagar, Ellen Armour, Visha Parmar, Reshma Brown, Merry Xiang, Felice Elefant

Epigenetics. 2022; 17(7): 786–807. Published online 2021 Aug 9. doi: 10.1080/15592294.2021.1959742

PMCID:: PMC9336495

Abstract Article PDF–3.5M

Select item 92456806.

Temporal control of late replication and coordination of origin firing by self-stabilizing Rif1-PP1 hubs in Drosophila

Chun-Yi Cho, Charles A. Seller, Patrick H. O’Farrell

Proc Natl Acad Sci U S A. 2022 Jun 28; 119(26): e2200780119. Published online 2022 Jun 22. doi: 10.1073/pnas.2200780119

PMCID:: PMC9245680

Abstract Article PDF–1.9M

Select item 86160607.

The Organization of Pericentromeric Heterochromatin in Polytene Chromosome 3 of the Drosophilamelanogaster Line with the Rif1¹; SuUR^ES Su(var)3-9⁰⁶ Mutations Suppressing Underreplication

Tatyana Zykova, Mariya Maltseva, Fedor Goncharov, Lidia Boldyreva, Galina Pokholkova, Tatyana Kolesnikova, Igor Zhimulev

Cells. 2021 Nov; 10(11): 2809. Published online 2021 Oct 20. doi: 10.3390/cells10112809

PMCID:: PMC8616060

Abstract Article PDF–5.8M

Select item 85707838.

Replication timing analysis in polyploid cells reveals Rif1 uses multiple mechanisms to promote underreplication in Drosophila

Souradip Das, Madison Caballero, Tatyana Kolesnikova, Igor Zhimulev, Amnon Koren, Jared Nordman

Genetics. 2021 Nov; 219(3): iyab147. Published online 2021 Sep 13. doi: 10.1093/genetics/iyab147

PMCID:: PMC8570783

Abstract Article PDF–1.8M

Select item 73492789.

Effects of Mutations in the Drosophila melanogaster Rif1 Gene on the Replication and Underreplication of Pericentromeric Heterochromatin in Salivary Gland Polytene Chromosomes

Tatyana D. Kolesnikova, Alexandra V. Kolodyazhnaya, Galina V. Pokholkova, Veit Schubert, Viktoria V. Dovgan, Svetlana A. Romanenko, Dmitry Yu. Prokopov, Igor F. Zhimulev

Cells. 2020 Jun; 9(6): 1501. Published online 2020 Jun 19. doi: 10.3390/cells9061501

PMCID:: PMC7349278

Abstract Article PDF–13M

Select item 719827710.

Rif1 Functions in a Tissue-Specific Manner To Control Replication Timing Through Its PP1-Binding Motif

Robin L. Armstrong, Souradip Das, Christina A. Hill, Robert J. Duronio, Jared T. Nordman

Genetics. 2020 May; 215(1): 75–87. Published online 2020 Mar 6. doi: 10.1534/genetics.120.303155

PMCID:: PMC7198277

Abstract Article PDF–1.6M

Select item 696157811.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 692533512.

Asymmetric Histone Inheritance in Asymmetrically Dividing Stem Cells

Matthew Wooten, Rajesh Ranjan, Xin Chen

Trends Genet. Author manuscript; available in PMC 2021 Jan 1.

Published in final edited form as: Trends Genet. 2020 Jan; 36(1): 30–43. Published online 2019 Nov 18. doi: 10.1016/j.tig.2019.10.004

PMCID:: PMC6925335

Abstract Article PDF–1.1M

Select item 618510913.

Rif1 inhibits replication fork progression and controls DNA copy number in Drosophila

Alexander Munden, Zhan Rong, Amanda Sun, Rama Gangula, Simon Mallal, Jared T Nordman

eLife. 2018; 7: e39140. Published online 2018 Oct 2. doi: 10.7554/eLife.39140

PMCID:: PMC6185109

Abstract Article PDF–4.4M

Select item 596381714.

Rif1 prolongs the embryonic S phase at the Drosophila mid-blastula transition

Charles A. Seller, Patrick H. O’Farrell

PLoS Biol. 2018 May; 16(5): e2005687. Published online 2018 May 10. doi: 10.1371/journal.pbio.2005687

PMCID:: PMC5963817

Abstract Article PDF–29M

Select item 570780515.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900216.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 540616717.

Mobile-phone radiation-induced perturbation of gene-expression profiling, redox equilibrium and sporadic-apoptosis control in the ovary of Drosophila melanogaster

Areti K. Manta, Deppie Papadopoulou, Alexander P. Polyzos, Adamantia F. Fragopoulou, Aikaterini S. Skouroliakou, Dimitris Thanos, Dimitrios J. Stravopodis, Lukas H. Margaritis

Fly (Austin) 2017; 11(2): 75–95. Published online 2016 Dec 14. doi: 10.1080/19336934.2016.1270487

PMCID:: PMC5406167

Abstract Article PDF–1.4M

Select item 488965818.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 456802519.

Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions

Albert J. Erives

Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1

PMCID:: PMC4568025

Abstract Article PDF–2.8M

Select item 452833020.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937