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Items: 1 to 20 of 55

1.
Gle1 is required for tRNA to stimulate Dbp5 ATPase activity in vitro and promote Dbp5-mediated tRNA export in vivo in Saccharomyces cerevisiae
Arvind Arul Nambi Rajan, Ryuta Asada, Ben Montpetit
eLife. 2024; 12: RP89835. Published online 2024 Jan 8. doi: 10.7554/eLife.89835
PMCID:
PMC10945473
AbstractArticlePDF–4.3M
2.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
3.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
4.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
5.
The nucleoporin Gle1 activates DEAD-box protein 5 (Dbp5) by promoting ATP binding and accelerating rate limiting phosphate release
Shawn Gray, Wenxiang Cao, Ben Montpetit, Enrique M De La Cruz
Nucleic Acids Res. 2022 Apr 22; 50(7): 3998–4011. Published online 2022 Mar 14. doi: 10.1093/nar/gkac164
Correction in:
Nucleic Acids Res. 2022 Apr 22; 50(7): 4197.
PMCID:
PMC9023272
AbstractArticlePDF–1.4M
6.
Snx4-assisted vacuolar targeting of transcription factors defines a new autophagy pathway for controlling ATG expression
Sara E. Hanley, Stephen D. Willis, Katrina F. Cooper
Autophagy. 2021; 17(11): 3547–3565. Published online 2021 Mar 8. doi: 10.1080/15548627.2021.1877934
PMCID:
PMC8632336
AbstractArticlePDF–5.1M
7.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
8.
The deubiquitylase Ubp15 couples transcription to mRNA export
Fanny Eyboulet, Célia Jeronimo, Jacques Côté, François Robert
eLife. 2020; 9: e61264. Published online 2020 Nov 23. doi: 10.7554/eLife.61264
PMCID:
PMC7682988
AbstractArticlePDF–1.4M
9.
Altered rRNA processing disrupts nuclear RNA homeostasis via competition for the poly(A)-binding protein Nab2
Lisbeth-Carolina Aguilar, Biplab Paul, Taylor Reiter, Louis Gendron, Arvind Arul Nambi Rajan, Rachel Montpetit, Christian Trahan, Sebastian Pechmann, Marlene Oeffinger, Ben Montpetit
Nucleic Acids Res. 2020 Nov 18; 48(20): 11675–11694. Published online 2020 Nov 2. doi: 10.1093/nar/gkaa964
PMCID:
PMC7672433
AbstractArticlePDF–6.0M
10.
Dbp5 associates with RNA-bound Mex67 and Nab2 and its localization at the nuclear pore complex is sufficient for mRNP export and cell viability
Rebecca L. Adams, Susan R. Wente
PLoS Genet. 2020 Oct; 16(10): e1009033. Published online 2020 Oct 1. doi: 10.1371/journal.pgen.1009033
PMCID:
PMC7553267
AbstractArticlePDF–2.4M
11.
Skp, Cullin, F-box (SCF)-Met30 and SCF-Cdc4-Mediated Proteolysis of CENP-A Prevents Mislocalization of CENP-A for Chromosomal Stability in Budding Yeast
Wei-Chun Au, Tianyi Zhang, Prashant K. Mishra, Jessica R. Eisenstatt, Robert L. Walker, Josefina Ocampo, Anthony Dawson, Jack Warren, Michael Costanzo, Anastasia Baryshnikova, Karin Flick, David J. Clark, Paul S. Meltzer, Richard E. Baker, Chad Myers, Charles Boone, Peter Kaiser, Munira A. Basrai
PLoS Genet. 2020 Feb; 16(2): e1008597. Published online 2020 Feb 7. doi: 10.1371/journal.pgen.1008597
PMCID:
PMC7032732
AbstractArticlePDF–3.9M
12.
A nuclear role for the DEAD-box protein Dbp5 in tRNA export
Azra Lari, Arvind Arul Nambi Rajan, Rima Sandhu, Taylor Reiter, Rachel Montpetit, Barry P Young, Chris JR Loewen, Ben Montpetit
eLife. 2019; 8: e48410. Published online 2019 Aug 27. doi: 10.7554/eLife.48410
Correction in:
eLife. 2020; 9: e63264.
PMCID:
PMC6711706
AbstractArticlePDF–3.8M
13.
Mapping the native organization of the yeast nuclear pore complex using nuclear radial intensity measurements
Pascal Vallotton, Sasikumar Rajoo, Matthias Wojtynek, Evgeny Onischenko, Annemarie Kralt, Carina Patrizia Derrer, Karsten Weis
Proc Natl Acad Sci U S A. 2019 Jul 16; 116(29): 14606–14613. Published online 2019 Jul 1. doi: 10.1073/pnas.1903764116
PMCID:
PMC6642398
AbstractArticlePDF–1.6M
14.
Saccharomyces cerevisiae Gle2/Rae1 is involved in septin organization, essential for cell cycle progression
Gesa Zander, Wilfried Kramer, Anika Seel, Heike Krebber
Yeast. 2017 Nov; 34(11): 459–470. Published online 2017 Sep 28. doi: 10.1002/yea.3249
PMCID:
PMC6472880
AbstractArticlePDF–1.9M
15.
Mutations affecting spindle pole body and mitotic exit network function are synthetically lethal with a deletion of the nucleoporin NUP1 in S. cerevisiae
Nicola C. Harper, Nicole T. Al-Greene, Munira A. Basrai, Kenneth D. Belanger
Curr Genet. Author manuscript; available in PMC 2018 Dec 17.
Published in final edited form as: Curr Genet. 2008 Feb; 53(2): 95–105. Published online 2007 Dec 5. doi: 10.1007/s00294-007-0168-4
PMCID:
PMC6296230
AbstractArticlePDF–684K
16.
Identification of the Novel Nup188-brr7 Allele in a Screen for Cold-Sensitive mRNA Export Mutants in Saccharomyces cerevisiae
Anne de Bruyn Kops, Christine Guthrie
G3 (Bethesda) 2018 Sep; 8(9): 2991–3003. Published online 2018 Jul 18. doi: 10.1534/g3.118.200447
PMCID:
PMC6118305
AbstractArticlePDF–1.7M
17.
Integrative Structure and Functional Anatomy of a Nuclear Pore Complex
Seung Joong Kim, Javier Fernandez-Martinez, Ilona Nudelman, Yi Shi, Wenzhu Zhang, Barak Raveh, Thurston Herricks, Brian D. Slaughter, Joanna Hogan, Paula Upla, Ilan E. Chemmama, Riccardo Pellarin, Ignacia Echeverria, Manjunatha Shivaraju, Azraa S. Chaudhury, Junjie Wang, Rosemary Williams, Jay R. Unruh, Charles H. Greenberg, Erica Y. Jacobs, Zhiheng Yu, M. Jason de la Cruz, Roxana Mironska, David L. Stokes, John D. Aitchison, Martin F. Jarrold, Jennifer L. Gerton, Steven J. Ludtke, Christopher W. Akey, Brian T. Chait, Andrej Sali, Michael P. Rout
Nature. Author manuscript; available in PMC 2018 Sep 14.
Published in final edited form as: Nature. 2018 Mar 22; 555(7697): 475–482. Published online 2018 Mar 14. doi: 10.1038/nature26003
PMCID:
PMC6022767
AbstractArticlePDF–9.5M
18.
Structural and functional analysis of mRNA export regulation by the nuclear pore complex
Daniel H. Lin, Ana R. Correia, Sarah W. Cai, Ferdinand M. Huber, Claudia A. Jette, André Hoelz
Nat Commun. 2018; 9: 2319. Published online 2018 Jun 13. doi: 10.1038/s41467-018-04459-3
PMCID:
PMC5998080
AbstractArticlePDF–7.1M
19.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
20.
Nup42 and IP6 coordinate Gle1 stimulation of Dbp5/DDX19B for mRNA export in yeast and human cells
Rebecca L. Adams, Aaron C. Mason, Laura Glass, Aditi, Susan R. Wente
Traffic. Author manuscript; available in PMC 2018 Dec 1.
Published in final edited form as: Traffic. 2017 Dec; 18(12): 776–790. Published online 2017 Oct 16. doi: 10.1111/tra.12526
Correction in:
Traffic. 2018 Aug; 19(8): 650.
PMCID:
PMC5677552
AbstractArticlePDF–1.0M

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