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Items: 1 to 20 of 31

1.
Wg/Wnt1 and Erasp link ER stress to proapoptotic signaling in an autosomal dominant retinitis pigmentosa model
Jung-Eun Park, Jiyoun Lee, Soonhyuck Ok, Seunghee Byun, Eun-Ju Chang, Sung-Eun Yoon, Young-Joon Kim, Min-Ji Kang
Exp Mol Med. 2023 Jul; 55(7): 1544–1555. Published online 2023 Jul 18. doi: 10.1038/s12276-023-01044-7
PMCID:
PMC10394004
AbstractArticlePDF–3.8M
2.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
3.
What Are the Functional Roles of Piwi Proteins and piRNAs in Insects?
Dulce Santos, Min Feng, Anna Kolliopoulou, Clauvis N. T. Taning, Jingchen Sun, Luc Swevers
Insects. 2023 Feb; 14(2): 187. Published online 2023 Feb 14. doi: 10.3390/insects14020187
PMCID:
PMC9962485
AbstractArticlePDF–1.1M
4.
Drosophila as a Model System for Studying of the Evolution and Functional Specialization of the Y Chromosome
Alexei A. Kotov, Sergei S. Bazylev, Vladimir E. Adashev, Aleksei S. Shatskikh, Ludmila V. Olenina
Int J Mol Sci. 2022 Apr; 23(8): 4184. Published online 2022 Apr 10. doi: 10.3390/ijms23084184
PMCID:
PMC9031259
AbstractArticlePDF–1.5M
5.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
6.
piRNA-mediated gene regulation and adaptation to sex-specific transposon expression in D. melanogaster male germline
Peiwei Chen, Alexei A. Kotov, Baira K. Godneeva, Sergei S. Bazylev, Ludmila V. Olenina, Alexei A. Aravin
Genes Dev. 2021 Jun; 35(11-12): 914–935. doi: 10.1101/gad.345041.120
PMCID:
PMC8168559
AbstractArticlePDF–4.1M
7.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
8.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
9.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
10.
SUMO regulates the activity of Smoothened and Costal-2 in Drosophila Hedgehog signaling
Jie Zhang, Yajuan Liu, Kai Jiang, Jianhang Jia
Sci Rep. 2017; 7: 42749. Published online 2017 Feb 14. doi: 10.1038/srep42749
PMCID:
PMC5307382
AbstractArticlePDF–3.0M
11.
Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome
Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair
Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999
PMCID:
PMC4928047
AbstractArticlePDF–3.1M
12.
Streamlined discovery of cross-linked chromatin complexes and associated histone modifications by mass spectrometry
Barry M. Zee, Artyom A. Alekseyenko, Kyle A. McElroy, Mitzi I. Kuroda
Proc Natl Acad Sci U S A. 2016 Feb 16; 113(7): 1784–1789. Published online 2016 Feb 1. doi: 10.1073/pnas.1522750113
PMCID:
PMC4763777
AbstractArticlePDF–850K
13.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
14.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
15.
The Genetic Basis for Variation in Olfactory Behavior in Drosophila melanogaster
Gunjan H. Arya, Michael M. Magwire, Wen Huang, Yazmin L. Serrano-Negron, Trudy F.C. Mackay, Robert R.H. Anholt
Chem Senses. 2015 May; 40(4): 233–243. Published online 2015 Feb 15. doi: 10.1093/chemse/bjv001
PMCID:
PMC4398050
AbstractArticlePDF–8.9M
16.
Frequent Recent Origination of Brain Genes Shaped the Evolution of Foraging Behavior in Drosophila
Sidi Chen, Maria Spletter, Xiaochun Ni, Kevin White, Liqun Luo, Manyuan Long
Cell Rep. Author manuscript; available in PMC 2015 Apr 2.
Published in final edited form as: Cell Rep. 2012 Feb 23; 1(2): 118–132. Published online 2012 Feb 16. doi: 10.1016/j.celrep.2011.12.010
PMCID:
PMC4382513
AbstractArticlePDF–2.0M
17.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
18.
Heterochromatin-associated interactions of Drosophila HP1a with dADD1, HIPP1, and repetitive RNAs
Artyom A. Alekseyenko, Andrey A. Gorchakov, Barry M. Zee, Stephen M. Fuchs, Peter V. Kharchenko, Mitzi I. Kuroda
Genes Dev. 2014 Jul 1; 28(13): 1445–1460. doi: 10.1101/gad.241950.114
PMCID:
PMC4083088
AbstractArticlePDF–2.4M
19.
ChIP-mass spectrometry captures protein interactions and modified histones associated with dosage compensation in Drosophila
C. I. Wang, A. A. Alekseyenko, G. LeRoy, A. E. H. Elia, A. A. Gorchakov, L-M. P. Britton, S. J. Elledge, P. V. Kharchenko, B. A. Garcia, M. I. Kuroda
Nat Struct Mol Biol. Author manuscript; available in PMC 2013 Aug 1.
Published in final edited form as: Nat Struct Mol Biol. 2013 Feb; 20(2): 202–209. Published online 2013 Jan 6. doi: 10.1038/nsmb.2477
PMCID:
PMC3674866
AbstractArticlePDF–1.9M
20.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M

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