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Items: 1 to 20 of 32

1.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
2.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
3.
The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions
Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman
Mol Cell. Author manuscript; available in PMC 2024 Jun 15.
Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021
PMCID:
PMC10297700
AbstractArticlePDF–2.0M
4.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
5.
A Multi-Perspective Proximity View on the Dynamic Head Region of the Ribosomal 40S Subunit
Kerstin Schmitt, Alina-Andrea Kraft, Oliver Valerius
Int J Mol Sci. 2021 Nov; 22(21): 11653. Published online 2021 Oct 28. doi: 10.3390/ijms222111653
PMCID:
PMC8583833
AbstractArticlePDF–4.2M
6.
Fe-S coordination defects in the replicative DNA polymerase delta cause deleterious DNA replication in vivo and subsequent DNA damage in the yeast Saccharomyces cerevisiae
Roland Chanet, Dorothée Baïlle, Marie-Pierre Golinelli-Cohen, Sylvie Riquier, Olivier Guittet, Michel Lepoivre, Meng-Er Huang, Laurence Vernis
G3 (Bethesda) 2021 Jul; 11(7): jkab124. Published online 2021 May 1. doi: 10.1093/g3journal/jkab124
PMCID:
PMC8495945
AbstractArticlePDF–732K
7.
AP‐3 vesicle uncoating occurs after HOPS‐dependent vacuole tethering
Jannis Schoppe, Muriel Mari, Erdal Yavavli, Kathrin Auffarth, Margarita Cabrera, Stefan Walter, Florian Fröhlich, Christian Ungermann
EMBO J. 2020 Oct 15; 39(20): e105117. Published online 2020 Aug 25. doi: 10.15252/embj.2020105117
PMCID:
PMC7560216
AbstractArticlePDF–3.6M
8.
Mitochondria export sulfur species required for cytosolic tRNA thiolation
Alok Pandey, Jayashree Pain, Nathaniel Dziuba, Ashutosh K. Pandey, Andrew Dancis, Paul A. Lindahl, Debkumar Pain
Cell Chem Biol. Author manuscript; available in PMC 2019 Jun 21.
Published in final edited form as: Cell Chem Biol. 2018 Jun 21; 25(6): 738–748.e3. Published online 2018 Apr 26. doi: 10.1016/j.chembiol.2018.04.002
PMCID:
PMC6014917
AbstractArticlePDF–1.2M
9.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
10.
The diferric-tyrosyl radical cluster of ribonucleotide reductase and cytosolic iron-sulfur clusters have distinct and similar biogenesis requirements
Haoran Li, Martin Stümpfig, Caiguo Zhang, Xiuxiang An, JoAnne Stubbe, Roland Lill, Mingxia Huang
J Biol Chem. 2017 Jul 7; 292(27): 11445–11451. Published online 2017 May 17. doi: 10.1074/jbc.M117.786178
PMCID:
PMC5500809
AbstractArticlePDF–1.3M
11.
EPR studies of wild type and mutant Dre2 identify essential [2Fe–-2S] and [4Fe–-4S] clusters and their cysteine ligands
Yan Zhang, Chunyu Yang, Andrew Dancis, Eiko Nakamaru-Ogiso
J Biochem. 2017 Jan; 161(1): 67–78. Published online 2016 Sep 26. doi: 10.1093/jb/mvw054
PMCID:
PMC5209584
AbstractArticlePDF–1.0M
12.
A novel translational control mechanism involving RNA structures within coding sequences
Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez
Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116
Correction in:
Genome Res. 2017 Apr; 27(4): 663.
PMCID:
PMC5204348
AbstractArticlePDF–1.3M
13.
DNA replication inhibitor hydroxyurea alters Fe-S centers by producing reactive oxygen species in vivo
Meng-Er Huang, Céline Facca, Zakaria Fatmi, Dorothée Baïlle, Safia Bénakli, Laurence Vernis
Sci Rep. 2016; 6: 29361. Published online 2016 Jul 11. doi: 10.1038/srep29361
PMCID:
PMC4942693
AbstractArticlePDF–1.4M
14.
The Hsp70 homolog Ssb and the 14-3-3 protein Bmh1 jointly regulate transcription of glucose repressed genes in Saccharomyces cerevisiae
Volker Hübscher, Kaivalya Mudholkar, Marco Chiabudini, Edith Fitzke, Tina Wölfle, Dietmar Pfeifer, Friedel Drepper, Bettina Warscheid, Sabine Rospert
Nucleic Acids Res. 2016 Jul 8; 44(12): 5629–5645. Published online 2016 Mar 21. doi: 10.1093/nar/gkw168
PMCID:
PMC4937304
AbstractArticlePDF–8.3M
15.
Systematic humanization of yeast genes reveals conserved functions and genetic modularity
Aashiq H. Kachroo, Jon M. Laurent, Christopher M. Yellman, Austin G. Meyer, Claus O. Wilke, Edward M. Marcotte
Science. Author manuscript; available in PMC 2016 Jan 20.
Published in final edited form as: Science. 2015 May 22; 348(6237): 921–925. doi: 10.1126/science.aaa0769
PMCID:
PMC4718922
AbstractArticlePDF–2.0M
16.
Target selection by natural and redesigned PUF proteins
Douglas F. Porter, Yvonne Y. Koh, Brett VanVeller, Ronald T. Raines, Marvin Wickens
Proc Natl Acad Sci U S A. 2015 Dec 29; 112(52): 15868–15873. Published online 2015 Dec 14. doi: 10.1073/pnas.1508501112
PMCID:
PMC4703012
AbstractArticlePDF–1.3M
17.
The deca-GX3 proteins Yae1-Lto1 function as adaptors recruiting the ABC protein Rli1 for iron-sulfur cluster insertion
Viktoria Désirée Paul, Ulrich Mühlenhoff, Martin Stümpfig, Jan Seebacher, Karl G Kugler, Christian Renicke, Christof Taxis, Anne-Claude Gavin, Antonio J Pierik, Roland Lill
eLife. 2015; 4: e08231. Published online 2015 Jul 16. doi: 10.7554/eLife.08231
PMCID:
PMC4523923
AbstractArticlePDF–3.8M
18.
Toward a Comprehensive Temperature-Sensitive Mutant Repository of the Essential Genes of Saccharomyces cerevisiae
Shay Ben-Aroya, Candice Coombes, Teresa Kwok, Kathryn A. O’Donnell, Jef D. Boeke, Philip Hieter
Mol Cell. Author manuscript; available in PMC 2014 Aug 12.
Published in final edited form as: Mol Cell. 2008 Apr 25; 30(2): 248–258. doi: 10.1016/j.molcel.2008.02.021
PMCID:
PMC4130347
AbstractArticlePDF–952K
19.
Conserved electron donor complex Dre2–Tah18 is required for ribonucleotide reductase metallocofactor assembly and DNA synthesis
Yan Zhang, Haoran Li, Caiguo Zhang, Xiuxiang An, Lili Liu, JoAnne Stubbe, Mingxia Huang
Proc Natl Acad Sci U S A. 2014 Apr 29; 111(17): E1695–E1704. Published online 2014 Apr 14. doi: 10.1073/pnas.1405204111
PMCID:
PMC4035922
AbstractArticlePDF–1.8M
20.
Ubiquitin Ligase Trapping Identifies an SCFSaf1 Pathway Targeting Unprocessed Vacuolar/Lysosomal Proteins
Kevin G. Mark, Marco Simonetta, Alessio Maiolica, Charles A. Seller, David P. Toczyski
Mol Cell. Author manuscript; available in PMC 2015 Jan 9.
Published in final edited form as: Mol Cell. 2014 Jan 9; 53(1): 148–161. Published online 2014 Jan 2. doi: 10.1016/j.molcel.2013.12.003
PMCID:
PMC4032118
AbstractArticlePDF–1.4M

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