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Select item 107772951.

The central regulatory circuit in the gene network controlling the morphogenesis of Drosophila mechanoreceptors: an in silico analysis

T.A. Bukharina, V.P. Golubyatnikov, D.P. Furman

Vavilovskii Zhurnal Genet Selektsii. 2023 Dec; 27(7): 746–754. doi: 10.18699/VJGB-23-87

PMCID:: PMC10777295

Abstract Article PDF–638K

Select item 106591622.

MIGGRI: A multi-instance graph neural network model for inferring gene regulatory networks for Drosophila from spatial expression images

Yuyang Huang, Gufeng Yu, Yang Yang

PLoS Comput Biol. 2023 Nov; 19(11): e1011623. Published online 2023 Nov 8. doi: 10.1371/journal.pcbi.1011623

PMCID:: PMC10659162

Abstract Article PDF–2.4M

Select item 86644863.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 79249984.

E3 ubiquitin ligase-mediated regulation of vertebrate ocular development; new insights into the function of SIAH enzymes

Warlen Pereira Piedade, Jakub K. Famulski

Biochem Soc Trans. 2021 Feb 26; 49(1): 327–340. Published online 2021 Feb 22. doi: 10.1042/BST20200613

PMCID:: PMC7924998

Abstract Article PDF–2.2M

Select item 74632945.

Polymorphism and Divergence of Novel Gene Expression Patterns in Drosophila melanogaster

Julie M. Cridland, Alex C. Majane, Hayley K. Sheehy, David J. Begun

Genetics. 2020 Sep; 216(1): 79–93. Published online 2020 Jul 31. doi: 10.1534/genetics.120.303515

PMCID:: PMC7463294

Abstract Article PDF–1011K

Select item 74632886.

The Classic Lobe Eye Phenotype of Drosophila Is Caused by Transposon Insertion-Induced Misexpression of a Zinc-Finger Transcription Factor

Wonseok Son, Kwang-Wook Choi

Genetics. 2020 Sep; 216(1): 117–134. Published online 2020 Jul 7. doi: 10.1534/genetics.120.303486

PMCID:: PMC7463288

Abstract Article PDF–2.7M

Select item 67265127.

The Role of Sevenless in Drosophila R7 Photoreceptor Specification

Andrew Tomlinson, Yannis Emmanuel Mavromatakis, Ronald Arias

Dev Biol. Author manuscript; available in PMC 2020 Oct 15.

Published in final edited form as: Dev Biol. 2019 Oct 15; 454(2): 181–189. Published online 2019 Jun 14. doi: 10.1016/j.ydbio.2019.06.007

PMCID:: PMC6726512

Abstract Article PDF–3.6M

Select item 63985018.

SOD1 activity threshold and TOR signalling modulate VAP(P58S) aggregation via reactive oxygen species-induced proteasomal degradation in a Drosophila model of amyotrophic lateral sclerosis

Kriti Chaplot, Lokesh Pimpale, Balaji Ramalingam, Senthilkumar Deivasigamani, Siddhesh S. Kamat, Girish S. Ratnaparkhi

Dis Model Mech. 2019 Feb 1; 12(2): dmm033803. Published online 2019 Feb 7. doi: 10.1242/dmm.033803

PMCID:: PMC6398501

Abstract Article

Select item 59638669.

The mir-279/996 cluster represses receptor tyrosine kinase signaling to determine cell fates in the Drosophila eye

Hong Duan, Luis F. de Navas, Fuqu Hu, Kailiang Sun, Yannis E. Mavromatakis, Kayla Viets, Cyrus Zhou, Joshua Kavaler, Robert J. Johnston, Andrew Tomlinson, Eric C. Lai

Development. 2018 Apr 1; 145(7): dev159053. Published online 2018 Apr 9. doi: 10.1242/dev.159053

PMCID:: PMC5963866

Abstract Article

Select item 576891810.

A Phyllopod-Mediated Feedback Loop Promotes Intestinal Stem Cell Enteroendocrine Commitment in Drosophila

Chang Yin, Rongwen Xi

Stem Cell Reports. 2018 Jan 9; 10(1): 43–57. Published online 2017 Dec 21. doi: 10.1016/j.stemcr.2017.11.014

PMCID:: PMC5768918

Abstract Article PDF–5.4M

Select item 570780511.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900212.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 555227413.

Parsimony and complexity: Cell fate assignment in the developing Drosophila eye

Yannis Emmanuel Mavromatakis, Andrew Tomlinson

Fly (Austin) 2017; 11(3): 171–178. Published online 2017 Feb 6. doi: 10.1080/19336934.2017.1291103

PMCID:: PMC5552274

Abstract Article PDF–487K

Select item 497891914.

Phenotypes Associated with Second Chromosome P Element Insertions in Drosophila melanogaster

Lily Kahsai, Gillian H. Millburn, Kevin R. Cook

G3 (Bethesda) 2016 Aug; 6(8): 2665–2670. Published online 2016 Jun 10. doi: 10.1534/g3.116.030940

PMCID:: PMC4978919

Abstract Article PDF–613K

Select item 494881615.

R7 Photoreceptor Specification in the Developing Drosophila Eye: The Role of the Transcription Factor Deadpan

Yannis Emmanuel Mavromatakis, Andrew Tomlinson

PLoS Genet. 2016 Jul; 12(7): e1006159. Published online 2016 Jul 18. doi: 10.1371/journal.pgen.1006159

PMCID:: PMC4948816

Abstract Article PDF–28M

Select item 488965816.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 478811417.

Unique and Overlapping Functions of Formins Frl and DAAM During Ommatidial Rotation and Neuronal Development in Drosophila

Gretchen Dollar, Rita Gombos, Austen A. Barnett, David Sanchez Hernandez, Saw M. T. Maung, Jozsef Mihály, Andreas Jenny

Genetics. 2016 Mar; 202(3): 1135–1151. Published online 2016 Jan 20. doi: 10.1534/genetics.115.181438

PMCID:: PMC4788114

Abstract Article PDF–4.5M

Select item 452833018.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832919.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 451821320.

LK6/Mnk2a is a new kinase of alpha synuclein phosphorylation mediating neurodegeneration

Shiqing Zhang, Jiang Xie, Ying Xia, Shu Yu, Zhili Gu, Ruili Feng, Guanghong Luo, Dong Wang, Kai Wang, Meng Jiang, Xiao Cheng, Hai Huang, Wu Zhang, Tieqiao Wen

Sci Rep. 2015; 5: 12564. Published online 2015 Jul 29. doi: 10.1038/srep12564