PMC Links for GEO Profiles (Select 97171467) - PMC

William W Fisher, Ann S Hammonds, Richard Weiszmann, Benjamin W Booth, Louis Gevirtzman, Jaeda E J Patton, Connor A Kubo, Robert H Waterston, Susan E Celniker

Genetics. 2023 Apr; 223(4): iyad004. Published online 2023 Jan 19. doi: 10.1093/genetics/iyad004

PMCID:: PMC10078917

Abstract Article PDF–18M

Select item 99387004.

From temporal patterning to neuronal connectivity in Drosophila type I neuroblast lineages

Heather Q Pollington, Austin Q Seroka, Chris Q Doe

Semin Cell Dev Biol. Author manuscript; available in PMC 2023 Jun 1.

Published in final edited form as: Semin Cell Dev Biol. 2023 Jun; 142: 4–12. Published online 2022 May 31. doi: 10.1016/j.semcdb.2022.05.022

PMCID:: PMC9938700

Abstract Article PDF–345K

Select item 90742565.

A complete temporal transcription factor series in the fly visual system

Nikolaos Konstantinides, Isabel Holguera, Anthony M. Rossi, Aristides Escobar, Liébaut Dudragne, Yen-Chung Chen, Thinh Tran, Azalia Martinez Jaimes, Mehmet Neset Özel, Félix Simon, Zhiping Shao, Nadejda M. Tsankova, John F. Fullard, Uwe Walldorf, Panos Roussos, Claude Desplan

Nature. Author manuscript; available in PMC 2022 Oct 6.

Published in final edited form as: Nature. 2022 Apr; 604(7905): 316–322. Published online 2022 Apr 6. doi: 10.1038/s41586-022-04564-w

PMCID:: PMC9074256

Abstract Article PDF–5.5M

Select item 83907716.

Identification of genes contributing to a long circadian period in Drosophila melanogaster

Shailesh Kumar, Ilker Tunc, Terry R. Tansey, Mehdi Pirooznia, Susan T. Harbison

J Biol Rhythms. Author manuscript; available in PMC 2021 Aug 27.

Published in final edited form as: J Biol Rhythms. 2021 Jun; 36(3): 239–253. Published online 2020 Dec 4. doi: 10.1177/0748730420975946

PMCID:: PMC8390771

Abstract Article PDF–2.4M

Select item 83458637.

Homothorax controls a binary Rhodopsin switch in Drosophila ocelli

Abhishek Kumar Mishra, Cornelia Fritsch, Roumen Voutev, Richard S. Mann, Simon G. Sprecher

PLoS Genet. 2021 Jul; 17(7): e1009460. Published online 2021 Jul 27. doi: 10.1371/journal.pgen.1009460

PMCID:: PMC8345863

Abstract Article PDF–3.3M

Select item 81392878.

The molecular landscape of neural differentiation in the developing Drosophila brain revealed by targeted scRNA-seq and multi-informatic analysis

Nigel S. Michki, Ye Li, Kayvon Sanjasaz, Yimeng Zhao, Fred Y. Shen, Logan A. Walker, Wenjia Cao, Cheng-Yu Lee, Dawen Cai

Cell Rep. Author manuscript; available in PMC 2021 May 21.

Published in final edited form as: Cell Rep. 2021 Apr 27; 35(4): 109039. doi: 10.1016/j.celrep.2021.109039

PMCID:: PMC8139287

Abstract Article PDF–1.6M

Select item 78376989.

A transcriptomic taxonomy of Drosophila circadian neurons around the clock

Dingbang Ma, Dariusz Przybylski, Katharine C Abruzzi, Matthias Schlichting, Qunlong Li, Xi Long, Michael Rosbash

eLife. 2021; 10: e63056. Published online 2021 Jan 13. doi: 10.7554/eLife.63056

PMCID:: PMC7837698

Abstract Article PDF–3.2M

Select item 737727910.

Temporal progression of Drosophila medulla neuroblasts generates the transcription factor combination to control T1 neuron morphogenesis

Vamsikrishna G. Naidu, Yu Zhang, Scott Lowe, Alokananda Ray, Hailun Zhu, Xin Li

Dev Biol. Author manuscript; available in PMC 2021 Aug 1.

Published in final edited form as: Dev Biol. 2020 Aug 1; 464(1): 35–44. Published online 2020 May 20. doi: 10.1016/j.ydbio.2020.05.005

PMCID:: PMC7377279

Abstract Article PDF–3.2M

Select item 728629411.

Dynamic neurotransmitter specific transcription factor expression profiles during Drosophila development

Alicia Estacio-Gómez, Amira Hassan, Emma Walmsley, Lily Wong Le, Tony D. Southall

Biol Open. 2020 May 15; 9(5): bio052928. Published online 2020 Jun 3. doi: 10.1242/bio.052928

PMCID:: PMC7286294

Abstract Article PDF–2.7M

Select item 703497912.

A genetic, genomic, and computational resource for exploring neural circuit function

Fred P Davis, Aljoscha Nern, Serge Picard, Michael B Reiser, Gerald M Rubin, Sean R Eddy, Gilbert L Henry

eLife. 2020; 9: e50901. Published online 2020 Jan 15. doi: 10.7554/eLife.50901

PMCID:: PMC7034979

Abstract Article PDF–6.7M

Select item 696157813.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 648595614.

A Comprehensive Drosophila melanogaster Transcription Factor Interactome

Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk

Cell Rep. Author manuscript; available in PMC 2019 Apr 26.

Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071

PMCID:: PMC6485956

Abstract Article PDF–1.6M

Select item 614702115.

Comparative Transcriptomics in Two Extreme Neopterans Reveals General Trends in the Evolution of Modern Insects

Guillem Ylla, Maria-Dolors Piulachs, Xavier Belles

iScience. 2018 Jun 29; 4: 164–179. Published online 2018 May 28. doi: 10.1016/j.isci.2018.05.017

PMCID:: PMC6147021

Abstract Article PDF–13M

Select item 568900216.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 535214517.

The genetic basis for variation in resistance to infection in the Drosophila melanogaster genetic reference panel

Jonathan B. Wang, Hsiao-Ling Lu, Raymond J. St. Leger

PLoS Pathog. 2017 Mar; 13(3): e1006260. Published online 2017 Mar 3. doi: 10.1371/journal.ppat.1006260

PMCID:: PMC5352145

Abstract Article PDF–2.9M

Select item 532863218.

α-amanitin resistance in Drosophila melanogaster: A genome-wide association approach

Chelsea L. Mitchell, Catrina E. Latuszek, Kara R. Vogel, Ian M. Greenlund, Rebecca E. Hobmeier, Olivia K. Ingram, Shannon R. Dufek, Jared L. Pecore, Felicia R. Nip, Zachary J. Johnson, Xiaohui Ji, Hairong Wei, Oliver Gailing, Thomas Werner

PLoS One. 2017; 12(2): e0173162. Published online 2017 Feb 27. doi: 10.1371/journal.pone.0173162

PMCID:: PMC5328632

Abstract Article PDF–1.6M

Select item 456859019.

Extensive identification and analysis of conserved small ORFs in animals

Sebastian D. Mackowiak, Henrik Zauber, Chris Bielow, Denise Thiel, Kamila Kutz, Lorenzo Calviello, Guido Mastrobuoni, Nikolaus Rajewsky, Stefan Kempa, Matthias Selbach, Benedikt Obermayer

Genome Biol. 2015; 16: 179. Published online 2015 Sep 14. doi: 10.1186/s13059-015-0742-x

PMCID:: PMC4568590

Abstract Article PDF–1.6M

Select item 452833020.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937