PMC Links for GEO Profiles (Select 97177459) - PMC

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 79921874.

Epigenetic Regulation of Drosophila Germline Stem Cell Maintenance and Differentiation

Velinda Vidaurre, Xin Chen

Dev Biol. Author manuscript; available in PMC 2022 May 1.

Published in final edited form as: Dev Biol. 2021 May; 473: 105–118. Published online 2021 Feb 18. doi: 10.1016/j.ydbio.2021.02.003

PMCID:: PMC7992187

Abstract Article PDF–1.0M

Select item 78917735.

Ush regulates hemocyte-specific gene expression, fatty acid metabolism and cell cycle progression and cooperates with dNuRD to orchestrate hematopoiesis

Jonathan Lenz, Robert Liefke, Julianne Funk, Samuel Shoup, Andrea Nist, Thorsten Stiewe, Robert Schulz, Yumiko Tokusumi, Lea Albert, Hartmann Raifer, Klaus Förstemann, Olalla Vázquez, Tsuyoshi Tokusumi, Nancy Fossett, Alexander Brehm

PLoS Genet. 2021 Feb; 17(2): e1009318. Published online 2021 Feb 18. doi: 10.1371/journal.pgen.1009318

PMCID:: PMC7891773

Abstract Article PDF–3.3M

Select item 78515966.

Genomics of Recombination Rate Variation in Temperature-Evolved Drosophila melanogaster Populations

Ari Winbush, Nadia D Singh

Genome Biol Evol. 2021 Jan; 13(1): evaa252. Published online 2020 Nov 28. doi: 10.1093/gbe/evaa252

PMCID:: PMC7851596

Abstract Article PDF–778K

Select item 72726117.

The Mi-2 nucleosome remodeler and the Rpd3 histone deacetylase are involved in piRNA-guided heterochromatin formation

Bruno Mugat, Simon Nicot, Carolina Varela-Chavez, Christophe Jourdan, Kaoru Sato, Eugenia Basyuk, François Juge, Mikiko C. Siomi, Alain Pélisson, Séverine Chambeyron

Nat Commun. 2020; 11: 2818. Published online 2020 Jun 4. doi: 10.1038/s41467-020-16635-5

PMCID:: PMC7272611

Abstract Article PDF–1.1M

Select item 72298268.

Release of promoter–proximal paused Pol II in response to histone deacetylase inhibition

Roshan Vaid, Jiayu Wen, Mattias Mannervik

Nucleic Acids Res. 2020 May 21; 48(9): 4877–4890. Published online 2020 Apr 16. doi: 10.1093/nar/gkaa234

PMCID:: PMC7229826

Abstract Article PDF–5.1M

Select item 71457119.

Localization of Drosophila CENP-A to non-centromeric sites depends on the NuRD complex

Engin Demirdizen, Matthias Spiller-Becker, Arion Förtsch, Alexander Wilhelm, Samuel Corless, Debora Bade, Andrea Bergner, Bernd Hessling, Sylvia Erhardt

Nucleic Acids Res. 2019 Dec 16; 47(22): 11589–11608. Published online 2019 Nov 12. doi: 10.1093/nar/gkz962

PMCID:: PMC7145711

Abstract Article PDF–6.3M

Select item 714408210.

Genetic Networks Underlying Natural Variation in Basal and Induced Activity Levels in Drosophila melanogaster

Louis P. Watanabe, Cameron Gordon, Mina Y. Momeni, Nicole C. Riddle

G3 (Bethesda) 2020 Apr; 10(4): 1247–1260. Published online 2020 Feb 3. doi: 10.1534/g3.119.401034

PMCID:: PMC7144082

Abstract Article PDF–2.0M

Select item 689320711.

An Atlas of Transcription Factors Expressed in Male Pupal Terminalia of Drosophila melanogaster

Ben J. Vincent, Gavin R. Rice, Gabriella M. Wong, William J. Glassford, Kayla I. Downs, Jessica L. Shastay, Kenechukwu Charles-Obi, Malini Natarajan, Madelaine Gogol, Julia Zeitlinger, Mark Rebeiz

G3 (Bethesda) 2019 Dec; 9(12): 3961–3972. Published online 2019 Oct 16. doi: 10.1534/g3.119.400788

PMCID:: PMC6893207

Abstract Article PDF–2.1M

Select item 650097912.

SWI/SNF chromatin remodeling controls Notch‐responsive enhancer accessibility

Zoe Pillidge, Sarah J Bray

EMBO Rep. 2019 May; 20(5): e46944. Published online 2019 Mar 26. doi: 10.15252/embr.201846944

PMCID:: PMC6500979

Abstract Article PDF–1.6M

Select item 648595613.

A Comprehensive Drosophila melanogaster Transcription Factor Interactome

Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk

Cell Rep. Author manuscript; available in PMC 2019 Apr 26.

Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071

PMCID:: PMC6485956

Abstract Article PDF–1.6M

Select item 637909014.

Mi-2/NuRD complex protects stem cell progeny from mitogenic Notch signaling

Evanthia Zacharioudaki, Julia Falo Sanjuan, Sarah Bray

eLife. 2019; 8: e41637. Published online 2019 Jan 29. doi: 10.7554/eLife.41637

PMCID:: PMC6379090

Abstract Article PDF–4.7M

Select item 608506815.

Ras-ERK-ETS inhibition alleviates neuronal mitochondrial dysfunction by reprogramming mitochondrial retrograde signaling

Olivia F. Duncan, Lucy Granat, Ramya Ranganathan, Vandana K. Singh, David Mazaud, Manolis Fanto, David Chambers, Clive G. Ballard, Joseph M. Bateman

PLoS Genet. 2018 Jul; 14(7): e1007567. Published online 2018 Jul 30. doi: 10.1371/journal.pgen.1007567

PMCID:: PMC6085068

Abstract Article PDF–21M

Select item 570780516.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900217.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 502578218.

Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster

Hirokazu Okada, H. Alexander Ebhardt, Sibylle Chantal Vonesch, Ruedi Aebersold, Ernst Hafen

Nat Commun. 2016; 7: 12649. Published online 2016 Sep 1. doi: 10.1038/ncomms12649

PMCID:: PMC5025782

Abstract Article PDF–2.2M

Select item 498149719.

The composition and organization of Drosophila heterochromatin are heterogeneous and dynamic

Joel M Swenson, Serafin U Colmenares, Amy R Strom, Sylvain V Costes, Gary H Karpen

eLife. 2016; 5: e16096. Published online 2016 Aug 11. doi: 10.7554/eLife.16096

PMCID:: PMC4981497

Abstract Article PDF–4.8M

Select item 494283820.

The Nucleosome Remodeling and Deacetylase Complex NuRD Is Built from Preformed Catalytically Active Sub-modules

W. Zhang, A. Aubert, J.M. Gomez de Segura, M. Karuppasamy, S. Basu, A.S. Murthy, A. Diamante, T.A. Drury, J. Balmer, J. Cramard, A.A. Watson, D. Lando, S.F. Lee, M. Palayret, S.L. Kloet, A.H. Smits, M.J. Deery, M. Vermeulen, B. Hendrich, D. Klenerman, C. Schaffitzel, I. Berger, E.D. Laue

J Mol Biol. 2016 Jul 17; 428(14): 2931–2942. doi: 10.1016/j.jmb.2016.04.025