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Select item 105756291.

Chromatin and gene expression changes during female Drosophila germline stem cell development illuminate the biology of highly potent stem cells

Liang-Yu Pang, Steven DeLuca, Haolong Zhu, John M Urban, Allan C Spradling

eLife. 2023; 12: RP90509. Published online 2023 Oct 13. doi: 10.7554/eLife.90509

PMCID:: PMC10575629

Abstract Article PDF–6.3M

Select item 77580512.

Autocrine insulin pathway signaling regulates actin dynamics in cell wound repair

Mitsutoshi Nakamura, Jeffrey M. Verboon, Tessa E. Allen, Maria Teresa Abreu-Blanco, Raymond Liu, Andrew N. M. Dominguez, Jeffrey J. Delrow, Susan M. Parkhurst

PLoS Genet. 2020 Dec; 16(12): e1009186. Published online 2020 Dec 11. doi: 10.1371/journal.pgen.1009186

PMCID:: PMC7758051

Abstract Article PDF–9.7M

Select item 69615783.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 62225764.

Signatures of Insecticide Selection in the Genome of Drosophila melanogaster

David Duneau, Haina Sun, Jonathan Revah, Keri San Miguel, Henry D. Kunerth, Ian V. Caldas, Philipp W. Messer, Jeffrey G. Scott, Nicolas Buchon

G3 (Bethesda) 2018 Nov; 8(11): 3469–3480. Published online 2018 Sep 6. doi: 10.1534/g3.118.200537

PMCID:: PMC6222576

Abstract Article PDF–1.5M

Select item 57078055.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890026.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 45283307.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 45283298.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 44239129.

Parallel Gene Expression Differences between Low and High Latitude Populations of Drosophila melanogaster and D. simulans

Li Zhao, Janneke Wit, Nicolas Svetec, David J. Begun

PLoS Genet. 2015 May; 11(5): e1005184. Published online 2015 May 7. doi: 10.1371/journal.pgen.1005184

PMCID:: PMC4423912

Abstract Article PDF–933K

Select item 435288710.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 423254511.

Whole-Genome Expression Analysis in the Third Instar Larval Midgut of Drosophila melanogaster

Thomas W. R. Harrop, Stephen L. Pearce, Phillip J. Daborn, Philip Batterham

G3 (Bethesda) 2014 Nov; 4(11): 2197–2205. Published online 2014 Sep 5. doi: 10.1534/g3.114.013870

PMCID:: PMC4232545

Abstract Article PDF–1.6M

Select item 422420412.

The Drosophila surface glia transcriptome: evolutionary conserved blood-brain barrier processes

Michael K. DeSalvo, Samantha J. Hindle, Zeid M. Rusan, Souvinh Orng, Mark Eddison, Kyle Halliwill, Roland J. Bainton

Front Neurosci. 2014; 8: 346. Published online 2014 Nov 7. doi: 10.3389/fnins.2014.00346

PMCID:: PMC4224204

Abstract Article PDF–5.0M

Select item 414319713.

A Set of Structural Features Defines the Cis-Regulatory Modules of Antenna-Expressed Genes in Drosophila melanogaster

Yosvany López, Alexis Vandenbon, Kenta Nakai

PLoS One. 2014; 9(8): e104342. Published online 2014 Aug 25. doi: 10.1371/journal.pone.0104342

PMCID:: PMC4143197

Abstract Article PDF–1.1M

Select item 409705414.

Transcriptional Regionalization of the Fruit Fly’s Airway Epithelium

Muhammad N. Faisal, Julia Hoffmann, Samar El-Kholy, Kimberley Kallsen, Christina Wagner, Iris Bruchhaus, Christine Fink, Thomas Roeder

PLoS One. 2014; 9(7): e102534. Published online 2014 Jul 14. doi: 10.1371/journal.pone.0102534

PMCID:: PMC4097054

Abstract Article PDF–638K

Select item 405384815.

Global regulation of mRNA translation and stability in the early Drosophila embryo by the Smaug RNA-binding protein

Linan Chen, Jason G Dumelie, Xiao Li, Matthew HK Cheng, Zhiyong Yang, John D Laver, Najeeb U Siddiqui, J Timothy Westwood, Quaid Morris, Howard D Lipshitz, Craig A Smibert

Genome Biol. 2014; 15(1): R4. Published online 2014 Jan 7. doi: 10.1186/gb-2014-15-1-r4

PMCID:: PMC4053848

Abstract Article PDF–2.7M

Select item 392531816.

Feminization of pheromone-sensing neurons affects mating decisions in Drosophila males

Beika Lu, Kathleen M. Zelle, Raya Seltzer, Abraham Hefetz, Yehuda Ben-Shahar

Biol Open. 2014 Feb 15; 3(2): 152–160. Published online 2014 Jan 17. doi: 10.1242/bio.20147369

PMCID:: PMC3925318

Abstract Article PDF–435K

Select item 358412417.

Identification of Genetic Modifiers of TDP-43 Neurotoxicity in Drosophila

Lihong Zhan, Keith A. Hanson, Sang Hwa Kim, Apeksha Tare, Randal S. Tibbetts

PLoS One. 2013; 8(2): e57214. Published online 2013 Feb 27. doi: 10.1371/journal.pone.0057214

PMCID:: PMC3584124

Abstract Article PDF–2.1M

Select item 353067718.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946719.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

Select item 304044120.

A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene

G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Nov 12.

Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047

PMCID:: PMC3040441

Abstract Article PDF–2.0M

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