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Items: 1 to 20 of 28

1.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
2.
DBP7 and YRF1-6 Are Involved in Cell Sensitivity to LiCl by Regulating the Translation of PGM2 mRNA
Sasi Kumar Jagadeesan, Mustafa Al-gafari, Jiashu Wang, Sarah Takallou, Danielle Allard, Maryam Hajikarimlou, Thomas David Daniel Kazmirchuk, Houman Moteshareie, Kamaledin B. Said, Reza Nokhbeh, Myron Smith, Bahram Samanfar, Ashkan Golshani
Int J Mol Sci. 2023 Jan; 24(2): 1785. Published online 2023 Jan 16. doi: 10.3390/ijms24021785
PMCID:
PMC9864399
AbstractArticlePDF–3.4M
3.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
4.
AMPK Phosphorylation Is Controlled by Glucose Transport Rate in a PKA-Independent Manner
Riccardo Milanesi, Farida Tripodi, Jacopo Vertemara, Renata Tisi, Paola Coccetti
Int J Mol Sci. 2021 Sep; 22(17): 9483. Published online 2021 Aug 31. doi: 10.3390/ijms22179483
PMCID:
PMC8431435
AbstractArticlePDF–1.6M
5.
Msn2/4 transcription factors positively regulate expression of Atg39 ER-phagy receptor
Tomoaki Mizuno, Kenji Irie
Sci Rep. 2021; 11: 11919. Published online 2021 Jun 7. doi: 10.1038/s41598-021-91480-0
PMCID:
PMC8184937
AbstractArticlePDF–2.5M
6.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
7.
Simulating Extracellular Glucose Signals Enhances Xylose Metabolism in Recombinant Saccharomyces cerevisiae
Meiling Wu, Hongxing Li, Shan Wei, Hongyu Wu, Xianwei Wu, Xiaoming Bao, Jin Hou, Weifeng Liu, Yu Shen
Microorganisms. 2020 Jan; 8(1): 100. Published online 2020 Jan 10. doi: 10.3390/microorganisms8010100
PMCID:
PMC7022881
AbstractArticlePDF–1.8M
8.
Caloric restriction controls stationary phase survival through Protein Kinase A (PKA) and cytosolic pH
Laura Dolz‐Edo, Margaretha van der Deen, Stanley Brul, Gertien Jacoba Smits
Aging Cell. 2019 Jun; 18(3): e12921. Published online 2019 Feb 20. doi: 10.1111/acel.12921
PMCID:
PMC6516148
AbstractArticlePDF–795K
9.
The cellular economy of the Saccharomyces cerevisiae zinc proteome
Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide
Metallomics. Author manuscript; available in PMC 2019 Dec 12.
Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j
PMCID:
PMC6291366
AbstractArticlePDF–3.0M
10.
Divergent Roles for cAMP–PKA Signaling in the Regulation of Filamentous Growth in Saccharomyces cerevisiae and Saccharomyces bayanus
Ömur Kayikci, Paul M. Magwene
G3 (Bethesda) 2018 Nov; 8(11): 3529–3538. Published online 2018 Sep 12. doi: 10.1534/g3.118.200413
PMCID:
PMC6222581
AbstractArticlePDF–1.4M
11.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
12.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
13.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
14.
A Functional Link Between Bir1 and the Saccharomyces cerevisiae Ctf19 Kinetochore Complex Revealed Through Quantitative Fitness Analysis
Vasso Makrantoni, Adam Ciesiolka, Conor Lawless, Josefin Fernius, Adele Marston, David Lydall, Michael J. R. Stark
G3 (Bethesda) 2017 Sep; 7(9): 3203–3215. Published online 2017 Jul 28. doi: 10.1534/g3.117.300089
PMCID:
PMC5592945
AbstractArticlePDF–1.7M
15.
A novel connection between the Cell Wall Integrity and the PKA pathways regulates cell wall stress response in yeast
Raúl García, Enrique Bravo, Sonia Diez-Muñiz, Cesar Nombela, Jose M. Rodríguez-Peña, Javier Arroyo
Sci Rep. 2017; 7: 5703. Published online 2017 Jul 18. doi: 10.1038/s41598-017-06001-9
PMCID:
PMC5515849
AbstractArticlePDF–3.4M
16.
Dual Specificity and Novel Structural Folding of Yeast Phosphodiesterase-1 for Hydrolysis of Second Messengers Cyclic Adenosine and Guanosine 3′,5′-Monophosphate
Yuanyuan Tian, Wenjun Cui, Manna Huang, Howard Robinson, Yiqian Wan, Yousheng Wang, Hengming Ke
Biochemistry. 2014 Aug 5; 53(30): 4938–4945. Published online 2014 Jul 9. doi: 10.1021/bi500406h
PMCID:
PMC4144708
AbstractArticlePDF–4.4M
17.
Maintenance of Mitochondrial Morphology by Autophagy and Its Role in High Glucose Effects on Chronological Lifespan of Saccharomyces cerevisiae
May T. Aung-Htut, Yuen T. Lam, Yu-Leng Lim, Mark Rinnerthaler, Cristy L. Gelling, Hongyuan Yang, Michael Breitenbach, Ian W. Dawes
Oxid Med Cell Longev. 2013; 2013: 636287. Published online 2013 Jul 11. doi: 10.1155/2013/636287
PMCID:
PMC3727090
AbstractArticlePDF–2.5M
18.
Repression of class I transcription by cadmium is mediated by the protein phosphatase 2A
Lei Zhou, Gwenaëlle Le Roux, Cécile Ducrot, Stéphane Chédin, Jean Labarre, Michel Riva, Christophe Carles
Nucleic Acids Res. 2013 Jul; 41(12): 6087–6097. Published online 2013 May 2. doi: 10.1093/nar/gkt335
PMCID:
PMC3695495
AbstractArticlePDF–574K
19.
La-motif–dependent mRNA association with Slf1 promotes copper detoxification in yeast
Luca Schenk, Dominik M. Meinel, Katja Strässer, André P. Gerber
RNA. 2012 Mar; 18(3): 449–461. doi: 10.1261/rna.028506.111
PMCID:
PMC3285933
AbstractArticlePDF–812K
20.
The role of the protein kinase A pathway in the response to alkaline pH stress in yeast
Carlos Casado, Asier González, Maria Platara, Amparo Ruiz, Joaquín Ariño
Biochem J. 2011 Sep 15; 438(Pt 3): 523–533. Prepublished online 2011 Jul 13. Published online 2011 Aug 26. doi: 10.1042/BJ20110607
PMCID:
PMC3253439
AbstractArticlePDF–706K

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