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Items: 1 to 20 of 119

1.
An APEX2-based proximity-dependent biotinylation assay with temporal specificity to study protein interactions during autophagy in the yeast Saccharomyces cerevisiae
Yasmina Filali-Mouncef, Alexandre Leytens, Prado Vargas Duarte, Mattia Zampieri, Jörn Dengjel, Fulvio Reggiori
Autophagy. 2024; 20(10): 2323–2337. Published online 2024 Jul 3. doi: 10.1080/15548627.2024.2366749
PMCID:
PMC11423678
AbstractArticlePDF–1.7M
2.
Requirement of Rab5 GTPase during heat stress-induced endocytosis in yeast
Makoto Nagano, Hiroki Shimamura, Junko Y. Toshima, Jiro Toshima
J Biol Chem. 2024 Aug; 300(8): 107553. Published online 2024 Jul 11. doi: 10.1016/j.jbc.2024.107553
PMCID:
PMC11345375
AbstractArticlePDF–3.7M
3.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
4.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
5.
Vtc4 Promotes the Entry of Phagophores into Vacuoles in the Saccharomyces cerevisiae Snf7 Mutant Cell
Xiaofan Chen, Yongheng Liang
J Fungi (Basel) 2023 Oct; 9(10): 1003. Published online 2023 Oct 11. doi: 10.3390/jof9101003
PMCID:
PMC10607680
AbstractArticlePDF–1.4M
6.
Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability
Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai
Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108
PMCID:
PMC10551700
AbstractArticlePDF–3.7M
7.
The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions
Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman
Mol Cell. Author manuscript; available in PMC 2024 Jun 15.
Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021
PMCID:
PMC10297700
AbstractArticlePDF–2.0M
8.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
9.
Exploring the consequences of redirecting an exocytic Rab onto endocytic vesicles
Xia Li, Dongmei Liu, Eric Griffis, Peter Novick
Mol Biol Cell. 2023 May 1; 34(5): ar38. Published online 2023 Apr 11. doi: 10.1091/mbc.E23-01-0037
PMCID:
PMC10162416
AbstractArticlePDF–9.3M
10.
Network Analysis Reveals the Molecular Bases of Statin Pleiotropy That Vary with Genetic Background
Cintya E. del Rio Hernandez, Lani J. Campbell, Paul H. Atkinson, Andrew B. Munkacsi
Microbiol Spectr. 2023 Mar-Apr; 11(2): e04148-22. Published online 2023 Mar 22. doi: 10.1128/spectrum.04148-22
PMCID:
PMC10100750
AbstractArticlePDF–6.1M
11.
The VINE complex is an endosomal VPS9-domain GEF and SNX-BAR coat
Shawn P Shortill, Mia S Frier, Ponthakorn Wongsangaroonsri, Michael Davey, Elizabeth Conibear
eLife. 2022; 11: e77035. Published online 2022 Aug 8. doi: 10.7554/eLife.77035
PMCID:
PMC9507130
AbstractArticlePDF–6.1M
12.
Vps21 Directs the PI3K-PI(3)P-Atg21-Atg16 Module to Phagophores via Vps8 for Autophagy
Lei Zhao, Weiming You, Dan Sun, Hui Xu, Xia You, Haiqian Xu, Zulin Wu, Zhiping Xie, Yongheng Liang
Int J Mol Sci. 2022 Sep; 23(17): 9550. Published online 2022 Aug 23. doi: 10.3390/ijms23179550
PMCID:
PMC9455592
AbstractArticlePDF–7.2M
13.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
14.
The peroxisomal exportomer directly inhibits phosphoactivation of the pexophagy receptor Atg36 to suppress pexophagy in yeast
Houqing Yu, Roarke A Kamber, Vladimir Denic
eLife. 2022; 11: e74531. Published online 2022 Apr 11. doi: 10.7554/eLife.74531
PMCID:
PMC9000956
AbstractArticlePDF–1.0M
15.
Subunit exchange among endolysosomal tethering complexes is linked to contact site formation at the vacuole
Ayelén González Montoro, Prado Vargas Duarte, Kathrin Auffarth, Stefan Walter, Florian Fröhlich, Christian Ungermann
Mol Biol Cell. 2021 Dec 1; 32(22): br14. doi: 10.1091/mbc.E21-05-0227
PMCID:
PMC8694092
AbstractArticlePDF–1.3M
16.
Tubulin isotypes optimize distinct spindle positioning mechanisms during yeast mitosis
Emmanuel T. Nsamba, Abesh Bera, Michael Costanzo, Charles Boone, Mohan L. Gupta, Jr.
J Cell Biol. 2021 Dec 6; 220(12): e202010155. Published online 2021 Nov 5. doi: 10.1083/jcb.202010155
PMCID:
PMC8576917
AbstractArticlePDF–7.4M
17.
Ist2 recruits the lipid transporters Osh6/7 to ER–PM contacts to maintain phospholipid metabolism
Andrew King On Wong, Barry Paul Young, Christopher J.R. Loewen
J Cell Biol. 2021 Sep 6; 220(9): e201910161. Published online 2021 Jul 14. doi: 10.1083/jcb.201910161
PMCID:
PMC8282664
AbstractArticlePDF–7.6M
18.
Genetically encoded multimode reporter of adaptor protein 3 (AP-3) traffic in budding yeast
Rachael L. Plemel, Greg Odorizzi, Alexey J. Merz
Traffic. Author manuscript; available in PMC 2021 Jul 6.
Published in final edited form as: Traffic. 2021 Jan; 22(1-2): 38–44. Published online 2020 Dec 7. doi: 10.1111/tra.12772
PMCID:
PMC8259613
AbstractArticlePDF–1.8M
19.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
20.
A conserved and regulated mechanism drives endosomal Rab transition
Lars Langemeyer, Ann-Christin Borchers, Eric Herrmann, Nadia Füllbrunn, Yaping Han, Angela Perz, Kathrin Auffarth, Daniel Kümmel, Christian Ungermann
eLife. 2020; 9: e56090. Published online 2020 May 11. doi: 10.7554/eLife.56090
PMCID:
PMC7239660
AbstractArticlePDF–4.4M

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