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Items: 1 to 20 of 67

1.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
2.
Adaptive preservation of orphan ribosomal proteins in chaperone-dispersed condensates
Asif Ali, Rania Garde, Olivia C. Schaffer, Jared A. M. Bard, Kabir Husain, Samantha Keyport Kik, Kathleen A. Davis, Sofia Luengo-Woods, Maya G. Igarashi, D. Allan Drummond, Allison H. Squires, David Pincus
Nat Cell Biol. Author manuscript; available in PMC 2024 Feb 15.
Published in final edited form as: Nat Cell Biol. 2023 Nov; 25(11): 1691–1703. Published online 2023 Oct 16. doi: 10.1038/s41556-023-01253-2
PMCID:
PMC10868727
AbstractArticlePDF–7.0M
3.
Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking
Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan
J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047
PMCID:
PMC10798858
AbstractArticlePDF–6.4M
4.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
5.
eIF2A represses cell wall biogenesis gene expression in Saccharomyces cerevisiae
Laura Meyer, Baptiste Courtin, Maïté Gomard, Abdelkader Namane, Emmanuelle Permal, Gwenael Badis, Alain Jacquier, Micheline Fromont-Racine
PLoS One. 2023; 18(11): e0293228. Published online 2023 Nov 27. doi: 10.1371/journal.pone.0293228
PMCID:
PMC10681259
AbstractArticlePDF–2.5M
6.
ISW1a modulates cohesin distribution in centromeric and pericentromeric regions
Ireneusz Litwin, Małgorzata Nowicka, Katarzyna Markowska, Ewa Maciaszczyk-Dziubińska, Paulina Tomaszewska, Robert Wysocki, Karol Kramarz
Nucleic Acids Res. 2023 Sep 22; 51(17): 9101–9121. Published online 2023 Jul 24. doi: 10.1093/nar/gkad612
PMCID:
PMC10516642
AbstractArticlePDF–2.8M
7.
Nuclear pore complexes mediate subtelomeric gene silencing by regulating PCNA levels on chromatin
Sanjeev Kumar Choudhry, Maxwell L. Neal, Song Li, Arti T. Navare, Trevor Van Eeuwen, Richard W. Wozniak, Fred D. Mast, Michael P. Rout, John D. Aitchison
J Cell Biol. 2023 Sep 4; 222(9): e202207060. Published online 2023 Jun 26. doi: 10.1083/jcb.202207060
PMCID:
PMC10292210
AbstractArticlePDF–5.9M
8.
In vitro structural maturation of an early stage pre-40S particle coupled with U3 snoRNA release and central pseudoknot formation
Jingdong Cheng, Giuseppe La Venuta, Benjamin Lau, Otto Berninghausen, Roland Beckmann, Ed Hurt
Nucleic Acids Res. 2022 Nov 11; 50(20): 11916–11923. Published online 2022 Oct 20. doi: 10.1093/nar/gkac910
PMCID:
PMC9723636
AbstractArticlePDF–4.4M
9.
The nucleoplasmic phase of pre-40S formation prior to nuclear export
Jingdong Cheng, Benjamin Lau, Matthias Thoms, Michael Ameismeier, Otto Berninghausen, Ed Hurt, Roland Beckmann
Nucleic Acids Res. 2022 Nov 11; 50(20): 11924–11937. Published online 2022 Nov 2. doi: 10.1093/nar/gkac961
PMCID:
PMC9723619
AbstractArticlePDF–11M
10.
A proteomic screen of Ty1 integrase partners identifies the protein kinase CK2 as a regulator of Ty1 retrotransposition
Anastasia Barkova, Indranil Adhya, Christine Conesa, Amna Asif-Laidin, Amandine Bonnet, Elise Rabut, Carine Chagneau, Pascale Lesage, Joël Acker
Mob DNA. 2022; 13: 26. Published online 2022 Nov 18. doi: 10.1186/s13100-022-00284-0
PMCID:
PMC9673352
AbstractArticlePDF–2.6M
11.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
12.
Regulation of translation by methylation multiplicity of 18S rRNA
Kuanqing Liu, Daniel A. Santos, Jeffrey A. Hussmann, Yun Wang, Benjamin M. Sutter, Jonathan S. Weissman, Benjamin P. Tu
Cell Rep. Author manuscript; available in PMC 2021 Apr 23.
Published in final edited form as: Cell Rep. 2021 Mar 9; 34(10): 108825. doi: 10.1016/j.celrep.2021.108825
PMCID:
PMC8063911
AbstractArticlePDF–2.1M
13.
An open interface in the pre-80S ribosome coordinated by ribosome assembly factors Tsr1 and Dim1 enables temporal regulation of Fap7
Jay Rai, Melissa D. Parker, Haina Huang, Stefan Choy, Homa Ghalei, Matthew C. Johnson, Katrin Karbstein, M. Elizabeth Stroupe
RNA. 2021 Feb; 27(2): 221–233. doi: 10.1261/rna.077610.120
PMCID:
PMC7812869
AbstractArticlePDF–17M
14.
Bud23 promotes the final disassembly of the small subunit Processome in Saccharomyces cerevisiae
Joshua J. Black, Richa Sardana, Ezzeddine W. Elmir, Arlen W. Johnson
PLoS Genet. 2020 Dec; 16(12): e1009215. Published online 2020 Dec 11. doi: 10.1371/journal.pgen.1009215
PMCID:
PMC7758049
AbstractArticlePDF–4.9M
15.
Chaperone-Mediated Protein Disaggregation Triggers Proteolytic Clearance of Intra-nuclear Protein Inclusions
Fabian den Brave, Lucas V. Cairo, Chandhuru Jagadeesan, Carmen Ruger-Herreros, Axel Mogk, Bernd Bukau, Stefan Jentsch
Cell Rep. 2020 Jun 2; 31(9): 107680. Published online 2020 Jun 2. doi: 10.1016/j.celrep.2020.107680
PMCID:
PMC7273177
AbstractArticle
16.
Tsr4 and Nap1, two novel members of the ribosomal protein chaperOME
Ingrid Rössler, Julia Embacher, Benjamin Pillet, Guillaume Murat, Laura Liesinger, Jutta Hafner, Julia Judith Unterluggauer, Ruth Birner-Gruenberger, Dieter Kressler, Brigitte Pertschy
Nucleic Acids Res. 2019 Jul 26; 47(13): 6984–7002. Published online 2019 May 7. doi: 10.1093/nar/gkz317
PMCID:
PMC6648895
AbstractArticlePDF–14M
17.
Impact of two neighbouring ribosomal protein clusters on biogenesis factor binding and assembly of yeast late small ribosomal subunit precursors
Jan Linnemann, Gisela Pöll, Steffen Jakob, Sébastien Ferreira-Cerca, Joachim Griesenbeck, Herbert Tschochner, Philipp Milkereit
PLoS One. 2019; 14(1): e0203415. Published online 2019 Jan 17. doi: 10.1371/journal.pone.0203415
PMCID:
PMC6336269
AbstractArticlePDF–2.2M
18.
Nonsense‐mediated mRNA decay involves two distinct Upf1‐bound complexes
Marine Dehecq, Laurence Decourty, Abdelkader Namane, Caroline Proux, Joanne Kanaan, Hervé Le Hir, Alain Jacquier, Cosmin Saveanu
EMBO J. 2018 Nov 2; 37(21): e99278. Published online 2018 Oct 1. doi: 10.15252/embj.201899278
PMCID:
PMC6213285
AbstractArticlePDF–1.2M
19.
The ATPase Fap7 Tests the Ability to Carry Out Translocation-Like Conformational Changes and Releases Dim1 During 40S Ribosome Maturation.
Homa Ghalei, Juliette Trepreau, Jason C. Collins, Hari Bhaskaran, Bethany S. Strunk, Katrin Karbstein
Mol Cell. Author manuscript; available in PMC 2018 Oct 17.
Published in final edited form as: Mol Cell. 2017 Sep 21; 67(6): 990–1000.e3. Published online 2017 Sep 7. doi: 10.1016/j.molcel.2017.08.007
Correction in:
Mol Cell. 2017 Dec 21; 68(6): 1155.
PMCID:
PMC6192259
AbstractArticlePDF–1.0M
20.
Utp14 interaction with the small subunit processome
Joshua J. Black, Zhaohui Wang, Lisa M. Goering, Arlen W. Johnson
RNA. 2018 Sep; 24(9): 1214–1228. doi: 10.1261/rna.066373.118
PMCID:
PMC6097655
AbstractArticlePDF–11M

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