PMC Links for GEO Profiles (Select 99306812) - PMC

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Items: 14

Select item 108029521.

Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly

Marcos Schaan Profes, Araven Tiroumalechetty, Neel Patel, Stephanie S. Lauar, Simone Sidoli, Peri T. Kurshan

PLoS Biol. 2024 Jan; 22(1): e3002466. Published online 2024 Jan 22. doi: 10.1371/journal.pbio.3002466

PMCID:: PMC10802952

Abstract Article PDF–2.7M

Select item 106176262.

SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans

Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino

Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755

PMCID:: PMC10617626

Abstract Article

Select item 103207663.

A transcriptional cofactor regulatory network for the C. elegans intestine

Brent B Horowitz, Shivani Nanda, Albertha J M Walhout

G3 (Bethesda) 2023 Jul; 13(7): jkad096. Published online 2023 Apr 29. doi: 10.1093/g3journal/jkad096

PMCID:: PMC10320766

Abstract Article PDF–1.9M

Select item 93488484.

Maternal H3K36 and H3K27 HMTs protect germline development via regulation of the transcription factor LIN-15B

Chad Steven Cockrum, Susan Strome

eLife. 2022; 11: e77951. Published online 2022 Aug 3. doi: 10.7554/eLife.77951

PMCID:: PMC9348848

Abstract Article PDF–2.7M

Select item 83311835.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 79951766.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 76132587.

Gene expression profiling of epidermal cell types in C. elegans using Targeted DamID

Dimitris Katsanos, Mar Ferrando-Marco, Iqrah Razzaq, Gabriel Aughey, Tony D. Southall, Michalis Barkoulas

Development. 2021 Sep 1; 148(17): dev199452. Published online 2021 Sep 3. doi: 10.1242/dev.199452

PMCID:: PMC7613258

Abstract Article

Select item 62165908.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 45739029.

The Regulatory Landscape of Lineage Differentiation in a Metazoan Embryo

Zhuo Du, Anthony Santella, Fei He, Pavak K. Shah, Yuko Kamikawa, Zhirong Bao

Dev Cell. Author manuscript; available in PMC 2016 Sep 14.

Published in final edited form as: Dev Cell. 2015 Sep 14; 34(5): 592–607. Published online 2015 Aug 27. doi: 10.1016/j.devcel.2015.07.014

PMCID:: PMC4573902

Abstract Article PDF–2.6M

Select item 436420110.

SWI/SNF chromatin remodeling regulates alcohol response behaviors in Caenorhabditis elegans and is associated with alcohol dependence in humans

Laura D. Mathies, GinaMari G. Blackwell, Makeda K. Austin, Alexis C. Edwards, Brien P. Riley, Andrew G. Davies, Jill C. Bettinger

Proc Natl Acad Sci U S A. 2015 Mar 10; 112(10): 3032–3037. Published online 2015 Feb 23. doi: 10.1073/pnas.1413451112

PMCID:: PMC4364201

Abstract Article PDF–862K

Select item 395804611.

The Conserved PBAF Nucleosome-Remodeling Complex Mediates the Response to Stress in Caenorhabditis elegans

Aleksandra Kuzmanov, Evguenia I. Karina, Natalia V. Kirienko, David S. Fay

Mol Cell Biol. 2014 Mar; 34(6): 1121–1135. doi: 10.1128/MCB.01502-13

PMCID:: PMC3958046

Abstract Article PDF–2.8M

Select item 310207712.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 269436313.

An Integrated Strategy to Study Muscle Development and Myofilament Structure in Caenorhabditis elegans

Barbara Meissner, Adam Warner, Kim Wong, Nicholas Dube, Adam Lorch, Sheldon J. McKay, Jaswinder Khattra, Teresa Rogalski, Aruna Somasiri, Iasha Chaudhry, Rebecca M. Fox, David M. Miller, III, David L. Baillie, Robert A. Holt, Steven J. M. Jones, Marco A. Marra, Donald G. Moerman

PLoS Genet. 2009 Jun; 5(6): e1000537. Published online 2009 Jun 26. doi: 10.1371/journal.pgen.1000537