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Select item 106176261.

SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans

Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino

Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755

PMCID:: PMC10617626

Abstract Article

Select item 100313092.

kin-3 genetically suppresses sur-6 in centrosome assembly during Caenorhabditis elegans embryogenesis

Jeffrey C. Medley, Mi Hye Song

MicroPubl Biol. 2023; 2023: 10.17912/micropub.biology.000791. Published online 2023 Mar 7. doi: 10.17912/micropub.biology.000791

PMCID:: PMC10031309

Abstract Article PDF–930K

Select item 94378483.

Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans

Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono

J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343

PMCID:: PMC9437848

Abstract Article PDF–2.0M

Select item 93032664.

A novel, essential trans-splicing protein connects the nematode SL1 snRNP to the CBC-ARS2 complex

Rotimi Yemi Fasimoye, Rosie Elizabeth Barker Spencer, Eva Soto-Martin, Peter Eijlers, Haitem Elmassoudi, Sarah Brivio, Carolina Mangana, Viktorija Sabele, Radoslava Rechtorikova, Marius Wenzel, Bernadette Connolly, Jonathan Pettitt, Berndt Müller

Nucleic Acids Res. 2022 Jul 22; 50(13): 7591–7607. Published online 2022 Jun 23. doi: 10.1093/nar/gkac534

PMCID:: PMC9303266

Abstract Article PDF–5.5M

Select item 91715545.

The C. elegans Casein Kinase II is associated with meiotic DNA in fertilized oocytes

Nahyun Yim, Jeffrey C. Medley, Mi Hye Song

MicroPubl Biol. 2022; 2022: 10.17912/micropub.biology.000583. Published online 2022 Jun 6. doi: 10.17912/micropub.biology.000583

PMCID:: PMC9171554

Abstract Article PDF–7.7M

Select item 84467936.

Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling

Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono

J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094

Correction in:: J Biol Chem. 2022 Jun; 298(6): 102081.

PMCID:: PMC8446793

Abstract Article PDF–1.6M

Select item 83311837.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 80806628.

A survey of the kinome pharmacopeia reveals multiple scaffolds and targets for the development of novel anthelmintics

Jessica Knox, Nicolas Joly, Edmond M. Linossi, José A. Carmona-Negrón, Natalia Jura, Lionel Pintard, William Zuercher, Peter J. Roy

Sci Rep. 2021; 11: 9161. Published online 2021 Apr 28. doi: 10.1038/s41598-021-88150-6

PMCID:: PMC8080662

Abstract Article PDF–4.3M

Select item 79951769.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 780860410.

CLK-2/TEL2 is a conserved component of the nonsense-mediated mRNA decay pathway

Yanwu Guo, Cristina Tocchini, Rafal Ciosk

PLoS One. 2021; 16(1): e0244505. Published online 2021 Jan 14. doi: 10.1371/journal.pone.0244505

PMCID:: PMC7808604

Abstract Article PDF–1.9M

Select item 682915011.

A Screen of the Conserved Kinome for Negative Regulators of LIN-12 Negative Regulatory Region (“NRR”)-Missense Activity in Caenorhabditis elegans

Yuting Deng, Katherine Leisan Luo, Daniel D. Shaye, Iva Greenwald

G3 (Bethesda) 2019 Nov; 9(11): 3567–3574. Published online 2019 Sep 13. doi: 10.1534/g3.119.400471

PMCID:: PMC6829150

Abstract Article PDF–1.1M

Select item 631731512.

The USTC co-opts an ancient machinery to drive piRNA transcription in C. elegans

Chenchun Weng, Joanna Kosalka, Ahmet C. Berkyurek, Przemyslaw Stempor, Xuezhu Feng, Hui Mao, Chenming Zeng, Wen-Jun Li, Yong-Hong Yan, Meng-Qiu Dong, Natalia Rosalía Morero, Cecilia Zuliani, Orsolya Barabas, Julie Ahringer, Shouhong Guang, Eric A. Miska

Genes Dev. 2019 Jan 1; 33(1-2): 90–102. doi: 10.1101/gad.319293.118

PMCID:: PMC6317315

Abstract Article PDF–3.3M

Select item 621659013.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 530527014.

β-Integrin de-phosphorylation by the Density-Enhanced Phosphatase DEP-1 attenuates EGFR signaling in C. elegans

Michael Walser, Christoph Alois Umbricht, Erika Fröhli, Paolo Nanni, Alex Hajnal

PLoS Genet. 2017 Jan; 13(1): e1006592. Published online 2017 Jan 30. doi: 10.1371/journal.pgen.1006592

PMCID:: PMC5305270

Abstract Article PDF–2.8M

Select item 527843315.

Casein kinase II is required for proper cell division and acts as a negative regulator of centrosome duplication in Caenorhabditiselegans embryos

Jeffrey C. Medley, Megan M. Kabara, Michael D. Stubenvoll, Lauren E. DeMeyer, Mi Hye Song

Biol Open. 2017 Jan 15; 6(1): 17–28. Published online 2016 Nov 23. doi: 10.1242/bio.022418

PMCID:: PMC5278433

Abstract Article PDF–3.5M

Select item 494261216.

The RNA-binding protein repertoire of Arabidopsis thaliana

Claudius Marondedze, Ludivine Thomas, Natalia L. Serrano, Kathryn S. Lilley, Chris Gehring

Sci Rep. 2016; 6: 29766. Published online 2016 Jul 11. doi: 10.1038/srep29766

PMCID:: PMC4942612

Abstract Article PDF–1.2M

Select item 478092917.

Genomic overview of protein kinases.

Gerard Manning

WormBook. 2005 : 1–19. Published online 2005 Dec 13. doi: 10.1895/wormbook.1.60.1

PMCID:: PMC4780929

Abstract Article

Select item 470298618.

Casein kinase II promotes target silencing by miRISC through direct phosphorylation of the DEAD-box RNA helicase CGH-1

Amelia F. Alessi, Vishal Khivansara, Ting Han, Mallory A. Freeberg, James J. Moresco, Patricia G. Tu, Eric Montoye, John R. Yates, III, Xantha Karp, John K. Kim

Proc Natl Acad Sci U S A. 2015 Dec 29; 112(52): E7213–E7222. Published online 2015 Dec 15. doi: 10.1073/pnas.1509499112

Correction in:: Proc Natl Acad Sci U S A. 2016 Feb 16; 113(7): E942.

PMCID:: PMC4702986

Abstract Article PDF–1.4M

Select item 367501119.

RSR-2, the Caenorhabditis elegans Ortholog of Human Spliceosomal Component SRm300/SRRM2, Regulates Development by Influencing the Transcriptional Machinery

Laura Fontrodona, Montserrat Porta-de-la-Riva, Tomás Morán, Wei Niu, Mònica Díaz, David Aristizábal-Corrales, Alberto Villanueva, Simó Schwartz, Jr, Valerie Reinke, Julián Cerón

PLoS Genet. 2013 Jun; 9(6): e1003543. Published online 2013 Jun 6. doi: 10.1371/journal.pgen.1003543