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Items: 1 to 20 of 75

1.
High-Temporal-Resolution smFISH Method for Gene Expression Studies in Caenorhabditis elegans Embryos
Seleipiri Charles, Guillaume Aubry, Han-Ting Chou, Annalise B. Paaby, Hang Lu
Anal Chem. Author manuscript; available in PMC 2023 Nov 1.
Published in final edited form as: Anal Chem. 2021 Jan 26; 93(3): 1369–1376. Published online 2020 Dec 23. doi: 10.1021/acs.analchem.0c02966
PMCID:
PMC10619480
AbstractArticlePDF–1.2M
2.
Beyond the reference: gene expression variation and transcriptional response to RNA interference in Caenorhabditis elegans
Avery Davis Bell, Han Ting Chou, Francisco Valencia, Annalise B Paaby
G3 (Bethesda) 2023 Aug; 13(8): jkad112. Published online 2023 May 23. doi: 10.1093/g3journal/jkad112
PMCID:
PMC10411595
AbstractArticlePDF–404K
3.
Design principles for selective polarization of PAR proteins by cortical flows
Rukshala Illukkumbura, Nisha Hirani, Joana Borrego-Pinto, Tom Bland, KangBo Ng, Lars Hubatsch, Jessica McQuade, Robert G. Endres, Nathan W. Goehring
J Cell Biol. 2023 Aug 7; 222(8): e202209111. Published online 2023 Jun 2. doi: 10.1083/jcb.202209111
PMCID:
PMC10238861
AbstractArticlePDF–5.7M
4.
SAIBR: a simple, platform-independent method for spectral autofluorescence correction
Nelio T. L. Rodrigues, Tom Bland, Joana Borrego-Pinto, KangBo Ng, Nisha Hirani, Ying Gu, Sherman Foo, Nathan W. Goehring
Development. 2022 Jul 15; 149(14): dev200545. Published online 2022 Jul 14. doi: 10.1242/dev.200545
PMCID:
PMC9445497
AbstractArticle
5.
Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans
Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono
J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343
PMCID:
PMC9437848
AbstractArticlePDF–2.0M
6.
Stability selection enables robust learning of differential equations from limited noisy data
Suryanarayana Maddu, Bevan L. Cheeseman, Ivo F. Sbalzarini, Christian L. Müller
Proc Math Phys Eng Sci. June 2022; 478(2262): 20210916. Published online June 15, 2022. doi: 10.1098/rspa.2021.0916
PMCID:
PMC9199075
AbstractArticlePDF–1.9M
7.
Perspectives on Mechanisms Supporting Neuronal Polarity From Small Animals to Humans
Carlos Wilson, Ana Lis Moyano, Alfredo Cáceres
Front Cell Dev Biol. 2022; 10: 878142. Published online 2022 Apr 19. doi: 10.3389/fcell.2022.878142
PMCID:
PMC9062071
AbstractArticlePDF–2.1M
8.
Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling
Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono
J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094
Correction in:
J Biol Chem. 2022 Jun; 298(6): 102081.
PMCID:
PMC8446793
AbstractArticlePDF–1.6M
9.
Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules
Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus
eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833
PMCID:
PMC8331183
AbstractArticlePDF–8.5M
10.
Interactions between the WEE-1.3 kinase and the PAM-1 aminopeptidase in oocyte maturation and the early C. elegans embryo
Dorothy Benton, Eva C Jaeger, Arielle Kilner, Ashley Kimble, Josh Lowry, Emily M Schleicher, Kaiden M Power, Danielle Uibel, Caprice Eisele, Bruce Bowerman, Rebecca Lyczak
G3 (Bethesda) 2021 Apr; 11(4): jkab063. Published online 2021 Mar 3. doi: 10.1093/g3journal/jkab063
PMCID:
PMC8049411
AbstractArticlePDF–1.0M
11.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
12.
Inhibition of PAR-1 delays aging via activating AMPK in C. elegans
Di Wu, Waijiao Cai, Xuan Zhang, Jianfeng Lan, Lina Zou, Samuel J. Chen, Zixing Wu, Di Chen
Aging (Albany NY) 2020 Dec 31; 12(24): 25700–25717. Published online 2020 Nov 20. doi: 10.18632/aging.104180
PMCID:
PMC7803586
AbstractArticlePDF–1.6M
13.
Epidermal PAR-6 and PKC-3 are essential for larval development of C. elegans and organize non-centrosomal microtubules
Victoria G Castiglioni, Helena R Pires, Rodrigo Rosas Bertolini, Amalia Riga, Jana Kerver, Mike Boxem
eLife. 2020; 9: e62067. Published online 2020 Dec 10. doi: 10.7554/eLife.62067
PMCID:
PMC7755398
AbstractArticlePDF–3.7M
14.
Roles of Actin in the Morphogenesis of the Early Caenorhabditis elegans Embryo
Dureen Samandar Eweis, Julie Plastino
Int J Mol Sci. 2020 May; 21(10): 3652. Published online 2020 May 21. doi: 10.3390/ijms21103652
PMCID:
PMC7279410
AbstractArticlePDF–623K
15.
Spatial regulation of the polarity kinase PAR-1 by parallel inhibitory mechanisms
Andrew W. Folkmann, Geraldine Seydoux
Development. 2019 Mar 15; 146(6): dev171116. Published online 2019 Mar 25. doi: 10.1242/dev.171116
PMCID:
PMC6451319
AbstractArticle
16.
Fasciculation and elongation zeta proteins 1 and 2: From structural flexibility to functional diversity
Mariana Bertini Teixeira, Marcos Rodrigo Alborghetti, Jörg Kobarg
World J Biol Chem. 2019 Feb 21; 10(2): 28–43. Published online 2019 Feb 21. doi: 10.4331/wjbc.v10.i2.28
PMCID:
PMC6388297
AbstractArticlePDF–2.0M
17.
The kinases PIG-1 and PAR-1 act in redundant pathways to regulate asymmetric division in the EMS blastomere of C. elegans
Małgorzata J. Liro, Diane G. Morton, Lesilee S. Rose
Dev Biol. Author manuscript; available in PMC 2019 Dec 1.
Published in final edited form as: Dev Biol. 2018 Dec 1; 444(1): 9–19. Published online 2018 Sep 10. doi: 10.1016/j.ydbio.2018.08.016
PMCID:
PMC6238631
AbstractArticlePDF–2.1M
18.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
19.
aPKC: the Kinase that Phosphorylates Cell Polarity
Yang Hong
Version 1. F1000Res. 2018; 7: F1000 Faculty Rev-903. Published online 2018 Jun 25. doi: 10.12688/f1000research.14427.1
PMCID:
PMC6020718
AbstractArticlePDF–883K
20.
Dynamic opposition of clustered proteins stabilizes cortical polarity in the C. elegans zygote
Anne Sailer, Alexander Anneken, Younan Li, Sam Lee, Edwin Munro
Dev Cell. Author manuscript; available in PMC 2018 May 22.
Published in final edited form as: Dev Cell. 2015 Oct 12; 35(1): 131–142. doi: 10.1016/j.devcel.2015.09.006
PMCID:
PMC5963695
AbstractArticlePDF–3.1M

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